Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_P20
         (846 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78539-6|CAB01732.2|  134|Caenorhabditis elegans Hypothetical pr...   105   4e-23
Z81052-7|CAJ58492.1|  103|Caenorhabditis elegans Hypothetical pr...    94   1e-19
AF003141-8|AAK21480.1|  141|Caenorhabditis elegans Hypothetical ...    91   1e-18
AL032654-5|CAD91715.2|  516|Caenorhabditis elegans Hypothetical ...    54   2e-07
AL032654-4|CAA21721.2|  552|Caenorhabditis elegans Hypothetical ...    54   2e-07
Z99942-5|CAI79198.1|  178|Caenorhabditis elegans Hypothetical pr...    52   4e-07
Z99942-4|CAB17069.1|  541|Caenorhabditis elegans Hypothetical pr...    52   4e-07
Z74038-3|CAA98498.2|   89|Caenorhabditis elegans Hypothetical pr...    44   1e-04
Z81038-3|CAB02759.1|  316|Caenorhabditis elegans Hypothetical pr...    36   0.027
Z92809-4|CAI06053.1|  615|Caenorhabditis elegans Hypothetical pr...    31   1.0  
AM748822-1|CAO72176.1|  591|Caenorhabditis elegans hexosaminidas...    31   1.0  
AL023839-4|CAA19506.2|  615|Caenorhabditis elegans Hypothetical ...    31   1.0  
Z81477-4|CAB03925.2|  279|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z74043-10|CAA98542.2|  653|Caenorhabditis elegans Hypothetical p...    29   4.2  
AF043699-7|AAK84627.1|  927|Caenorhabditis elegans Dipeptidyl pe...    28   7.3  
AF043699-6|AAB97564.1|  931|Caenorhabditis elegans Dipeptidyl pe...    28   7.3  

>Z78539-6|CAB01732.2|  134|Caenorhabditis elegans Hypothetical
           protein C31E10.7 protein.
          Length = 134

 Score =  105 bits (252), Expect = 4e-23
 Identities = 46/80 (57%), Positives = 58/80 (72%)
 Frame = +2

Query: 317 KNLTLDEVKKHKDEKSVWIIIHNDVYDVTKFLEEHPGGADSLLEVAGKDGTQAFEDVGHS 496
           K +TL E+ +H   KS W++I N V+DVTKFL+EHPGG + LLE AG DGT+AFEDVGHS
Sbjct: 5   KQITLKEIAEHNTNKSAWLVIGNKVFDVTKFLDEHPGGCEVLLEQAGSDGTEAFEDVGHS 64

Query: 497 DDARELLKKYKIGTLPPGER 556
            DAR +  +Y IG +   ER
Sbjct: 65  TDARHMKDEYLIGEVVASER 84


>Z81052-7|CAJ58492.1|  103|Caenorhabditis elegans Hypothetical
           protein D2023.1b protein.
          Length = 103

 Score = 94.3 bits (224), Expect = 1e-19
 Identities = 45/78 (57%), Positives = 53/78 (67%)
 Frame = +2

Query: 323 LTLDEVKKHKDEKSVWIIIHNDVYDVTKFLEEHPGGADSLLEVAGKDGTQAFEDVGHSDD 502
           +T  EV  H  E   WII+ N VYDVTKF++ HPGG + LLE AG D T AFE VGHS  
Sbjct: 6   ITRSEVNMHCSEDDCWIIVGNYVYDVTKFVDLHPGGPEILLEFAGGDATDAFESVGHSMC 65

Query: 503 ARELLKKYKIGTLPPGER 556
           AR +L K+KIG+LP  ER
Sbjct: 66  ARMMLTKFKIGSLPEDER 83


>AF003141-8|AAK21480.1|  141|Caenorhabditis elegans Hypothetical
           protein W02D3.1 protein.
          Length = 141

 Score = 90.6 bits (215), Expect = 1e-18
 Identities = 43/80 (53%), Positives = 54/80 (67%), Gaps = 3/80 (3%)
 Frame = +2

Query: 323 LTLDEVKKHKDE---KSVWIIIHNDVYDVTKFLEEHPGGADSLLEVAGKDGTQAFEDVGH 493
           ++LDEV KH  E   +S WI+I   VYDVTKFL EHPGG + + ++AGKD T  F DVGH
Sbjct: 7   ISLDEVSKHNWEDADQSCWIVISGKVYDVTKFLNEHPGGEEVITQLAGKDATVGFLDVGH 66

Query: 494 SDDARELLKKYKIGTLPPGE 553
           S DA E+  +Y IG LP  +
Sbjct: 67  SKDAIEMANEYLIGQLPESD 86


>AL032654-5|CAD91715.2|  516|Caenorhabditis elegans Hypothetical
           protein Y52B11A.3b protein.
          Length = 516

 Score = 53.6 bits (123), Expect = 2e-07
 Identities = 26/77 (33%), Positives = 40/77 (51%)
 Frame = +2

Query: 305 RKMSKNLTLDEVKKHKDEKSVWIIIHNDVYDVTKFLEEHPGGADSLLEVAGKDGTQAFED 484
           +++S  +   E+ KH  +   W+ +   VYDVTK+L+ HPGG   LL  AG+D T  F  
Sbjct: 15  KRVSGGVDHVELMKHNTKDDCWVHLFGIVYDVTKYLDFHPGGIPELLRGAGRDATPLFNQ 74

Query: 485 VGHSDDARELLKKYKIG 535
                +   +LK   +G
Sbjct: 75  YHAWVNYESMLKACVVG 91


>AL032654-4|CAA21721.2|  552|Caenorhabditis elegans Hypothetical
           protein Y52B11A.3a protein.
          Length = 552

 Score = 53.6 bits (123), Expect = 2e-07
 Identities = 26/77 (33%), Positives = 40/77 (51%)
 Frame = +2

Query: 305 RKMSKNLTLDEVKKHKDEKSVWIIIHNDVYDVTKFLEEHPGGADSLLEVAGKDGTQAFED 484
           +++S  +   E+ KH  +   W+ +   VYDVTK+L+ HPGG   LL  AG+D T  F  
Sbjct: 51  KRVSGGVDHVELMKHNTKDDCWVHLFGIVYDVTKYLDFHPGGIPELLRGAGRDATPLFNQ 110

Query: 485 VGHSDDARELLKKYKIG 535
                +   +LK   +G
Sbjct: 111 YHAWVNYESMLKACVVG 127


>Z99942-5|CAI79198.1|  178|Caenorhabditis elegans Hypothetical
           protein H13N06.4b protein.
          Length = 178

 Score = 52.4 bits (120), Expect = 4e-07
 Identities = 30/73 (41%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
 Frame = +2

Query: 332 DEVKKH-KDEKSVWIIIHNDVYDVTKFLEEHPGGADSLLEVAGK--DGTQAFEDVGHSDD 502
           +EVKKH KD   +W+   + VYDVT F+  HPGG D +L  AG   D   A      + +
Sbjct: 85  EEVKKHGKDADRIWVTYKDGVYDVTDFIAMHPGG-DKILLAAGAAVDPFWALYSQHKTKE 143

Query: 503 ARELLKKYKIGTL 541
             E+L+ Y+IG L
Sbjct: 144 VLEILEGYRIGKL 156


>Z99942-4|CAB17069.1|  541|Caenorhabditis elegans Hypothetical
           protein H13N06.4a protein.
          Length = 541

 Score = 52.4 bits (120), Expect = 4e-07
 Identities = 30/73 (41%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
 Frame = +2

Query: 332 DEVKKH-KDEKSVWIIIHNDVYDVTKFLEEHPGGADSLLEVAGK--DGTQAFEDVGHSDD 502
           +EVKKH KD   +W+   + VYDVT F+  HPGG D +L  AG   D   A      + +
Sbjct: 85  EEVKKHGKDADRIWVTYKDGVYDVTDFIAMHPGG-DKILLAAGAAVDPFWALYSQHKTKE 143

Query: 503 ARELLKKYKIGTL 541
             E+L+ Y+IG L
Sbjct: 144 VLEILEGYRIGKL 156


>Z74038-3|CAA98498.2|   89|Caenorhabditis elegans Hypothetical
           protein F58B4.2 protein.
          Length = 89

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 18/51 (35%), Positives = 31/51 (60%)
 Frame = +2

Query: 317 KNLTLDEVKKHKDEKSVWIIIHNDVYDVTKFLEEHPGGADSLLEVAGKDGT 469
           K  T  +V++H     +W++  + VY++T +  +HPGG  ++L  AGKD T
Sbjct: 10  KEYTRSQVEQHCTHDDLWLLFRDKVYNMTPYFNQHPGGL-AILRYAGKDVT 59


>Z81038-3|CAB02759.1|  316|Caenorhabditis elegans Hypothetical
           protein C25A1.5 protein.
          Length = 316

 Score = 36.3 bits (80), Expect = 0.027
 Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 8/75 (10%)
 Frame = +2

Query: 353 DEKSVWIIIHNDVYDVTKFLEEHPGGADSLLEVAGKD------GTQAFEDV--GHSDDAR 508
           ++K + + +    YD+  F  +HPGGA  L  +AG++      G +    V   HS+ A 
Sbjct: 7   EKKPLLVQLDGQYYDIADFAPKHPGGAKVLNRLAGEEIGEFIRGEKRIMGVRHEHSEAAY 66

Query: 509 ELLKKYKIGTLPPGE 553
            +L++Y +  +  G+
Sbjct: 67  NMLERYNVNAIQKGD 81


>Z92809-4|CAI06053.1|  615|Caenorhabditis elegans Hypothetical
           protein Y39A1C.4 protein.
          Length = 615

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
 Frame = -2

Query: 566 MICIFHLEATFQFCISSTTLEHHRYVPRLQKPGFHPSLPLLTMNQLHLDA--PPKT*SRR 393
           ++ I  L AT QF    +T  H R+VP    P  HP+ PL         A    K  SR+
Sbjct: 22  IVTIIFLFATSQF---KSTTTHARFVPEPSDPRLHPNSPLQAPKAQEPAAAETTKKPSRQ 78

Query: 392 KHH 384
            HH
Sbjct: 79  PHH 81


>AM748822-1|CAO72176.1|  591|Caenorhabditis elegans hexosaminidase
           protein.
          Length = 591

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
 Frame = -2

Query: 566 MICIFHLEATFQFCISSTTLEHHRYVPRLQKPGFHPSLPLLTMNQLHLDA--PPKT*SRR 393
           ++ I  L AT QF    +T  H R+VP    P  HP+ PL         A    K  SR+
Sbjct: 22  IVTIIFLFATSQF---KSTTTHARFVPEPSDPRLHPNSPLQAPKAQEPAAAETTKKPSRQ 78

Query: 392 KHH 384
            HH
Sbjct: 79  PHH 81


>AL023839-4|CAA19506.2|  615|Caenorhabditis elegans Hypothetical
           protein Y39A1C.4 protein.
          Length = 615

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
 Frame = -2

Query: 566 MICIFHLEATFQFCISSTTLEHHRYVPRLQKPGFHPSLPLLTMNQLHLDA--PPKT*SRR 393
           ++ I  L AT QF    +T  H R+VP    P  HP+ PL         A    K  SR+
Sbjct: 22  IVTIIFLFATSQF---KSTTTHARFVPEPSDPRLHPNSPLQAPKAQEPAAAETTKKPSRQ 78

Query: 392 KHH 384
            HH
Sbjct: 79  PHH 81


>Z81477-4|CAB03925.2|  279|Caenorhabditis elegans Hypothetical
           protein C27C7.5 protein.
          Length = 279

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 15/43 (34%), Positives = 19/43 (44%)
 Frame = -1

Query: 588 FQFRTICDDLHLSPGGNVPILYFFNNSRASSLCPTSSKAWVPS 460
           F F  +     L P  N+ +    NNS A + CPTS     PS
Sbjct: 66  FDFGDVSTVEKLDPEENLKVAMKINNSTADTTCPTSISGSFPS 108


>Z74043-10|CAA98542.2|  653|Caenorhabditis elegans Hypothetical
           protein T19B10.3 protein.
          Length = 653

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +2

Query: 425 GGADSLLEVAGKDGTQAFEDVGHSDDARELLKKYKI 532
           G A+SLL+    +G     D G +DDA+E+   +K+
Sbjct: 233 GSAESLLKCGTVEGVFPTVDFGPTDDAKEIENNFKL 268


>AF043699-7|AAK84627.1|  927|Caenorhabditis elegans Dipeptidyl
           peptidase four (iv)family protein 3, isoform b protein.
          Length = 927

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +2

Query: 338 VKKHKDEKSVWIIIHNDVYDVTKFLEEHP 424
           V+ HK     WI  HN +Y +    EEHP
Sbjct: 470 VQIHKARNDYWINTHNAIYPLKITDEEHP 498


>AF043699-6|AAB97564.1|  931|Caenorhabditis elegans Dipeptidyl
           peptidase four (iv)family protein 3, isoform a protein.
          Length = 931

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +2

Query: 338 VKKHKDEKSVWIIIHNDVYDVTKFLEEHP 424
           V+ HK     WI  HN +Y +    EEHP
Sbjct: 474 VQIHKARNDYWINTHNAIYPLKITDEEHP 502


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,973,787
Number of Sequences: 27780
Number of extensions: 314372
Number of successful extensions: 801
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 760
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 801
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)