Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_A10
         (1178 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022850-1|AAY55266.1|  538|Drosophila melanogaster IP13040p pro...    32   1.3  
AE013599-1243|AAF58688.1|  610|Drosophila melanogaster CG13214-P...    32   1.3  

>BT022850-1|AAY55266.1|  538|Drosophila melanogaster IP13040p protein.
          Length = 538

 Score = 32.3 bits (70), Expect = 1.3
 Identities = 15/38 (39%), Positives = 15/38 (39%)
 Frame = -3

Query: 1008 GXXWGXGSFXGXXGXRXQKXXPRGPGGAXXGGXXGVGG 895
            G   G G F G  G       P  PGG   GG  G GG
Sbjct: 303  GGQGGGGGFGGGGGRGGAPGAPGSPGGGGYGGQGGAGG 340



 Score = 31.9 bits (69), Expect = 1.8
 Identities = 16/41 (39%), Positives = 16/41 (39%)
 Frame = -3

Query: 1008 GXXWGXGSFXGXXGXRXQKXXPRGPGGAXXGGXXGVGG*AG 886
            G   G G F G  G       P  PGG   GG  G GG  G
Sbjct: 369  GGQGGGGGFGGGGGRGGAPGAPGSPGGGGFGGQGGGGGYGG 409



 Score = 29.5 bits (63), Expect = 9.4
 Identities = 14/38 (36%), Positives = 14/38 (36%)
 Frame = -3

Query: 1008 GXXWGXGSFXGXXGXRXQKXXPRGPGGAXXGGXXGVGG 895
            G   G G   G  G       P  PGG   GG  G GG
Sbjct: 238  GGGGGYGGAGGGAGRGGSPGGPGSPGGGGFGGQGGAGG 275


>AE013599-1243|AAF58688.1|  610|Drosophila melanogaster CG13214-PA,
            isoform A protein.
          Length = 610

 Score = 32.3 bits (70), Expect = 1.3
 Identities = 15/38 (39%), Positives = 15/38 (39%)
 Frame = -3

Query: 1008 GXXWGXGSFXGXXGXRXQKXXPRGPGGAXXGGXXGVGG 895
            G   G G F G  G       P  PGG   GG  G GG
Sbjct: 375  GGQGGGGGFGGGGGRGGAPGAPGSPGGGGYGGQGGAGG 412



 Score = 31.9 bits (69), Expect = 1.8
 Identities = 16/41 (39%), Positives = 16/41 (39%)
 Frame = -3

Query: 1008 GXXWGXGSFXGXXGXRXQKXXPRGPGGAXXGGXXGVGG*AG 886
            G   G G F G  G       P  PGG   GG  G GG  G
Sbjct: 441  GGQGGGGGFGGGGGRGGAPGAPGSPGGGGFGGQGGGGGYGG 481



 Score = 29.5 bits (63), Expect = 9.4
 Identities = 14/38 (36%), Positives = 14/38 (36%)
 Frame = -3

Query: 1008 GXXWGXGSFXGXXGXRXQKXXPRGPGGAXXGGXXGVGG 895
            G   G G   G  G       P  PGG   GG  G GG
Sbjct: 310  GGGGGYGGAGGGAGRGGSPGGPGSPGGGGFGGQGGAGG 347


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,080,555
Number of Sequences: 53049
Number of extensions: 691606
Number of successful extensions: 3119
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2730
length of database: 24,988,368
effective HSP length: 86
effective length of database: 20,426,154
effective search space used: 6250403124
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)