Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_P20
         (846 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    24   1.5  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   2.7  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   2.7  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    22   8.2  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -3

Query: 259 REAYHGMSIWKFIMINGYKTSYNDE 185
           R+A++G+ +WK +    YK     E
Sbjct: 251 RDAFYGLPLWKLLPTCAYKQLIESE 275


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -1

Query: 612  PASATTXPFQFRTICDDLHLSPGGNVPILYF 520
            P +AT       T+   LH+ P    PILYF
Sbjct: 1502 PPAATFLSPNSTTLVLRLHVWPDNGCPILYF 1532


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -1

Query: 612  PASATTXPFQFRTICDDLHLSPGGNVPILYF 520
            P +AT       T+   LH+ P    PILYF
Sbjct: 1498 PPAATFLSPNSTTLVLRLHVWPDNGCPILYF 1528


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = -3

Query: 361 LFVFMFLDLVKC*IFTHFSLKIFKFLKEVLVGI*REAYHGMS 236
           +  F+   L+   ++T   LKI    K+ L  + + A HG S
Sbjct: 218 IIFFLIPMLIILVVYTRMGLKIRNSTKDTLNSVVQGAIHGDS 259


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,166
Number of Sequences: 438
Number of extensions: 4246
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27188448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)