Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_P21
         (880 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0750 - 6315126-6315896,6316371-6316784                           34   0.13 
09_06_0317 - 22265786-22267618,22267874-22268446,22268546-222686...    30   2.8  
01_01_1013 - 8015552-8015613,8016898-8018035                           29   3.7  
12_02_1177 - 26708215-26708309,26708355-26708392,26708476-267095...    29   4.9  
01_06_1263 + 35840502-35841308,35841763-35841969,35842272-358423...    28   8.6  

>11_01_0750 - 6315126-6315896,6316371-6316784
          Length = 394

 Score = 34.3 bits (75), Expect = 0.13
 Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
 Frame = +1

Query: 379 LLNQRYAEFDPKFLTVANKIYVSDQYKLADAFSRTA-NLFRSEVDNINF-SAPKNAADII 552
           +L  R     P+ L  A  ++      L+  F   A N++ S     +F + P++A D I
Sbjct: 88  VLRDRSTSGGPR-LAFAGGVWADASRSLSPEFVGLAGNVYGSAAKKADFKNKPEDAPDQI 146

Query: 553 NRWADEQTQGHIKTPVSEDKIDPATG 630
           N W  + T+G + T +    ID  TG
Sbjct: 147 NSWVKDSTKGTVTTLLPAGTIDQNTG 172


>09_06_0317 -
           22265786-22267618,22267874-22268446,22268546-22268677,
           22268931-22269137,22269287-22269388,22270742-22271032
          Length = 1045

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -1

Query: 361 TLEPPLPQGFPLSLPWTVHRLQTRXK 284
           +L PPLP G PLS P+     QT  K
Sbjct: 751 SLRPPLPPGLPLSSPFVCPTTQTSEK 776


>01_01_1013 - 8015552-8015613,8016898-8018035
          Length = 399

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
 Frame = +3

Query: 207 ILKESYNLADDKNVIASPLGVMLL-LSLXRVWSRCTVQGRDKGNPWGRGGSRVN-THIRI 380
           I K  +++AD   ++ S    +L+  S+  +W+   V    +  PWG  G  V+ T +  
Sbjct: 153 ITKTIFHVADLHPIVGSDKAALLIYFSVPEIWATHVVDYPPRDRPWGGNGVVVHKTIVWW 212

Query: 381 IKSALRRIRPEILDCRQ*NIRFRPV 455
           +  +   +  +I   RQ N+RF P+
Sbjct: 213 VDLSYGLLSCDISARRQ-NLRFVPL 236


>12_02_1177 -
           26708215-26708309,26708355-26708392,26708476-26709563,
           26709826-26709945,26710018-26710098,26710696-26710812,
           26711122-26711904
          Length = 773

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 21/70 (30%), Positives = 28/70 (40%), Gaps = 4/70 (5%)
 Frame = +1

Query: 436 IYVSDQYKLADAFSRTANLFRS--EVDNINFSAPKNAADIINRWAD--EQTQGHIKTPVS 603
           I + D Y+ A  F    N+F      DN  +   K       +W    E   G+     +
Sbjct: 604 ITLKDGYRSAAHFMSLHNMFEKMETTDNPTYEKIKTKLSKYTKWKKGVEAPDGNTHLKET 663

Query: 604 EDKIDPATGR 633
            D IDPATGR
Sbjct: 664 LDFIDPATGR 673


>01_06_1263 +
           35840502-35841308,35841763-35841969,35842272-35842370,
           35843361-35843464,35844521-35844698,35844774-35845244,
           35845383-35845523,35846290-35846349,35846427-35846490,
           35847295-35847524,35847606-35847704
          Length = 819

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 20/80 (25%), Positives = 35/80 (43%)
 Frame = +2

Query: 332 KSLGEGRLKSQHTHTDY*ISVTQNSTRNS*LSPIKYTFPTSISWPTRSPEQRICSEAKWT 511
           K+  +G L +++   +  + + +N T  +  S  K   P S S   RSP +R  S  +  
Sbjct: 375 KATADGILHTKNWDIEPLVPLPENITSTNLTSSAKDLSPFSFSTSRRSPSRRAKSRWEPV 434

Query: 512 TLTSALRRMPLISSTVGRTN 571
                  ++ LIS    +TN
Sbjct: 435 VEEKVANKVELISKESAKTN 454


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,399,516
Number of Sequences: 37544
Number of extensions: 464941
Number of successful extensions: 1248
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1201
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1248
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)