Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_P14
         (879 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0659 - 5021159-5021266,5021364-5021494,5021619-5021785,502...    33   0.30 
05_03_0515 + 14930736-14932697                                         30   2.8  
04_04_0347 + 24564589-24565296                                         29   3.7  
11_06_0645 - 25814302-25814759,25814853-25815005,25815032-258152...    29   6.5  
09_02_0414 - 8825575-8826654,8826737-8827144                           28   8.6  

>01_01_0659 -
           5021159-5021266,5021364-5021494,5021619-5021785,
           5021950-5022065,5022226-5022381,5022570-5022678,
           5023153-5023262,5023807-5023992,5024077-5024667
          Length = 557

 Score = 33.1 bits (72), Expect = 0.30
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +1

Query: 289 KFPSIINEGRVEGDKYQISIHLPGYEQKDINVK 387
           K   ++ E +VEGD Y + +H PG+  K ++V+
Sbjct: 216 KDDEVVKEEKVEGDGYSLGLHAPGFFDKVLHVE 248


>05_03_0515 + 14930736-14932697
          Length = 653

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 15/65 (23%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
 Frame = +1

Query: 88  IALVLCGLLAAVSAAPQYYHGSSHWPYHHYDPFSPYVRESM-XDTHSLWSNLANEMQHLD 264
           + L +C +   V  +P  +    +W YH     + YV +S+  ++ S WSN   +   L 
Sbjct: 308 LCLEVCAIFFMVMMSPWTWASLQYWKYHRLADAAWYVFKSLQTESMSWWSNSLGQYNFLS 367

Query: 265 DMMKE 279
               +
Sbjct: 368 SCFSD 372


>04_04_0347 + 24564589-24565296
          Length = 235

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +1

Query: 85  MIALVLCGLLAAVSAAPQYYHGSSHWPY-HHYDPF 186
           M  L+   LLAA SAA   +H  ++ PY HH+ P+
Sbjct: 5   MSMLLASSLLAAASAARADHHSPAYAPYPHHHAPW 39


>11_06_0645 -
           25814302-25814759,25814853-25815005,25815032-25815214,
           25815342-25815531,25815624-25815784,25816136-25816623,
           25817035-25817075
          Length = 557

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 15/53 (28%), Positives = 25/53 (47%)
 Frame = +1

Query: 301 IINEGRVEGDKYQISIHLPGYEQKDINVKAXNGVLMVQAXSAFNHYLKIQNLP 459
           I ++G++EG +  I  H+P  E  D+ V + +   +    S   H  K  N P
Sbjct: 351 ISSKGQLEGIQVVIDPHVPSVESVDMPVSSMDNSTLEVFSSQQQHSFKCNNTP 403


>09_02_0414 - 8825575-8826654,8826737-8827144
          Length = 495

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = +1

Query: 199 RESMXDTHSLWSNLANEMQHLDDMMKELSLKFPSIINEGRVEGDK 333
           R  +    + W  + N++ H +D    +  K+PS  +EG  + DK
Sbjct: 166 RREVKHLKNRWQRMINKVAHFNDCWCRVMAKYPSGQSEGMQQMDK 210


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,337,722
Number of Sequences: 37544
Number of extensions: 413136
Number of successful extensions: 1004
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 986
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1004
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)