BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_P11
(1184 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. 24 10.0
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 24 10.0
>DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein.
Length = 889
Score = 23.8 bits (49), Expect = 10.0
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = -1
Query: 854 PXPXPXHXXAAXPPLPXPPXXXXPP 780
P P A PP P PP PP
Sbjct: 570 PAGFPNLPNAQPPPAPPPPPPMGPP 594
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 23.8 bits (49), Expect = 10.0
Identities = 14/51 (27%), Positives = 14/51 (27%)
Frame = +1
Query: 799 GGXGXGGXAAXXCXGXGXGXVWGXRGGSRXXXXXSXSXXXXXGGGXAXGXG 951
GG G G G G G GG R GG G G
Sbjct: 205 GGSGGGAPGGGGGSSGGPGPGGGGGGGGRDRDHRDRDREREGGGNGGGGGG 255
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.316 0.143 0.482
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 337,272
Number of Sequences: 2352
Number of extensions: 2989
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 134069016
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
- SilkBase 1999-2023 -