Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_A05
         (895 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0686 - 30900748-30902167,30903442-30904742                       29   5.0  
01_05_0490 + 22672241-22674679                                         29   5.0  
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    29   6.6  
06_03_1155 - 28065126-28065139,28065268-28065324,28065571-28066312     29   6.6  
06_03_1150 + 28022633-28023374,28023501-28023565                       29   6.6  
02_05_0543 + 29872168-29872767,29873089-29873115                       28   8.7  

>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 14/32 (43%), Positives = 14/32 (43%)
 Frame = +3

Query: 669 PXQKKXPHPPXEKGVLXXWGPXPXSPPXPKPP 764
           P  K  P PP  KG      P   SPP P PP
Sbjct: 339 PPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPP 370


>01_05_0490 + 22672241-22674679
          Length = 812

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = +3

Query: 669 PXQKKXPHPPXEKGVLXXWGPXPXSPPXPKPPXXP 773
           P Q++ P  P    V   +   P SPP P PP  P
Sbjct: 669 PPQQQPPFYPRRAVVYYTYPLPPPSPPLPPPPPPP 703


>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = +3

Query: 687 PHPPXEKGVLXXWGPXPXSPPXPKPP 764
           P PP   G    + P P  PP P PP
Sbjct: 549 PPPPPPSGNKPAFSPPPPPPPPPPPP 574


>06_03_1155 - 28065126-28065139,28065268-28065324,28065571-28066312
          Length = 270

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 17/52 (32%), Positives = 18/52 (34%), Gaps = 2/52 (3%)
 Frame = +3

Query: 624 PFXXPXSXGXG--GXVFPXQKKXPHPPXEKGVLXXWGPXPXSPPXPKPPXXP 773
           P   P S G G     FP       PP +        P P SPP PK    P
Sbjct: 117 PGGAPPSSGSGFPAFPFPFPSSPVSPPSQASPASPAAPAPPSPPQPKECLTP 168


>06_03_1150 + 28022633-28023374,28023501-28023565
          Length = 268

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 17/52 (32%), Positives = 18/52 (34%), Gaps = 2/52 (3%)
 Frame = +3

Query: 624 PFXXPXSXGXG--GXVFPXQKKXPHPPXEKGVLXXWGPXPXSPPXPKPPXXP 773
           P   P S G G     FP       PP +        P P SPP PK    P
Sbjct: 117 PGGAPPSSGSGFPAFPFPFPSSPVSPPSQASPASPAAPAPPSPPQPKECLTP 168


>02_05_0543 + 29872168-29872767,29873089-29873115
          Length = 208

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +3

Query: 723 WGPXPXSPPXPKPPXXP 773
           WG  P +PP P PP  P
Sbjct: 175 WGESPAAPPPPPPPPPP 191


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,222,074
Number of Sequences: 37544
Number of extensions: 160790
Number of successful extensions: 1151
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1031
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)