Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_A02
         (896 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       27   0.31 
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    25   0.94 
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    23   2.9  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    23   2.9  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    23   2.9  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   3.8  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 26.6 bits (56), Expect = 0.31
 Identities = 13/39 (33%), Positives = 16/39 (41%)
 Frame = +3

Query: 651 PXSXXSPPPGGPXXXPSPXPPSTELRAXPPGGXGRFSPL 767
           P     PPPGGP   P    PS ++   P  G  +   L
Sbjct: 40  PNPSQGPPPGGPPGAPPSQNPS-QMMISPASGIHQMQQL 77


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 25.0 bits (52), Expect = 0.94
 Identities = 12/37 (32%), Positives = 13/37 (35%)
 Frame = +3

Query: 657 SXXSPPPGGPXXXPSPXPPSTELRAXPPGGXGRFSPL 767
           S   P    P   P P PP   LR  P    G   P+
Sbjct: 94  SEAEPGNNRPVYIPQPRPPHPRLRREPEAEPGNNRPV 130



 Score = 25.0 bits (52), Expect = 0.94
 Identities = 14/46 (30%), Positives = 15/46 (32%), Gaps = 2/46 (4%)
 Frame = +3

Query: 636 PXHXXPXSXXSPPPGG--PXXXPSPXPPSTELRAXPPGGXGRFSPL 767
           P H          PG   P   P P PP   LR  P    G   P+
Sbjct: 111 PPHPRLRREPEAEPGNNRPVYIPQPRPPHPRLRREPEAEPGNNRPV 156


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = -3

Query: 339 LTFRFRYTFASFRVPDIRPVAEALWYVAWAHVVNEIVDFGILTV-RLGHLRAIQ 181
           L F   Y    F  PD  P    ++++ W   VN  ++  I T+  L + RA +
Sbjct: 341 LPFFLMYVIVPF-CPDCCPSDRMVYFITWLGYVNSALNPLIYTIFNLDYRRAFR 393


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = -3

Query: 339 LTFRFRYTFASFRVPDIRPVAEALWYVAWAHVVNEIVDFGILTV-RLGHLRAIQ 181
           L F   Y    F  PD  P    ++++ W   VN  ++  I T+  L + RA +
Sbjct: 341 LPFFLMYVIVPF-CPDCCPSDRMVYFITWLGYVNSALNPLIYTIFNLDYRRAFR 393


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = -3

Query: 339 LTFRFRYTFASFRVPDIRPVAEALWYVAWAHVVNEIVDFGILTV-RLGHLRAIQ 181
           L F   Y    F  PD  P    ++++ W   VN  ++  I T+  L + RA +
Sbjct: 341 LPFFLMYVIVPF-CPDCCPSDRMVYFITWLGYVNSALNPLIYTIFNLDYRRAFR 393


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = +3

Query: 675 PGGPXXXPSPXPPSTELRAXPPGGXG 752
           PGG    PSP  PS+   +  P   G
Sbjct: 84  PGGGSSSPSPSSPSSFFSSVSPTSLG 109


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,094
Number of Sequences: 438
Number of extensions: 4392
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29025360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)