Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_P20
(846 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC16A11.10c |oca8||cytochrome b5 |Schizosaccharomyces pombe|ch... 92 1e-19
SPBC29A10.16c |||cytochrome b5 |Schizosaccharomyces pombe|chr 2|... 83 5e-17
SPAC1F12.10c |||NADPH-hemoprotein reductase |Schizosaccharomyces... 52 8e-08
SPCC330.03c |||NADPH-hemoprotein reductase|Schizosaccharomyces p... 47 4e-06
SPCC1281.06c |||acyl-coA desaturase |Schizosaccharomyces pombe|c... 42 1e-04
SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 27 2.5
SPAC27F1.07 |||dolichyl-diphospho-oligosaccharide-protein glycos... 26 5.8
SPBC27B12.06 |gpi13||pig-O |Schizosaccharomyces pombe|chr 2|||Ma... 26 7.7
SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar ... 26 7.7
>SPCC16A11.10c |oca8||cytochrome b5 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 129
Score = 91.9 bits (218), Expect = 1e-19
Identities = 37/75 (49%), Positives = 58/75 (77%)
Frame = +2
Query: 317 KNLTLDEVKKHKDEKSVWIIIHNDVYDVTKFLEEHPGGADSLLEVAGKDGTQAFEDVGHS 496
K +T++EV KH ++I++ + VYD++KFL+ HPGG + L+++AG+D + FEDVGHS
Sbjct: 4 KTITVEEVLKHNTRDDLYIVVKDKVYDISKFLDAHPGGEEVLVDLAGRDASGPFEDVGHS 63
Query: 497 DDARELLKKYKIGTL 541
+DA+ELL+K+ IG L
Sbjct: 64 EDAQELLEKFYIGNL 78
>SPBC29A10.16c |||cytochrome b5 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 124
Score = 83.0 bits (196), Expect = 5e-17
Identities = 36/79 (45%), Positives = 57/79 (72%), Gaps = 2/79 (2%)
Frame = +2
Query: 332 DEVKKHKDEKSVWIIIHNDVYDVTKFLEEHPGGADSLLEVAGKDGTQAFEDVGHSDDARE 511
+E+ +H + K ++++I+ VYDV+ F ++HPGG D +L+ AG+D T+A++D+GHS A E
Sbjct: 9 EEIVEHNNSKDMYMVINGKVYDVSNFADDHPGGLDIMLDYAGQDATKAYQDIGHSIAADE 68
Query: 512 LLKKYKIGTLPPG--ERCK 562
LL++ IG L PG ER K
Sbjct: 69 LLEEMYIGDLKPGTEERLK 87
>SPAC1F12.10c |||NADPH-hemoprotein reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 147
Score = 52.4 bits (120), Expect = 8e-08
Identities = 26/73 (35%), Positives = 39/73 (53%)
Frame = +2
Query: 323 LTLDEVKKHKDEKSVWIIIHNDVYDVTKFLEEHPGGADSLLEVAGKDGTQAFEDVGHSDD 502
+T +E+ KHK ++ WI I VY+V+ +L HP G +L+ AG+D T F +
Sbjct: 74 VTKEELAKHKTKEDCWIAIRGKVYNVSAYLPYHPAGQKRILDYAGRDATVIFMKFHAWVN 133
Query: 503 ARELLKKYKIGTL 541
LLK +G L
Sbjct: 134 EEALLKTSFVGFL 146
>SPCC330.03c |||NADPH-hemoprotein reductase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 145
Score = 46.8 bits (106), Expect = 4e-06
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Frame = +2
Query: 320 NLTLDEVKKHKDEKSVWIIIHNDVYDVTKFLEEHPGGADSLLEVAGKDGTQAFEDVGHSD 499
++T +E+ KH W+ I VY+VT +L HP G +L+ +G D T+ + + H D
Sbjct: 71 SVTAEELAKHCSPDDCWMAIRGKVYNVTAYLPYHPVGPKKILKHSGVDATKPY--LKHHD 128
Query: 500 --DARELLKKYKIGTL 541
+ ELLK +G L
Sbjct: 129 WVNEEELLKTSFVGYL 144
>SPCC1281.06c |||acyl-coA desaturase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 479
Score = 41.9 bits (94), Expect = 1e-04
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +2
Query: 371 IIIHNDVYDVTKFLEEHPGGADSLLEVAGKDGTQAFED--VGHSDDARELLKKYKIGTLP 544
++I+ V+D+T F EHPGG L GKD T AF H++ A LL Y++ +
Sbjct: 376 VLINGVVHDMTGF--EHPGGQGLLRSAFGKDATAAFNGGVYDHTNGAHNLLSTYRVAVVR 433
Query: 545 PG 550
G
Sbjct: 434 GG 435
>SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 557
Score = 27.5 bits (58), Expect = 2.5
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = -1
Query: 558 HLSPGGNVPILYFFNNSRASSLCPTSSKAWVPSFPATSNNESAPPGCSSKNLV 400
H +P G VP + N + + P+ S + FP+TS + SA PG S+ +V
Sbjct: 336 HSAPPGFVPYDFPITNDK---MYPSPS--FQEEFPSTSKSPSATPGSSNAPVV 383
>SPAC27F1.07 |||dolichyl-diphospho-oligosaccharide-protein
glycosyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 450
Score = 26.2 bits (55), Expect = 5.8
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +2
Query: 338 VKKHKDEKSVWIIIHNDVYDVTKFLEEHPGGADSLLEVAGKDG 466
+K+ + + + I ++N+VYD+ PG + +LL AG DG
Sbjct: 76 IKEEEKKGTNPIKVNNNVYDIPLQPPVKPGESRTLLIQAGLDG 118
>SPBC27B12.06 |gpi13||pig-O |Schizosaccharomyces pombe|chr
2|||Manual
Length = 918
Score = 25.8 bits (54), Expect = 7.7
Identities = 18/64 (28%), Positives = 27/64 (42%)
Frame = -2
Query: 581 FEQSVMICIFHLEATFQFCISSTTLEHHRYVPRLQKPGFHPSLPLLTMNQLHLDAPPKT* 402
FE++V++ I L F + + H+ + + HP LT Q DAP T
Sbjct: 81 FERAVIVIIDALRYDFLIPYNDSNYYHNAFTTPYETSVLHPENSYLT--QFIADAPTTTS 138
Query: 401 SRRK 390
R K
Sbjct: 139 QRLK 142
>SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar
membrane transporter Hmt1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 830
Score = 25.8 bits (54), Expect = 7.7
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -3
Query: 412 QKLSHVVNIIMNDYPHALFVFMFLDLVKC*IFTHFSLKI 296
++ H V+I + LF FL++V+ IFT FSL I
Sbjct: 468 ERYGHAVDIYLKQERKVLFSLNFLNIVQGGIFT-FSLAI 505
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,046,423
Number of Sequences: 5004
Number of extensions: 56377
Number of successful extensions: 143
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 143
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 418457710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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