Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_P18
(869 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67; Eukaryo... 305 7e-82
UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107; Fungi/... 289 5e-77
UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57; Eukaryo... 246 6e-64
UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4... 203 5e-51
UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-gr... 201 2e-50
UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative; ... 184 3e-45
UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|R... 183 6e-45
UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, wh... 181 2e-44
UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;... 161 2e-38
UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas ... 159 1e-37
UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1; Encephal... 144 3e-33
UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1; ... 106 8e-22
UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951, ... 103 6e-21
UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31; Archa... 69 1e-18
UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillard... 92 1e-17
UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1; Methan... 86 1e-15
UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8; Euryar... 59 1e-13
UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;... 74 4e-12
UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2; Methan... 54 1e-10
UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2; environm... 45 2e-10
UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12; Archa... 59 1e-07
UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus... 56 1e-06
UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole gen... 56 1e-06
UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3; Thermo... 42 3e-06
UniRef50_Q3LVV6 Cluster: Ribosomal protein L5; n=1; Bigelowiella... 48 4e-04
UniRef50_A0RUE8 Cluster: Ribosomal protein L18; n=1; Cenarchaeum... 36 0.072
UniRef50_Q6L1A8 Cluster: 50S ribosomal protein L18P; n=2; Thermo... 37 0.77
UniRef50_Q9K4U6 Cluster: 15,16-dihydrobiliverdin:ferredoxin oxid... 35 3.1
>UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67;
Eukaryota|Rep: 60S ribosomal protein L5 - Drosophila
melanogaster (Fruit fly)
Length = 299
Score = 305 bits (750), Expect = 7e-82
Identities = 144/201 (71%), Positives = 157/201 (78%)
Frame = +2
Query: 62 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 241
MGFVKVVKNKQYFKRYQVKF+RRREGKTDYYARKRL QDKNKYNTPKYRLIVRLSNKD+
Sbjct: 1 MGFVKVVKNKQYFKRYQVKFRRRREGKTDYYARKRLTFQDKNKYNTPKYRLIVRLSNKDI 60
Query: 242 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 421
T Q+AY+RIEGD +VCAAYSHELP+YG++VGLTNYAAAY TG
Sbjct: 61 TVQIAYARIEGDRVVCAAYSHELPKYGIQVGLTNYAAAYCTGLLVARRVLNKLGLDSLYA 120
Query: 422 XXXXXXXXEYNVEPVDXGPGAXRCXLDVGLARTTTGAXVFGAMKGAVDXGLNVPHSIKRF 601
E+NVEPVD GPGA RC LDVGLARTTTGA VFGAMKGAVD GLN+PHS+KRF
Sbjct: 121 GCTEVTGEEFNVEPVDDGPGAFRCFLDVGLARTTTGARVFGAMKGAVDGGLNIPHSVKRF 180
Query: 602 PGXDAESXKFXAEVXRAPIXG 664
PG AE+ F A+V RA I G
Sbjct: 181 PGYSAETKSFNADVHRAHIFG 201
>UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107;
Fungi/Metazoa group|Rep: 60S ribosomal protein L5 - Homo
sapiens (Human)
Length = 297
Score = 289 bits (710), Expect = 5e-77
Identities = 136/201 (67%), Positives = 153/201 (76%)
Frame = +2
Query: 62 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 241
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 242 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 421
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 422 XXXXXXXXEYNVEPVDXGPGAXRCXLDVGLARTTTGAXVFGAMKGAVDXGLNVPHSIKRF 601
EYNVE +D PGA C LD GLARTTTG VFGA+KGAVD GL++PHS KRF
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Query: 602 PGXDAESXKFXAEVXRAPIXG 664
PG D+ES +F AEV R I G
Sbjct: 181 PGYDSESKEFNAEVHRKHIMG 201
>UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57;
Eukaryota|Rep: 60S ribosomal protein L5 - Caenorhabditis
elegans
Length = 293
Score = 246 bits (602), Expect = 6e-64
Identities = 120/201 (59%), Positives = 139/201 (69%)
Frame = +2
Query: 62 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 241
MG VKV+KNK YFKRYQVK +RRREGKTDYYARKRL VQDKNKYNTPKYRLIVR++NKDV
Sbjct: 1 MGLVKVIKNKAYFKRYQVKLRRRREGKTDYYARKRLTVQDKNKYNTPKYRLIVRITNKDV 60
Query: 242 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 421
Q+AYS+IEGD +V +AYSHELPRYG+KVGLTNYAAAY+TG
Sbjct: 61 VAQLAYSKIEGDVVVASAYSHELPRYGLKVGLTNYAAAYATGLLLARRHLKTIGLDSTYK 120
Query: 422 XXXXXXXXEYNVEPVDXGPGAXRCXLDVGLARTTTGAXVFGAMKGAVDXGLNVPHSIKRF 601
+YNVE + + LD+GLARTTTG+ +F MKG D G+NVPHS RF
Sbjct: 121 GHEELTGEDYNVEE-EGDRAPFKAVLDIGLARTTTGSKIFAVMKGVADGGINVPHSESRF 179
Query: 602 PGXDAESXKFXAEVXRAPIXG 664
G D ES ++ AE R I G
Sbjct: 180 FGFDQESKEYNAEAHRDRILG 200
>UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4;
Leishmania|Rep: 60S ribosomal protein L5, putative -
Leishmania major strain Friedlin
Length = 328
Score = 203 bits (495), Expect = 5e-51
Identities = 103/207 (49%), Positives = 131/207 (63%), Gaps = 6/207 (2%)
Frame = +2
Query: 62 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 241
M FVKVVKNK YFKR+QVK++RRREGKTDY+AR+++V+QDK K+ +PKYRL+VR++NKD+
Sbjct: 24 MPFVKVVKNKAYFKRFQVKYRRRREGKTDYHARRQMVLQDKTKFGSPKYRLVVRITNKDI 83
Query: 242 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG--XXXXXXXXXXXXXXXX 415
Q+ ++I GD +V AAY+HELP +G++ GLTNYAAAY+TG
Sbjct: 84 IAQIVQAKIVGDEVVMAAYAHELPAFGIEHGLTNYAAAYATGLLLARRTLAKLGIADKFQ 143
Query: 416 XXXXXXXXXXEYNVEPVDXGPGAXR----CXLDVGLARTTTGAXVFGAMKGAVDXGLNVP 583
+ D G R LDVGLARTTTGA VFG +KGAVD G+ VP
Sbjct: 144 GAKEADGSYSAVRTKKDDEGDDEERFPFKAILDVGLARTTTGARVFGVLKGAVDGGMAVP 203
Query: 584 HSIKRFPGXDAESXKFXAEVXRAPIXG 664
H RFPG + E A+V R I G
Sbjct: 204 HRPNRFPGYNKEKSSLDAKVHRDRIFG 230
>UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-green
alga; n=1; Ostreococcus tauri|Rep: T08009 probable
ribosomal protein L5-green alga - Ostreococcus tauri
Length = 331
Score = 201 bits (491), Expect = 2e-50
Identities = 98/198 (49%), Positives = 120/198 (60%), Gaps = 2/198 (1%)
Frame = +2
Query: 77 VVKNKQYFKRYQVKFKRRREG--KTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQ 250
V K Y RYQVKF RRR G KTDY AR+RL+ QDKNKYN+PKYR +VR +N+DV CQ
Sbjct: 13 VAKTTAYQSRYQVKFARRRLGACKTDYQARQRLITQDKNKYNSPKYRFVVRFTNRDVVCQ 72
Query: 251 VAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXX 430
V Y+ + GD +CAAYSHELP+YG+K GLTNYAA Y+TG
Sbjct: 73 VVYATLSGDVTICAAYSHELPKYGMKAGLTNYAATYATGLLCARRLLTKYGLADAYEGKT 132
Query: 431 XXXXXEYNVEPVDXGPGAXRCXLDVGLARTTTGAXVFGAMKGAVDXGLNVPHSIKRFPGX 610
+Y+VE D +C LD GL RT+TGA VF A+KGAVD GL++PH+ KRF G
Sbjct: 133 EDLGEDYHVEQGDEEARPFKCFLDTGLVRTSTGARVFAALKGAVDGGLDIPHNEKRFAGY 192
Query: 611 DAESXKFXAEVXRAPIXG 664
D + + I G
Sbjct: 193 DLQDKSHDPDTLERYIKG 210
>UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative;
n=4; Plasmodium (Vinckeia)|Rep: Ribosomal protein family
L5, putative - Plasmodium berghei
Length = 314
Score = 184 bits (448), Expect = 3e-45
Identities = 101/204 (49%), Positives = 118/204 (57%), Gaps = 3/204 (1%)
Frame = +2
Query: 62 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 241
M +VKVVKNK YFKRYQVK++RRREGKTDY ARK L++QDKNKYN K R IVR +N +
Sbjct: 1 MAYVKVVKNKAYFKRYQVKYRRRREGKTDYRARKALILQDKNKYNAQKLRFIVRKTNNQI 60
Query: 242 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG---XXXXXXXXXXXXXXX 412
CQ+A S IEGD I+ A S EL RYG+ VGL NYAAAY+TG
Sbjct: 61 ICQIASSHIEGDKILSEAKSKELIRYGIPVGLKNYAAAYATGLLCARRFLKSLNLDNQFI 120
Query: 413 XXXXXXXXXXXEYNVEPVDXGPGAXRCXLDVGLARTTTGAXVFGAMKGAVDXGLNVPHSI 592
E + + + LDVG+ RTTTG VF A+KGA D GLN+PH
Sbjct: 121 GVEKVTSESVAEDGDKEEEGDRKPIKAFLDVGITRTTTGNRVFAALKGACDGGLNIPHGN 180
Query: 593 KRFPGXDAESXKFXAEVXRAPIXG 664
RFPG E F E R I G
Sbjct: 181 NRFPGSKNE---FNPEQLRKNILG 201
>UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|Rep:
Ribosomal protein L5e - Hister sp. APV-2005
Length = 268
Score = 183 bits (445), Expect = 6e-45
Identities = 81/89 (91%), Positives = 87/89 (97%)
Frame = +2
Query: 62 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 241
MGFVKVVKNKQYFKR+QVKFKRRREGKTDYYARKRL+VQDKNKYNTPKYRLIVR SN+D+
Sbjct: 1 MGFVKVVKNKQYFKRFQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNRDI 60
Query: 242 TCQVAYSRIEGDHIVCAAYSHELPRYGVK 328
TCQ+AYSRIEGD I+CAAYSHELPRYGVK
Sbjct: 61 TCQIAYSRIEGDKILCAAYSHELPRYGVK 89
>UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_13,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 338
Score = 181 bits (441), Expect = 2e-44
Identities = 94/204 (46%), Positives = 125/204 (61%), Gaps = 3/204 (1%)
Frame = +2
Query: 62 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 241
M FVK+VK YFKR+Q KF+RRREGKTDYYAR RL+VQDK+KYN+PKYR +VR +N +
Sbjct: 1 MAFVKLVKGTPYFKRFQTKFRRRREGKTDYYARSRLIVQDKDKYNSPKYRFVVRHTNTKI 60
Query: 242 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 421
CQV Y+ ++GD +V AA S EL R+G+ GLTNYAAAY+TG
Sbjct: 61 ICQVIYATLKGDKVVAAAESTELKRFGLTSGLTNYAAAYATG---LLLARRTLKTLKMDK 117
Query: 422 XXXXXXXXEYNVEPVDXGPGAXRCXLDVGLARTTTGAXVFGAMKGAVDXGLNVPHSIKRF 601
+ N++ P LD+GL R+T G VF A+KGA D G+++PH+ +RF
Sbjct: 118 FYEGNKTIDGNLKTQRERP--FFAVLDIGLVRSTLGNRVFAALKGAADGGIHIPHNNRRF 175
Query: 602 PGXDAES---XKFXAEVXRAPIXG 664
PG ++ K+ A V + I G
Sbjct: 176 PGFSVDNDKKEKYDANVHKDRIFG 199
>UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal L18p/L5e
family protein - Tetrahymena thermophila SB210
Length = 590
Score = 161 bits (392), Expect = 2e-38
Identities = 80/189 (42%), Positives = 109/189 (57%), Gaps = 5/189 (2%)
Frame = +2
Query: 113 VKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCA 292
++ K+ +G TDYYARKRL++QDK+KYNTPKYRL+ R +N + Q+ Y+ ++ D ++CA
Sbjct: 307 IQIKQNYQGLTDYYARKRLIIQDKDKYNTPKYRLVARATNTRIIAQIVYATLKCDRVLCA 366
Query: 293 AYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDX 472
A S+EL R+GV GL +YAAAY+TG +NV+
Sbjct: 367 ADSYELKRFGVSTGLASYAAAYATGLLLARRLLKQIGLDTVYAGQTKVDGAYFNVDEDQK 426
Query: 473 GPGAXRCXLDVGLARTTTGAXVFGAMKGAVDXGLNVPHSIKRFPG-----XDAESXKFXA 637
+ LD GL RTTTG VFG +KGA D G+N+PHS RFPG + ES K+
Sbjct: 427 EKKPFKAILDAGLVRTTTGNRVFGVLKGACDGGINIPHSESRFPGYVRASDEGESSKYKP 486
Query: 638 EVXRAPIXG 664
E +A I G
Sbjct: 487 EDHKARIFG 495
Score = 45.2 bits (102), Expect = 0.002
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +2
Query: 62 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYY 154
+GFVKV+K K YFKR+Q K++RRR GK YY
Sbjct: 13 LGFVKVLKTKAYFKRFQTKYRRRR-GKQLYY 42
>UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas
vaginalis|Rep: Ribosomal protein L5 - Trichomonas
vaginalis
Length = 308
Score = 159 bits (385), Expect = 1e-37
Identities = 82/175 (46%), Positives = 104/175 (59%)
Frame = +2
Query: 74 KVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQV 253
K+VKN YF R+Q KF+RRRE KTDY R +L+ QDK KY KYRL+ R++N V Q+
Sbjct: 4 KLVKNAGYFSRFQTKFRRRREAKTDYVQRTQLIQQDKTKYGAAKYRLVARITNTKVIAQI 63
Query: 254 AYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXX 433
+ + GD VC A S ELP+YG+K+GL+NY AAY+TG
Sbjct: 64 VVAELTGDKTVCQALSTELPKYGIKLGLSNYPAAYATG---LLVARRFLTQMKLADVFKT 120
Query: 434 XXXXEYNVEPVDXGPGAXRCXLDVGLARTTTGAXVFGAMKGAVDXGLNVPHSIKR 598
EY + + P + LDVGLARTTTGA VF MKGAVD GL +PH++ R
Sbjct: 121 EITEEYLNDEENRRP--FKVILDVGLARTTTGAKVFAVMKGAVDGGLFIPHNVCR 173
>UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L5 -
Encephalitozoon cuniculi
Length = 283
Score = 144 bits (349), Expect = 3e-33
Identities = 79/194 (40%), Positives = 108/194 (55%), Gaps = 1/194 (0%)
Frame = +2
Query: 89 KQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRI 268
+ Y K +QVK +RRREGKTDY R ++ QD N + K+RL+VR++ V CQ+ + +
Sbjct: 4 RNYHKNFQVKRRRRREGKTDYKHRTNMIRQDSNSCGSVKHRLVVRITGSRVICQIVAAYM 63
Query: 269 EGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXE 448
+GD ++ A S EL RYG+ G TNY+AAY+TG
Sbjct: 64 DGDRVMVYADSRELERYGINFGATNYSAAYATG--FLIGRRALTAMSLDEVYRPKEIDGT 121
Query: 449 YNV-EPVDXGPGAXRCXLDVGLARTTTGAXVFGAMKGAVDXGLNVPHSIKRFPGXDAESX 625
Y+V + +D A R LD+GLAR+T GA VFGA+KGA D GLNVPHS +F G +
Sbjct: 122 YSVTKDIDGEKKAPRVFLDIGLARSTRGARVFGALKGASDAGLNVPHSAAKFYGHKPDG- 180
Query: 626 KFXAEVXRAPIXGF 667
F A+ I G+
Sbjct: 181 SFDAKELHDRIFGY 194
>UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1;
Theileria sp. CAAS-2005|Rep: Putative uncharacterized
protein - Theileria sp. CAAS-2005
Length = 255
Score = 106 bits (254), Expect = 8e-22
Identities = 62/150 (41%), Positives = 77/150 (51%), Gaps = 3/150 (2%)
Frame = +2
Query: 224 LSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXX 403
++NK V CQV S + GD + +A S EL YGVKVGLTNYAAAY TG
Sbjct: 4 VTNKRVICQVVSSTLVGDKVHASADSAELVHYGVKVGLTNYAAAYCTGLLLARRLLTKLK 63
Query: 404 XXXXXXXXXXXXXXEYNVEPVDXGPGAXRCXLDVGLARTTTGAXVFGAMKGAVDXGLNVP 583
Y+VE + + LDVG+ TTG VFGA+KGA D GL+VP
Sbjct: 64 LDSQFVGKLEVDGEVYHVEEEENERRPFKALLDVGVKNVTTGNRVFGALKGACDGGLHVP 123
Query: 584 HSIKRFPGXDAE---SXKFXAEVXRAPIXG 664
HS KRFPG + + + A+ R I G
Sbjct: 124 HSEKRFPGYSVDEENNGTYDAQAHRDRIFG 153
>UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_2951, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 117
Score = 103 bits (247), Expect = 6e-21
Identities = 46/72 (63%), Positives = 55/72 (76%)
Frame = +2
Query: 62 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 241
+ FVK K + Y KR+QVKFKRRR GKTDY AR RL+ QDKNKYNTPKYR +VR +NKD+
Sbjct: 12 LAFVKAQKTRAYSKRFQVKFKRRRAGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 71
Query: 242 TCQVAYSRIEGD 277
T Q+ + I GD
Sbjct: 72 TAQIISASIAGD 83
>UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31;
Archaea|Rep: 50S ribosomal protein L18P - Aeropyrum
pernix
Length = 214
Score = 69.3 bits (162), Expect(2) = 1e-18
Identities = 41/89 (46%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Frame = +2
Query: 104 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 283
RY+V +RRREGKT+YY R RLV + K R+ VR+SN+ + Q +RIEGD +
Sbjct: 6 RYRVPLRRRREGKTNYYRRFRLV-------KSGKPRMAVRISNEYLWVQFLEARIEGDRV 58
Query: 284 VCAAYSHEL-PRYGVKVGLTNYAAAYSTG 367
+ AA+S EL ++G K N AAY TG
Sbjct: 59 IAAAHSRELIKKFGWKGDGNNTCAAYLTG 87
Score = 47.2 bits (107), Expect(2) = 1e-18
Identities = 20/45 (44%), Positives = 28/45 (62%)
Frame = +2
Query: 479 GAXRCXLDVGLARTTTGAXVFGAMKGAVDXGLNVPHSIKRFPGXD 613
G LDVGL + G+ VF A+KGA+D G+ +PHS + PG +
Sbjct: 98 GVREAVLDVGLHKPVKGSRVFAALKGALDAGVEIPHSEEILPGDE 142
>UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillardia
theta|Rep: 60S ribosomal protein L5 - Guillardia theta
(Cryptomonas phi)
Length = 232
Score = 92.3 bits (219), Expect = 1e-17
Identities = 53/171 (30%), Positives = 83/171 (48%)
Frame = +2
Query: 86 NKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSR 265
N Y R+++K +RRR GKTDY R +L+ QDK K+ K R+I+R S ++++ Q+ S
Sbjct: 9 NASYHSRFKLKKRRRRIGKTDYKKRMKLIRQDKKKFENKKKRIIIRFSKRNLSLQMVNSN 68
Query: 266 IEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXX 445
++GD I+ ++Y L + K NY +Y G
Sbjct: 69 VDGDFILLSSYLKNLSKLEYKNLTNNYPFSYLLG-----------YYFGKDLIEKVKQSE 117
Query: 446 EYNVEPVDXGPGAXRCXLDVGLARTTTGAXVFGAMKGAVDXGLNVPHSIKR 598
YN + +D+GL R T G F +MKG+VD G+N+PH+ +
Sbjct: 118 TYNKKNYS---SKITAIIDIGLKRATIGNKSFASMKGSVDSGINIPHNYNK 165
>UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1;
Methanoculleus marisnigri JR1|Rep: Ribosomal protein
L18P/L5E - Methanoculleus marisnigri (strain ATCC 35101
/ DSM 1498 / JR1)
Length = 175
Score = 86.2 bits (204), Expect = 1e-15
Identities = 64/179 (35%), Positives = 85/179 (47%)
Frame = +2
Query: 104 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 283
RY V F+RR EGKTDYY R L+ TP R++VR +N+ + Q+ +EGD
Sbjct: 6 RYFVPFRRRHEGKTDYYKRMSLLSS-----GTP--RMVVRKTNRQIIVQLVVPEVEGDST 58
Query: 284 VCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 463
+ AAYS EL YG + + AAY TG + V+
Sbjct: 59 LVAAYSAELAGYGYEGSTASTPAAYLTGML-------------------------FAVKA 93
Query: 464 VDXGPGAXRCXLDVGLARTTTGAXVFGAMKGAVDXGLNVPHSIKRFPGXDAESXKFXAE 640
++ G G LD+GLAR GA VF A+KGAVD GL+VP+ P + AE
Sbjct: 94 LNAGYG--EAILDIGLARAKPGARVFAALKGAVDAGLDVPYGESILPDEERLKGAHIAE 150
>UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8;
Euryarchaeota|Rep: 50S ribosomal protein L18P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 187
Score = 58.8 bits (136), Expect(2) = 1e-13
Identities = 34/88 (38%), Positives = 48/88 (54%)
Frame = +2
Query: 104 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 283
RY+V +RRRE +TDY+ R RL+ + K RL+ R SNK V Q+ GD
Sbjct: 6 RYKVPMRRRREARTDYHQRLRLL-------KSGKPRLVARKSNKHVRAQLVTLGPNGDDT 58
Query: 284 VCAAYSHELPRYGVKVGLTNYAAAYSTG 367
+ +A+S +L YG + N +AY TG
Sbjct: 59 LASAHSSDLAEYGWEAPTGNMPSAYLTG 86
Score = 40.7 bits (91), Expect(2) = 1e-13
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +2
Query: 479 GAXRCXLDVGLARTTTGAXVFGAMKGAVDXGLNVPHS 589
G LD+GL T G+ VF +GA+D GL++PH+
Sbjct: 97 GVEEAVLDIGLNSPTPGSKVFAIQEGAIDAGLDIPHN 133
>UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 161
Score = 74.1 bits (174), Expect = 4e-12
Identities = 33/52 (63%), Positives = 41/52 (78%)
Frame = +2
Query: 212 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 367
+IV +N+ + CQ+AY+ E D IVCAAY+HELP+ GVKVGLTNYAAAY G
Sbjct: 1 MIVLATNRGIICQIAYAGNECDMIVCAAYAHELPKSGVKVGLTNYAAAYCIG 52
Score = 65.3 bits (152), Expect = 2e-09
Identities = 32/53 (60%), Positives = 37/53 (69%)
Frame = +2
Query: 506 GLARTTTGAXVFGAMKGAVDXGLNVPHSIKRFPGXDAESXKFXAEVXRAPIXG 664
GLARTTTG VFGA+K VD GL++PHS K FPG D+ S +F AEV I G
Sbjct: 71 GLARTTTGNKVFGALKEPVDCGLSIPHSTKCFPGYDSVSKEFNAEVYCKDIMG 123
>UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2;
Methanobacteriaceae|Rep: 50S ribosomal protein L18P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 193
Score = 53.6 bits (123), Expect(2) = 1e-10
Identities = 33/87 (37%), Positives = 47/87 (54%)
Frame = +2
Query: 107 YQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIV 286
Y+V+FKRRREGKT+Y R +LV DK R++VR+++ Q+ GD +
Sbjct: 7 YKVQFKRRREGKTNYNKRYKLVDLDKT-------RMVVRITSNHTITQLVKIGENGDETL 59
Query: 287 CAAYSHELPRYGVKVGLTNYAAAYSTG 367
+A S L +G N +AAY TG
Sbjct: 60 VSATSKNLKEFGWLGNGKNTSAAYLTG 86
Score = 35.9 bits (79), Expect(2) = 1e-10
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 479 GAXRCXLDVGLARTTTGAXVFGAMKGAVDXGLNVPHSIKRFP 604
G LD+G+ + G ++ +KGA+D GL +PH+ P
Sbjct: 97 GYDETILDIGVQPSIKGTKIYAVLKGALDAGLYIPHNDSILP 138
>UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2;
environmental samples|Rep: Ribosomal protein L18/L5 -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 171
Score = 45.2 bits (102), Expect(2) = 2e-10
Identities = 20/45 (44%), Positives = 26/45 (57%)
Frame = +2
Query: 479 GAXRCXLDVGLARTTTGAXVFGAMKGAVDXGLNVPHSIKRFPGXD 613
G LDVGLA T+G VF A++G VD GL++PH P +
Sbjct: 100 GHSEAVLDVGLAAATSGNRVFAALRGMVDAGLDIPHGADVLPSDE 144
Score = 43.2 bits (97), Expect(2) = 2e-10
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Frame = +2
Query: 101 KRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDH 280
K +++FKRRR G+TDY R R++ R +VR+SN TCQ+ GD
Sbjct: 5 KNQRLRFKRRRTGETDYRRRMRML-------RGGATRAVVRVSNTQTTCQLINYDSTGDE 57
Query: 281 IVCAAYSHEL-PRYG--VKVGLTNYAAAYSTG 367
++ + L R+G + + A+Y TG
Sbjct: 58 VIISVTGKTLVDRFGWPLDASRKSVPASYLTG 89
>UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12;
Archaea|Rep: 50S ribosomal protein L18P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 174
Score = 59.3 bits (137), Expect = 1e-07
Identities = 34/88 (38%), Positives = 51/88 (57%)
Frame = +2
Query: 104 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 283
RY+V F+RRREG+T+Y+ R +L++ ++ R++VR S ++V Q+ EGD
Sbjct: 6 RYKVPFRRRREGRTNYHLRLKLLLSGQD-------RVVVRKSARNVQIQLLAPTPEGDIT 58
Query: 284 VCAAYSHELPRYGVKVGLTNYAAAYSTG 367
+A S EL +YG N AAY TG
Sbjct: 59 YSSAVSSELAKYGYTGATGNTTAAYLTG 86
Score = 39.5 bits (88), Expect = 0.11
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +2
Query: 497 LDVGLARTTTGAXVFGAMKGAVDXGLNVPHSIKRFPGXDAESXKFXAE 640
LD+GL ++ G+ V+ A+KG VD G +P S FP + + AE
Sbjct: 103 LDIGLQASSAGSRVYAALKGIVDSGFEIPCSSDVFPSDERIRGEHIAE 150
>UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus
musculus|Rep: PREDICTED: cadherin 18 - Mus musculus
Length = 339
Score = 56.0 bits (129), Expect = 1e-06
Identities = 22/32 (68%), Positives = 30/32 (93%)
Frame = +2
Query: 110 QVKFKRRREGKTDYYARKRLVVQDKNKYNTPK 205
+++F+R +EGKTDYYARKRL +QDKN+YNTP+
Sbjct: 36 KLRFRRWQEGKTDYYARKRLEIQDKNEYNTPE 67
>UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr16 scaffold_10, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 128
Score = 56.0 bits (129), Expect = 1e-06
Identities = 28/73 (38%), Positives = 43/73 (58%)
Frame = +2
Query: 446 EYNVEPVDXGPGAXRCXLDVGLARTTTGAXVFGAMKGAVDXGLNVPHSIKRFPGXDAESX 625
+Y+VE + G L+VGL +T+ G VFG +K A+D LN+PH+ +RF G ++
Sbjct: 43 DYSVESTN-GKRPFYAFLNVGLVKTSIGNCVFGVLKEALDGSLNIPHNDRRFVGSSKDNK 101
Query: 626 KFXAEVXRAPIXG 664
+ A+V R I G
Sbjct: 102 QLDAKVHRKSIYG 114
>UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3;
Thermoplasma|Rep: 50S ribosomal protein L18P -
Thermoplasma acidophilum
Length = 163
Score = 42.3 bits (95), Expect(2) = 3e-06
Identities = 32/84 (38%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +2
Query: 119 FKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVA-YSRIEGDHIVCAA 295
FKR+ G TDY R +L+ + + K R IVR++ K V QVA YS I GD I+
Sbjct: 6 FKRKEAGITDYSKRLKLL-KSREK------RFIVRITGKGVIAQVAEYSDI-GDRILFTV 57
Query: 296 YSHELPRYGVKVGLTNYAAAYSTG 367
L +YGV + N Y G
Sbjct: 58 TDKTLAKYGVDLRGNNIQVCYLVG 81
Score = 31.9 bits (69), Expect(2) = 3e-06
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +2
Query: 479 GAXRCXLDVGLARTTTGAXVFGAMKGAVDXGLNVPHSIKRFP 604
G LD G + G + +KG D G+ VPH FP
Sbjct: 92 GVESAVLDTGRRKFRKGGRIAACLKGFTDAGIEVPHGEDVFP 133
>UniRef50_Q3LVV6 Cluster: Ribosomal protein L5; n=1; Bigelowiella
natans|Rep: Ribosomal protein L5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 252
Score = 47.6 bits (108), Expect = 4e-04
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 2/104 (1%)
Frame = +2
Query: 62 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYAR--KRLVVQDKNKYNTPKYRLIVRLSNK 235
M + K++KN YF ++ VK +R R+ T Y R + NK + K+R +N
Sbjct: 1 MIYQKIIKNASYFSKFVVKHRRNRKFLTKYGKSYDSRFLKSYTNK--SKKFRSYFTTTNT 58
Query: 236 DVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 367
+++ + +S + GD IV A S +L ++G+ N +Y G
Sbjct: 59 NLSGVITFSSLSGDTIVAKASSMDLIKFGLIHSKKNLINSYFIG 102
>UniRef50_A0RUE8 Cluster: Ribosomal protein L18; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L18 - Cenarchaeum
symbiosum
Length = 159
Score = 35.5 bits (78), Expect(2) = 0.072
Identities = 22/82 (26%), Positives = 43/82 (52%)
Frame = +2
Query: 122 KRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYS 301
+R RE KT+Y ++R ++ + + T V +SN++ Q+ +++GD ++ + +S
Sbjct: 8 RRLREEKTNY-KKRRSMLMGRRDFVT------VHISNENAQVQIHAPKMDGDVVIASGHS 60
Query: 302 HELPRYGVKVGLTNYAAAYSTG 367
L G K + A+Y TG
Sbjct: 61 RYLASKGWKGSRKSIPASYLTG 82
Score = 23.8 bits (49), Expect(2) = 0.072
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +2
Query: 479 GAXRCXLDVGLARTTTGAXVFGAMKGAVDXGLNVPHSIKRFP 604
GA + G R T + A+KG D G++VP FP
Sbjct: 93 GAKSAIMYTGTRRYTD--RISAALKGVSDAGVDVPIDPSTFP 132
>UniRef50_Q6L1A8 Cluster: 50S ribosomal protein L18P; n=2;
Thermoplasmatales|Rep: 50S ribosomal protein L18P -
Picrophilus torridus
Length = 158
Score = 36.7 bits (81), Expect = 0.77
Identities = 22/65 (33%), Positives = 33/65 (50%)
Frame = +2
Query: 122 KRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYS 301
KRRREG TDY R RLV+ + R ++R + K + Q+ EGDH++ +
Sbjct: 8 KRRREGVTDYRKRYRLVISRET-------RAVIRQTRKGLIIQLVDYVPEGDHVLVTVTN 60
Query: 302 HELPR 316
L +
Sbjct: 61 KTLKK 65
>UniRef50_Q9K4U6 Cluster: 15,16-dihydrobiliverdin:ferredoxin
oxidoreductase; n=1; Prochlorococcus marinus|Rep:
15,16-dihydrobiliverdin:ferredoxin oxidoreductase -
Prochlorococcus marinus
Length = 241
Score = 34.7 bits (76), Expect = 3.1
Identities = 18/65 (27%), Positives = 35/65 (53%)
Frame = +2
Query: 62 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 241
+ F +V+ ++YF RY + + D+ ++K + + D NKY +P + L+ S D+
Sbjct: 102 LDFQPLVQEERYFCRYYKDLQILKNRFVDFNSQKTMKIYDSNKYFSP-WVLLYNGSFDDL 160
Query: 242 TCQVA 256
C +A
Sbjct: 161 QCSLA 165
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 667,565,122
Number of Sequences: 1657284
Number of extensions: 11650305
Number of successful extensions: 29854
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 26889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29479
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 77472727479
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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