Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_A02
(896 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50311-12|AAA92315.1| 169|Caenorhabditis elegans Hypothetical p... 38 0.007
U42830-3|AAC48275.1| 195|Caenorhabditis elegans Hypothetical pr... 33 0.21
Z82093-3|CAB05020.1| 222|Caenorhabditis elegans Hypothetical pr... 32 0.48
Z81573-3|CAB04624.3| 398|Caenorhabditis elegans Hypothetical pr... 32 0.64
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 32 0.64
Z70212-9|CAA94168.1| 491|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z50742-6|CAA90619.1| 491|Caenorhabditis elegans Hypothetical pr... 30 2.0
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 2.0
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 2.0
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 2.0
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 29 4.5
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 29 4.5
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 29 4.5
Z83232-3|CAE46672.1| 381|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z83232-2|CAB05754.2| 420|Caenorhabditis elegans Hypothetical pr... 29 6.0
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 28 7.9
U07628-1|AAA17738.1| 515|Caenorhabditis elegans APX-1 protein. 28 7.9
AF101319-2|AAC69353.4| 515|Caenorhabditis elegans Anterior phar... 28 7.9
>U50311-12|AAA92315.1| 169|Caenorhabditis elegans Hypothetical
protein C25E10.10 protein.
Length = 169
Score = 38.3 bits (85), Expect = 0.007
Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = +1
Query: 145 PTRKCP-KGEHSVLYCPQMAEPDC--ENPEVHDFVDHVGPCDVPQCFCDRPNVRNTKTGK 315
P RK +G+ + C EP C ENPE D V C C C + VR++ TGK
Sbjct: 71 PIRKPECEGDEELKACGSACEPTCDNENPEC-DLV-----CMTNVCQCKKGLVRDSATGK 124
Query: 316 CVPESEC 336
CV +++C
Sbjct: 125 CVEKNKC 131
>U42830-3|AAC48275.1| 195|Caenorhabditis elegans Hypothetical
protein C53B7.2 protein.
Length = 195
Score = 33.5 bits (73), Expect = 0.21
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +1
Query: 187 CPQMAEPDCENPEVHDFVDHVGPCDVPQCFCDRPNVRNTKTGKCVPESEC 336
C QM P CE+P VD C P C C P + + +C+P + C
Sbjct: 38 CTQMCPPTCESPNPQCRVD----CTRPSCTC-LPGHVYSNSRQCIPANSC 82
>Z82093-3|CAB05020.1| 222|Caenorhabditis elegans Hypothetical
protein ZK39.4 protein.
Length = 222
Score = 32.3 bits (70), Expect = 0.48
Identities = 15/28 (53%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = -2
Query: 721 SVEGGXGDGXXXG-PPGGGXNXXXGXQW 641
S EGG G G G PPGGG N G W
Sbjct: 27 SCEGGRGGGNGGGRPPGGGANGGCGAGW 54
>Z81573-3|CAB04624.3| 398|Caenorhabditis elegans Hypothetical
protein M02G9.2 protein.
Length = 398
Score = 31.9 bits (69), Expect = 0.64
Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 1/89 (1%)
Frame = +1
Query: 91 IVLLFVVAAVGYVTGQHFPTR-KCPKGEHSVLYCPQMAEPDCENPEVHDFVDHVGPCDVP 267
+V FV+A+V + + C GE C M P+ ++ + P P
Sbjct: 7 LVAFFVIASVQAIPQRTKRQNCDCTPGEAPKCGCQVMPTPEIGGGQM---ICTCSPPVPP 63
Query: 268 QCFCDRPNVRNTKTGKCVPESEC**NCVN 354
+C C NVRN TG +P NCV+
Sbjct: 64 KCVCTEGNVRNIITGPSLPALFKPYNCVS 92
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 31.9 bits (69), Expect = 0.64
Identities = 16/41 (39%), Positives = 17/41 (41%), Gaps = 3/41 (7%)
Frame = +3
Query: 651 PXSXXSPPPGGPXXXPSPXPPS---TELRAXPPGGXGRFSP 764
P PPPGGP S PP PPGG G + P
Sbjct: 406 PGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGP 446
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +3
Query: 636 PXHXXPXSXXSPPPGGPXXXPSPXPPSTELRAXPPGGXG 752
P P PPPGGP P + A PPG G
Sbjct: 425 PPQGGPGGFGPPPPGGPGAYGPPPTGFPPVGAPPPGAAG 463
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +3
Query: 636 PXHXXPXSXXSPPPGGPXXXPSPXPPSTELRAXPPGGXGRFSP 764
P P + PP GP +P PPS PGG G + P
Sbjct: 370 PVSSAPGNFAPPPQSGPPGAFAP-PPSAFGAPQGPGGPGGYGP 411
>Z70212-9|CAA94168.1| 491|Caenorhabditis elegans Hypothetical
protein R04D3.1 protein.
Length = 491
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 79 MKSFIVLLFVVAAVGYVTGQHFPTRKCPKG 168
M ++L F VA VGY+ + RK PKG
Sbjct: 1 MSPLLILAFFVATVGYLVHFYLKVRKYPKG 30
>Z50742-6|CAA90619.1| 491|Caenorhabditis elegans Hypothetical
protein R04D3.1 protein.
Length = 491
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 79 MKSFIVLLFVVAAVGYVTGQHFPTRKCPKG 168
M ++L F VA VGY+ + RK PKG
Sbjct: 1 MSPLLILAFFVATVGYLVHFYLKVRKYPKG 30
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/46 (32%), Positives = 18/46 (39%)
Frame = +3
Query: 630 LTPXHXXPXSXXSPPPGGPXXXPSPXPPSTELRAXPPGGXGRFSPL 767
L P P PP G P P P P + PP G F+P+
Sbjct: 751 LPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPM 796
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/46 (32%), Positives = 18/46 (39%)
Frame = +3
Query: 630 LTPXHXXPXSXXSPPPGGPXXXPSPXPPSTELRAXPPGGXGRFSPL 767
L P P PP G P P P P + PP G F+P+
Sbjct: 751 LPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPM 796
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/46 (32%), Positives = 18/46 (39%)
Frame = +3
Query: 630 LTPXHXXPXSXXSPPPGGPXXXPSPXPPSTELRAXPPGGXGRFSPL 767
L P P PP G P P P P + PP G F+P+
Sbjct: 334 LPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPM 379
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +3
Query: 651 PXSXXSPPPGGPXXXPSPX-PPSTELRAXPPGGXG 752
P + P P GP P P PP + ++ PPG G
Sbjct: 238 PGNDGPPGPPGPKGAPGPDGPPGVDGQSGPPGPPG 272
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +3
Query: 651 PXSXXSPPPGGPXXXPSPX-PPSTELRAXPPGGXG 752
P + P P GP P P PP + ++ PPG G
Sbjct: 233 PGNDGPPGPPGPKGAPGPDGPPGADGQSGPPGPPG 267
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +3
Query: 651 PXSXXSPPPGGPXXXPSPX-PPSTELRAXPPGGXG 752
P + P P GP P P PP + ++ PPG G
Sbjct: 233 PGNDGPPGPPGPKGAPGPDGPPGADGQSGPPGPPG 267
>Z83232-3|CAE46672.1| 381|Caenorhabditis elegans Hypothetical
protein K04B12.2b protein.
Length = 381
Score = 28.7 bits (61), Expect = 6.0
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +3
Query: 66 ENVSNEKFYCIVVCCGSCRLRHRATFS 146
+N+ +E+F+C+ CC RL T++
Sbjct: 196 KNLLDEEFFCLAPCCSGMRLFQAETYT 222
>Z83232-2|CAB05754.2| 420|Caenorhabditis elegans Hypothetical
protein K04B12.2a protein.
Length = 420
Score = 28.7 bits (61), Expect = 6.0
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +3
Query: 66 ENVSNEKFYCIVVCCGSCRLRHRATFS 146
+N+ +E+F+C+ CC RL T++
Sbjct: 235 KNLLDEEFFCLAPCCSGMRLFQAETYT 261
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = +3
Query: 642 HXXPXSXXSPPPGGPXXXPSPXPPSTELRAXPPGGXGRF 758
H P +PPPG P P P PPGG +F
Sbjct: 437 HGAPGGSGAPPPGPPGAYPGNGAPG-----GPPGGPPQF 470
>U07628-1|AAA17738.1| 515|Caenorhabditis elegans APX-1 protein.
Length = 515
Score = 28.3 bits (60), Expect = 7.9
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Frame = +1
Query: 172 HSVLYCPQ-MAEPDCENPEVHDFVDHVGPCDVP-QCFCDRPNVRNTKTGKCVPESEC-** 342
H V C + DC NP + G C P QC C T+ +C+P + C
Sbjct: 158 HGVRRCSAGWSGEDCSNPICAGGCSNRGRCVAPNQCSC-ADGFNGTRCEQCLPRAGCVNG 216
Query: 343 NCVN 354
+CVN
Sbjct: 217 DCVN 220
>AF101319-2|AAC69353.4| 515|Caenorhabditis elegans Anterior pharynx
in excess protein1 protein.
Length = 515
Score = 28.3 bits (60), Expect = 7.9
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Frame = +1
Query: 172 HSVLYCPQ-MAEPDCENPEVHDFVDHVGPCDVP-QCFCDRPNVRNTKTGKCVPESEC-** 342
H V C + DC NP + G C P QC C T+ +C+P + C
Sbjct: 158 HGVRRCSAGWSGEDCSNPICAGGCSNRGRCVAPNQCSC-ADGFNGTRCEQCLPRAGCVNG 216
Query: 343 NCVN 354
+CVN
Sbjct: 217 DCVN 220
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,932,508
Number of Sequences: 27780
Number of extensions: 298552
Number of successful extensions: 1289
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1205
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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