Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_P17
(1107 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 40 6e-04
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 38 0.003
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 38 0.003
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 37 0.006
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 34 0.041
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 33 0.054
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 32 0.16
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 31 0.22
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 31 0.29
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 30 0.50
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 28 2.0
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 28 2.7
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 23 5.6
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 39.9 bits (89), Expect = 6e-04
Identities = 17/39 (43%), Positives = 17/39 (43%)
Frame = +3
Query: 756 TPPPXXXLPPPPTPXPXXAPPXXPPQXPHXXGXPPXPPP 872
TP P PPP P PP PP G PP PPP
Sbjct: 743 TPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 37.5 bits (83), Expect = 0.003
Identities = 17/34 (50%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
Frame = +3
Query: 780 PPPPT---PXPXXAPPXXPPQXPHXXGXPPXPPP 872
PPPP P P AP PP P G PP PPP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP 767
Score = 37.1 bits (82), Expect = 0.004
Identities = 20/49 (40%), Positives = 21/49 (42%), Gaps = 7/49 (14%)
Frame = +3
Query: 759 PPPXXXLPPP---PTPXPXXAP----PXXPPQXPHXXGXPPXPPPXXXP 884
PPP +P P P P P AP P PP P G P PPP P
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 34.3 bits (75), Expect = 0.031
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = +2
Query: 596 PTXXXXSFPPPPPPXXXXGPLXPPPXXSXSFXXPKKTPXPP 718
PT P PPP GP PPP + P P PP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 29.9 bits (64), Expect = 0.66
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +1
Query: 814 PRXXPPNXPXSXGGPPXPPPHXXPXXPPPAXXP 912
P PP P G PP PPP PP P
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 27.9 bits (59), Expect = 2.7
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -2
Query: 356 PPPPXXGWXIFPPKXXPPXPPRXXLGG 276
PPPP G P PP PP GG
Sbjct: 763 PPPPPPGVAGAGPPPPPPPPPAVSAGG 789
Score = 26.2 bits (55), Expect = 8.2
Identities = 12/25 (48%), Positives = 13/25 (52%), Gaps = 3/25 (12%)
Frame = +2
Query: 620 PPPPPPXXXXG---PLXPPPXXSXS 685
PPPPPP G P PPP + S
Sbjct: 762 PPPPPPPGVAGAGPPPPPPPPPAVS 786
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 37.9 bits (84), Expect = 0.003
Identities = 20/66 (30%), Positives = 24/66 (36%), Gaps = 1/66 (1%)
Frame = +3
Query: 678 LXPSXXXKKPPXPXSSXFXXXXXXXXTPPPXXXLPPPPTPXPXXA-PPXXPPQXPHXXGX 854
+ P+ PP S PPP +PPPP+ P A PP PP
Sbjct: 1681 MAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSA 1740
Query: 855 PPXPPP 872
P P P
Sbjct: 1741 PSVPNP 1746
Score = 34.7 bits (76), Expect = 0.023
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = +3
Query: 762 PPXXXLPPPPTPXPXXAPPXXPPQXPHXXGXPPXPPPXXXP 884
PP P PP P P PP PP P PP PP P
Sbjct: 1699 PPQMSAPTPPPP-PMSVPP--PPSAPPMPAGPPSAPPPPLP 1736
Score = 27.5 bits (58), Expect = 3.5
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +2
Query: 614 SFPPPPPPXXXXGPLXPPPXXSXSFXXPKKTPXPPL 721
S P PPPP + PPP P P PPL
Sbjct: 1703 SAPTPPPPPMS---VPPPPSAPPMPAGPPSAPPPPL 1735
Score = 27.1 bits (57), Expect = 4.7
Identities = 14/38 (36%), Positives = 16/38 (42%), Gaps = 4/38 (10%)
Frame = +1
Query: 814 PRXXPPNXPXSXGGP----PXPPPHXXPXXPPPAXXPV 915
P PP P S P P PPP PPP+ P+
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPM 1723
Score = 27.1 bits (57), Expect = 4.7
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +1
Query: 826 PPNXPXSXGGPPXPPPHXXPXXPPPA 903
PP+ P GPP PP P P+
Sbjct: 1717 PPSAPPMPAGPPSAPPPPLPASSAPS 1742
Score = 26.2 bits (55), Expect = 8.2
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +1
Query: 826 PPNXPXSXGGPPXPPPHXXPXXPPPAXXP 912
PP P S PP PP P PP A P
Sbjct: 1707 PPPPPMSVPPPPSAPP--MPAGPPSAPPP 1733
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 37.9 bits (84), Expect = 0.003
Identities = 21/61 (34%), Positives = 21/61 (34%), Gaps = 1/61 (1%)
Frame = +3
Query: 705 PPXPXSSXFXXXXXXXXTPP-PXXXLPPPPTPXPXXAPPXXPPQXPHXXGXPPXPPPXXX 881
PP P S TPP P P P P AP P P G PP P P
Sbjct: 1032 PPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGI 1091
Query: 882 P 884
P
Sbjct: 1092 P 1092
Score = 35.1 bits (77), Expect = 0.018
Identities = 18/46 (39%), Positives = 19/46 (41%), Gaps = 4/46 (8%)
Frame = +3
Query: 759 PPPXXXLPPPPTPX---PXXAPPXXPPQXPHXX-GXPPXPPPXXXP 884
P P +PP P P P PP P P G PP PPP P
Sbjct: 1172 PAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAP 1217
Score = 34.3 bits (75), Expect = 0.031
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +1
Query: 811 PPRXXPPNXPXSXGGPPXPPPHXXPXXPPPA 903
PP PP S G PP PPP P P P+
Sbjct: 1193 PPSEAPPVPKPSVGVPPVPPPSTAPPVPTPS 1223
Score = 32.7 bits (71), Expect = 0.094
Identities = 21/73 (28%), Positives = 23/73 (31%), Gaps = 5/73 (6%)
Frame = +3
Query: 669 PXFLXPSXXXKKPPXPXSSXFXXXXXXXXTPPPXXXLPPPPTPXPXXAPPXXPPQ----- 833
P PS P P + P P + PP P P APP P
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPP 1151
Query: 834 XPHXXGXPPXPPP 872
P G PP P P
Sbjct: 1152 VPAPSGAPPVPKP 1164
Score = 31.9 bits (69), Expect = 0.16
Identities = 17/47 (36%), Positives = 17/47 (36%), Gaps = 5/47 (10%)
Frame = +3
Query: 759 PPPXXXLPPPPTPXPXXAPP-----XXPPQXPHXXGXPPXPPPXXXP 884
P P PP P P APP PP G P PPP P
Sbjct: 1023 PVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAP 1069
Score = 31.9 bits (69), Expect = 0.16
Identities = 20/68 (29%), Positives = 22/68 (32%)
Frame = +3
Query: 669 PXFLXPSXXXKKPPXPXSSXFXXXXXXXXTPPPXXXLPPPPTPXPXXAPPXXPPQXPHXX 848
P PS P P + P P + PP P P APP P
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPS----A 1224
Query: 849 GXPPXPPP 872
G PP P P
Sbjct: 1225 GLPPVPVP 1232
Score = 31.1 bits (67), Expect = 0.29
Identities = 19/56 (33%), Positives = 21/56 (37%)
Frame = +3
Query: 705 PPXPXSSXFXXXXXXXXTPPPXXXLPPPPTPXPXXAPPXXPPQXPHXXGXPPXPPP 872
PP P SS PPP +P P + P P P P G PP P P
Sbjct: 1050 PPVPKSSS-----GAPSAPPP---VPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKP 1097
Score = 31.1 bits (67), Expect = 0.29
Identities = 23/75 (30%), Positives = 23/75 (30%), Gaps = 8/75 (10%)
Frame = +3
Query: 684 PSXXXKKPPXPXSSXFXXXXXXXXTPPPXXXLP-PPPTPXPXXAPPXXP------PQXPH 842
P PP P S PP PP P P A P P P P
Sbjct: 1124 PKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPK 1183
Query: 843 XX-GXPPXPPPXXXP 884
G PP PPP P
Sbjct: 1184 PAAGVPPVPPPSEAP 1198
Score = 30.3 bits (65), Expect = 0.50
Identities = 19/62 (30%), Positives = 20/62 (32%), Gaps = 2/62 (3%)
Frame = +3
Query: 705 PPXPXSSXFXXXXXXXXTPPPXXX--LPPPPTPXPXXAPPXXPPQXPHXXGXPPXPPPXX 878
PP P S PP + PP P P APP P PP P P
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSV----AAPPVPVPSG 1138
Query: 879 XP 884
P
Sbjct: 1139 AP 1140
Score = 29.9 bits (64), Expect = 0.66
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +1
Query: 811 PPRXXPPNXPXSXGGPPXPPPHXXPXXPPPA 903
P PP + G PP PPP P P P+
Sbjct: 1174 PSSGIPPVPKPAAGVPPVPPPSEAPPVPKPS 1204
Score = 28.3 bits (60), Expect = 2.0
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = +1
Query: 814 PRXXPPNXPXSXGGPPXPPPHXXPXXPPPA 903
P P+ P G PP P P P P P+
Sbjct: 1069 PSSEIPSIPAPSGAPPVPAPSGIPPVPKPS 1098
Score = 27.1 bits (57), Expect = 4.7
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = +1
Query: 814 PRXXPPNXPXSXGGPPXPPPHXXPXXPPPA 903
P PP S PP P P P P P+
Sbjct: 1136 PSGAPPVPKPSVAAPPVPAPSGAPPVPKPS 1165
Score = 27.1 bits (57), Expect = 4.7
Identities = 14/35 (40%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = +1
Query: 811 PPRXXPPNXPXSXGGPPXP-PPHXXPXXPPPAXXP 912
P PP S G PP P P P PPP+ P
Sbjct: 1164 PSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAP 1198
Score = 26.6 bits (56), Expect = 6.2
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = +1
Query: 814 PRXXPPNXPXSXGGPPXPPPHXXPXXPPPA 903
P PP S PP P P P P P+
Sbjct: 1117 PSGAPPVPKPSVAAPPVPVPSGAPPVPKPS 1146
Score = 26.6 bits (56), Expect = 6.2
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = +1
Query: 811 PPRXXPPNXPXSXGGPPXPPPHXXPXXPPPAXXP 912
P PP P S P P P PPP+ P
Sbjct: 1184 PAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAP 1217
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 36.7 bits (81), Expect = 0.006
Identities = 18/38 (47%), Positives = 19/38 (50%)
Frame = -3
Query: 871 GGGXGGXPXXWGXWGGXXGGAXXGXGVGGGGRXXXGGG 758
GGG GG G +GG GG G G GGG GGG
Sbjct: 227 GGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGG 264
Score = 31.9 bits (69), Expect = 0.16
Identities = 16/32 (50%), Positives = 16/32 (50%)
Frame = -2
Query: 896 GGXFGXXXGGGXGGPPXXMGXLGGXXRGGXXG 801
GG FG GGG GGPP G GG G G
Sbjct: 187 GGGFGG-FGGGSGGPPPGPGGFGGFGGFGGEG 217
Score = 31.9 bits (69), Expect = 0.16
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = -3
Query: 868 GGXGGXPXXWGXWGGXXGGAXXGXGVGGGGRXXXGGGV 755
GG G G +GG GG G G GGG GGG+
Sbjct: 214 GGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGL 251
Score = 31.9 bits (69), Expect = 0.16
Identities = 19/45 (42%), Positives = 19/45 (42%)
Frame = -2
Query: 935 GXXGGGXTGXXAGGGXFGXXXGGGXGGPPXXMGXLGGXXRGGXXG 801
G GG G G G F GG GGP G LGG GG G
Sbjct: 217 GHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFG-GGPGG 260
Score = 31.5 bits (68), Expect = 0.22
Identities = 17/38 (44%), Positives = 18/38 (47%)
Frame = -3
Query: 871 GGGXGGXPXXWGXWGGXXGGAXXGXGVGGGGRXXXGGG 758
GGG GG P G +GG G G G GG GGG
Sbjct: 194 GGGSGGPPPGPGGFGGF--GGFGGEGHHHGGHGGFGGG 229
Score = 31.5 bits (68), Expect = 0.22
Identities = 17/36 (47%), Positives = 18/36 (50%)
Frame = -3
Query: 868 GGXGGXPXXWGXWGGXXGGAXXGXGVGGGGRXXXGG 761
GG GG P G +GG GG G G GGG GG
Sbjct: 238 GGFGGGP---GGFGGGLGGFGGGPGGFGGGPGGHGG 270
Score = 30.7 bits (66), Expect = 0.38
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -2
Query: 935 GXXGGGXTGXXAGGGXFGXXXGGGXGGP 852
G GGG G G G FG GG GGP
Sbjct: 238 GGFGGGPGGFGGGLGGFGGGPGGFGGGP 265
Score = 29.9 bits (64), Expect = 0.66
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -3
Query: 871 GGGXGGXPXXWGXWGGXXGGAXXGXGVGGG 782
GGG GG G +GG GG G G GG
Sbjct: 241 GGGPGGFGGGLGGFGGGPGGFGGGPGGHGG 270
Score = 26.6 bits (56), Expect = 6.2
Identities = 19/48 (39%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Frame = -2
Query: 938 GGXXGG--GXTGXXAGGGXFGXXXGGGXGGPPXXMGXLGGXXRGGXXG 801
GG GG G G G G GGG GG G GG GG G
Sbjct: 224 GGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGP-GGHGG 270
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 33.9 bits (74), Expect = 0.041
Identities = 20/67 (29%), Positives = 22/67 (32%)
Frame = +3
Query: 684 PSXXXKKPPXPXSSXFXXXXXXXXTPPPXXXLPPPPTPXPXXAPPXXPPQXPHXXGXPPX 863
P+ +P P S PP LPPP P AP PP P P
Sbjct: 140 PTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQP---AAPVKSPPSAPSLPSAVPP 196
Query: 864 PPPXXXP 884
PP P
Sbjct: 197 MPPKVPP 203
Score = 27.5 bits (58), Expect = 3.5
Identities = 14/43 (32%), Positives = 16/43 (37%)
Frame = +3
Query: 759 PPPXXXLPPPPTPXPXXAPPXXPPQXPHXXGXPPXPPPXXXPK 887
PP PP P+ P A P P + P P P PK
Sbjct: 158 PPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPK 200
Score = 26.6 bits (56), Expect = 6.2
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +3
Query: 780 PPPPTPXPXXAPPXXPPQXPHXXGXPPXPPPXXXP 884
P PPTP PP P P PP P P
Sbjct: 128 PAPPTPQSELRPPTSAPPRP---SIPPPSPASAPP 159
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 33.5 bits (73), Expect = 0.054
Identities = 19/62 (30%), Positives = 20/62 (32%)
Frame = +3
Query: 699 KKPPXPXSSXFXXXXXXXXTPPPXXXLPPPPTPXPXXAPPXXPPQXPHXXGXPPXPPPXX 878
+ PP P S LPPPP P P P P PP PPP
Sbjct: 310 RPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPP-PRSNAAGSIPLPPQGRSAPPPPPPRS 368
Query: 879 XP 884
P
Sbjct: 369 AP 370
Score = 31.5 bits (68), Expect = 0.22
Identities = 22/68 (32%), Positives = 22/68 (32%)
Frame = +3
Query: 669 PXFLXPSXXXKKPPXPXSSXFXXXXXXXXTPPPXXXLPPPPTPXPXXAPPXXPPQXPHXX 848
P L PS PP S PP PP P P A P PP P
Sbjct: 420 PPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMP--AAPPLPPAAP--- 474
Query: 849 GXPPXPPP 872
PP P P
Sbjct: 475 APPPAPAP 482
Score = 30.3 bits (65), Expect = 0.50
Identities = 14/40 (35%), Positives = 15/40 (37%), Gaps = 2/40 (5%)
Frame = +3
Query: 759 PPPXXXLPPPPTPXPXXAPPXXPP--QXPHXXGXPPXPPP 872
PP PPPP P + PP PP PPP
Sbjct: 354 PPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPP 393
Score = 29.1 bits (62), Expect = 1.2
Identities = 14/37 (37%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Frame = +3
Query: 762 PPXXXLPPPPTPXPXXAPPXXPPQXP-HXXGXPPXPP 869
PP P P P PP PP P PP PP
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPP 451
Score = 28.3 bits (60), Expect = 2.0
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +3
Query: 756 TPPPXXXLPPPPTPXPXXAPPXXPPQXPH--XXGXPPXPP 869
TPP +P PP+ P APP PP P G P PP
Sbjct: 414 TPP----VPTPPS-LPPSAPPSLPPSAPPSLPMGAPAAPP 448
Score = 27.5 bits (58), Expect = 3.5
Identities = 15/59 (25%), Positives = 18/59 (30%)
Frame = +3
Query: 708 PXPXSSXFXXXXXXXXTPPPXXXLPPPPTPXPXXAPPXXPPQXPHXXGXPPXPPPXXXP 884
P P S + PP + P P + P PP PP PP P
Sbjct: 418 PTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAP 476
Score = 26.6 bits (56), Expect = 6.2
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +3
Query: 762 PPXXXLPPPPTPXPXXAPPXXPPQXPHXXGXPPXPPP 872
P PP P P PP P PP PPP
Sbjct: 224 PTSTSAPPIPPSIPSSRPPERVPSL-SAPAPPPIPPP 259
Score = 26.6 bits (56), Expect = 6.2
Identities = 17/65 (26%), Positives = 21/65 (32%)
Frame = +3
Query: 678 LXPSXXXKKPPXPXSSXFXXXXXXXXTPPPXXXLPPPPTPXPXXAPPXXPPQXPHXXGXP 857
+ PS +PP S P PP +P AP P + P
Sbjct: 232 IPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAI-NSTSKP 290
Query: 858 PXPPP 872
P PPP
Sbjct: 291 PLPPP 295
Score = 26.6 bits (56), Expect = 6.2
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +2
Query: 614 SFPPPPPPXXXXGPLXPPPXXSXSFXXPKKTPXPP 718
S PPPPPP PP S S P PP
Sbjct: 359 SAPPPPPPRSAPSTGRQPPPLSSS-RAVSNPPAPP 392
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 31.9 bits (69), Expect = 0.16
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +2
Query: 620 PPPPPPXXXXGPLXPPPXXSXSFXXPKKTPXP 715
PPPPPP P PPP + +K P
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPPGYVKKRKNKTP 41
Score = 31.5 bits (68), Expect = 0.22
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 780 PPPPTPXPXXAPPXXPPQXP 839
PPPP P P PP PP P
Sbjct: 9 PPPPPPPPGFEPPSQPPPPP 28
Score = 30.3 bits (65), Expect = 0.50
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 422 PPPXPPXXXTPXXXXPPHPPXGGXXKNXXGGP 517
PPP PP P PP PP G K P
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPPGYVKKRKNKTP 41
Score = 29.1 bits (62), Expect = 1.2
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = +3
Query: 777 LPPPPTPXPXXAPPXXPPQXPHXXGXPPXPPPXXXPK 887
LPP P P P PP P PP PPP K
Sbjct: 4 LPPGNPPPPPPPPGFEPPSQP-----PPPPPPGYVKK 35
Score = 28.7 bits (61), Expect = 1.5
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 413 PXXPPPXPPXXXTPXXXXPPHPPXGGXXK 499
P PPP PP PP PP G K
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPPGYVK 34
Score = 28.3 bits (60), Expect = 2.0
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 857 PXPPPXTXPQXXXPPPXPP 913
P PPP P PPP PP
Sbjct: 12 PPPPPGFEPPSQPPPPPPP 30
Score = 27.5 bits (58), Expect = 3.5
Identities = 12/25 (48%), Positives = 12/25 (48%), Gaps = 2/25 (8%)
Frame = +3
Query: 762 PPXXXLPPPPTP--XPXXAPPXXPP 830
PP PPPP P P PP PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 27.5 bits (58), Expect = 3.5
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -2
Query: 356 PPPPXXGWXIFPPKXXPPXPP 294
PPPP G+ PP PP PP
Sbjct: 11 PPPPPPGFE--PPSQPPPPPP 29
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 31.5 bits (68), Expect = 0.22
Identities = 19/38 (50%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = -3
Query: 868 GGXGGXPXXWGXWGGXXGGAXXGXGVGG--GGRXXXGG 761
GG GG G +GG GGA G G GG GGR GG
Sbjct: 16 GGRGGFNGGRGGFGGGRGGA-RGGGRGGARGGRGGRGG 52
Score = 30.7 bits (66), Expect = 0.38
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = -3
Query: 883 GXXXGGGXGGXPXXWGXWGGXXGGAXXGXGVGGGGRXXXGG 761
G GG G G GG GGA G G GG R GG
Sbjct: 19 GGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGG 59
Score = 29.5 bits (63), Expect = 0.88
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = -3
Query: 871 GGGXGGXPXXWGXWGGXXGGAXXGXGVGGGGRXXXGGG 758
GG GG G GG GG G G GGR GG
Sbjct: 19 GGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGG 56
Score = 29.1 bits (62), Expect = 1.2
Identities = 19/42 (45%), Positives = 19/42 (45%)
Frame = -3
Query: 883 GXXXGGGXGGXPXXWGXWGGXXGGAXXGXGVGGGGRXXXGGG 758
G GGG GG G GG GGA G G GGR GG
Sbjct: 33 GGARGGGRGGAR---GGRGGR-GGARGGRGGSSGGRGGAKGG 70
Score = 27.9 bits (59), Expect = 2.7
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = -2
Query: 935 GXXGGGXTGXXAGGGXFGXXXGGGXGGPPXXMGXLGGXXRGGXXG 801
G GGG G GG GG GG G G RGG G
Sbjct: 26 GGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSG-GRGGAKG 69
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 31.1 bits (67), Expect = 0.29
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = -2
Query: 935 GXXGGGXTGXXAGGGXFGXXXGGGXGGPPXXMGXLGGXXRGGXXG 801
G GG G G FG GG GG G GG RGG G
Sbjct: 138 GGRGGFRGGRGGSRGGFGGNSRGGFGG--GSRGGFGGGSRGGSRG 180
Score = 30.7 bits (66), Expect = 0.38
Identities = 18/42 (42%), Positives = 18/42 (42%)
Frame = -3
Query: 883 GXXXGGGXGGXPXXWGXWGGXXGGAXXGXGVGGGGRXXXGGG 758
G GG GG G G GG G G GGG R GGG
Sbjct: 133 GPAGRGGRGGFRGGRGGSRGGFGGNSRG-GFGGGSRGGFGGG 173
Score = 27.5 bits (58), Expect = 3.5
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = -2
Query: 935 GXXGGGXTGXXAGGGXFGXXXGGGXGGPPXXMGXLGGXXRGGXXG 801
G GG G GGG G GG GG G G RGG G
Sbjct: 152 GGFGGNSRGGF-GGGSRGGFGGGSRGG---SRGGFRGGSRGGFRG 192
Score = 26.2 bits (55), Expect = 8.2
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -3
Query: 883 GXXXGGGXGGXPXXWGXWGGXXGGAXXGXGVGGGGRXXXGGG 758
G GG G G G GG G G GGG R GG
Sbjct: 141 GGFRGGRGGSRGGFGGNSRGGFGGGSRG-GFGGGSRGGSRGG 181
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 30.3 bits (65), Expect = 0.50
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +3
Query: 780 PPPPTPXPXXAPPXXPPQXPHXXGXPPXPPP 872
P PPTP P A PP P P PP
Sbjct: 729 PAPPTPAPTPAVKHHPPPPPVRSSISPSMPP 759
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 28.3 bits (60), Expect = 2.0
Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 4/38 (10%)
Frame = +2
Query: 620 PPPPPPXXXXGPL----XPPPXXSXSFXXPKKTPXPPL 721
PPPPPP P PP + P++ P PP+
Sbjct: 206 PPPPPPQQNYPPAASSSAPPMQYQQTAYPPQQAPYPPV 243
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 27.9 bits (59), Expect = 2.7
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +3
Query: 786 PPTPXPXXAPPXXPPQXPHXXGXPPXPPP 872
PP P P P PP PP PP
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPPAGPP 1910
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 22.6 bits (46), Expect(2) = 5.6
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = +2
Query: 845 RXXAPXPPPXTXPQXXXPPPXPP 913
R +P PP P+ P P PP
Sbjct: 217 RAVSPEIPPTYTPKQADPLPAPP 239
Score = 22.2 bits (45), Expect(2) = 5.6
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +2
Query: 989 PPPPPPXXXSXPP 1027
P PPPP + PP
Sbjct: 236 PAPPPPPPPTLPP 248
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,393,350
Number of Sequences: 5004
Number of extensions: 36821
Number of successful extensions: 670
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 442
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 585701508
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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