Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_P11
(1184 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 37 0.032
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 37 0.032
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 33 0.39
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 31 1.2
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 31 1.2
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 1.6
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 31 1.6
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 2.1
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 2.1
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 30 2.8
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 29 4.9
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 29 6.4
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 29 6.4
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 8.5
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 8.5
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 8.5
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 36.7 bits (81), Expect = 0.032
Identities = 23/68 (33%), Positives = 23/68 (33%)
Frame = +1
Query: 781 GGXXXXGGXGXGGXAAXXCXGXGXGXVWGXRGGSRXXXXXSXSXXXXXGGGXAXGXGXSS 960
GG GG G G C G G G G GGS S GGG G G
Sbjct: 113 GGGGCGGGGGGCGGGGGGCGGGGGG---GCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGG 169
Query: 961 XXXXGXSG 984
G SG
Sbjct: 170 GCGGGSSG 177
Score = 33.1 bits (72), Expect = 0.39
Identities = 23/69 (33%), Positives = 23/69 (33%), Gaps = 1/69 (1%)
Frame = +1
Query: 781 GGXXXXGGXGXGGXAAXXCXGXGXGXVWGXRG-GSRXXXXXSXSXXXXXGGGXAXGXGXS 957
GG GG G GG C G G G G G G GGG G G S
Sbjct: 87 GGGCGGGGGGCGGGGG--CGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSS 144
Query: 958 SXXXXGXSG 984
G SG
Sbjct: 145 GGCGGGSSG 153
Score = 31.1 bits (67), Expect = 1.6
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = +1
Query: 781 GGXXXXGGXGXGGXAAXXCXGXGXGXVWGXRGGSRXXXXXSXSXXXXXGGGXAXGXG 951
GG GG G GG G G G G GG GGG G G
Sbjct: 80 GGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGG 136
Score = 31.1 bits (67), Expect = 1.6
Identities = 16/51 (31%), Positives = 18/51 (35%)
Frame = +1
Query: 781 GGXXXXGGXGXGGXAAXXCXGXGXGXVWGXRGGSRXXXXXSXSXXXXXGGG 933
GG GG G GG ++ C G G G GG GGG
Sbjct: 129 GGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGG 179
Score = 31.1 bits (67), Expect = 1.6
Identities = 19/68 (27%), Positives = 22/68 (32%)
Frame = +1
Query: 781 GGXXXXGGXGXGGXAAXXCXGXGXGXVWGXRGGSRXXXXXSXSXXXXXGGGXAXGXGXSS 960
GG G GG C G G G G G + S GGG + G G +
Sbjct: 145 GGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGG-GGYAVAPSGGGGCGGGGSSGGGGYA 203
Query: 961 XXXXGXSG 984
G G
Sbjct: 204 VAPSGGGG 211
Score = 28.7 bits (61), Expect = 8.5
Identities = 31/117 (26%), Positives = 32/117 (27%), Gaps = 3/117 (2%)
Frame = +1
Query: 643 GGGXXSPAVACRXXXGGXXXXLXPXPPARLXXRXXXXXXGXXXXXXGGXXXXGGXGXG-G 819
GGG C GG P P G GG GG G G G
Sbjct: 56 GGGCGGGGGGC----GGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCG 111
Query: 820 XAAXXCXGXGXGXVW--GXRGGSRXXXXXSXSXXXXXGGGXAXGXGXSSXXXXGXSG 984
C G G G G GG S GGG + G G G G
Sbjct: 112 GGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGS-SGGCGGGSSGGCGGGGGGGCGGGG 167
Score = 28.7 bits (61), Expect = 8.5
Identities = 18/67 (26%), Positives = 19/67 (28%)
Frame = +1
Query: 781 GGXXXXGGXGXGGXAAXXCXGXGXGXVWGXRGGSRXXXXXSXSXXXXXGGGXAXGXGXSS 960
GG G G GG A G G G GG GGG + G
Sbjct: 189 GGCGGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYASAPSGGGGYATSGGGGSGGYATGG 248
Query: 961 XXXXGXS 981
G S
Sbjct: 249 SSGGGYS 255
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 36.7 bits (81), Expect = 0.032
Identities = 23/68 (33%), Positives = 23/68 (33%)
Frame = +1
Query: 781 GGXXXXGGXGXGGXAAXXCXGXGXGXVWGXRGGSRXXXXXSXSXXXXXGGGXAXGXGXSS 960
GG GG G G C G G G G GGS S GGG G G
Sbjct: 113 GGGGCGGGGGGCGGGGGGCGGGGGG---GCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGG 169
Query: 961 XXXXGXSG 984
G SG
Sbjct: 170 GCGGGSSG 177
Score = 33.1 bits (72), Expect = 0.39
Identities = 23/69 (33%), Positives = 23/69 (33%), Gaps = 1/69 (1%)
Frame = +1
Query: 781 GGXXXXGGXGXGGXAAXXCXGXGXGXVWGXRG-GSRXXXXXSXSXXXXXGGGXAXGXGXS 957
GG GG G GG C G G G G G G GGG G G S
Sbjct: 87 GGGCGGGGGGCGGGGG--CGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSS 144
Query: 958 SXXXXGXSG 984
G SG
Sbjct: 145 GGCGGGSSG 153
Score = 31.1 bits (67), Expect = 1.6
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = +1
Query: 781 GGXXXXGGXGXGGXAAXXCXGXGXGXVWGXRGGSRXXXXXSXSXXXXXGGGXAXGXG 951
GG GG G GG G G G G GG GGG G G
Sbjct: 80 GGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGG 136
Score = 31.1 bits (67), Expect = 1.6
Identities = 16/51 (31%), Positives = 18/51 (35%)
Frame = +1
Query: 781 GGXXXXGGXGXGGXAAXXCXGXGXGXVWGXRGGSRXXXXXSXSXXXXXGGG 933
GG GG G GG ++ C G G G GG GGG
Sbjct: 129 GGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGG 179
Score = 31.1 bits (67), Expect = 1.6
Identities = 19/68 (27%), Positives = 22/68 (32%)
Frame = +1
Query: 781 GGXXXXGGXGXGGXAAXXCXGXGXGXVWGXRGGSRXXXXXSXSXXXXXGGGXAXGXGXSS 960
GG G GG C G G G G G + S GGG + G G +
Sbjct: 145 GGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGG-GGYAVAPSGGGGCGGGGSSGGGGYA 203
Query: 961 XXXXGXSG 984
G G
Sbjct: 204 VAPSGGGG 211
Score = 28.7 bits (61), Expect = 8.5
Identities = 31/117 (26%), Positives = 32/117 (27%), Gaps = 3/117 (2%)
Frame = +1
Query: 643 GGGXXSPAVACRXXXGGXXXXLXPXPPARLXXRXXXXXXGXXXXXXGGXXXXGGXGXG-G 819
GGG C GG P P G GG GG G G G
Sbjct: 56 GGGCGGGGGGC----GGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCG 111
Query: 820 XAAXXCXGXGXGXVW--GXRGGSRXXXXXSXSXXXXXGGGXAXGXGXSSXXXXGXSG 984
C G G G G GG S GGG + G G G G
Sbjct: 112 GGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGS-SGGCGGGSSGGCGGGGGGGCGGGG 167
Score = 28.7 bits (61), Expect = 8.5
Identities = 18/67 (26%), Positives = 19/67 (28%)
Frame = +1
Query: 781 GGXXXXGGXGXGGXAAXXCXGXGXGXVWGXRGGSRXXXXXSXSXXXXXGGGXAXGXGXSS 960
GG G G GG A G G G GG GGG + G
Sbjct: 189 GGCGGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYASAPSGGGGYATSGGGGSGGYATGG 248
Query: 961 XXXXGXS 981
G S
Sbjct: 249 SSGGGYS 255
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 33.1 bits (72), Expect = 0.39
Identities = 19/65 (29%), Positives = 19/65 (29%)
Frame = +1
Query: 781 GGXXXXGGXGXGGXAAXXCXGXGXGXVWGXRGGSRXXXXXSXSXXXXXGGGXAXGXGXSS 960
GG G G GG C G G G G GG GGG G G
Sbjct: 123 GGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGG 182
Query: 961 XXXXG 975
G
Sbjct: 183 GGGCG 187
Score = 32.7 bits (71), Expect = 0.52
Identities = 29/107 (27%), Positives = 29/107 (27%), Gaps = 4/107 (3%)
Frame = +1
Query: 643 GGGXXSPAVACRXXXGGXXXXLXPXPPARLXXRXXXXXXGXXXXXXGGXXXXGGXGXGGX 822
GGG C GG P PP G GG GG G GG
Sbjct: 89 GGGCGGGGGGC-GGGGGCGGGCAPPPPP---PACGGGCGGGGGGCGGGCGGGGGGGCGGG 144
Query: 823 AAXXCXGXGXGXVWGXRG----GSRXXXXXSXSXXXXXGGGXAXGXG 951
C G G G G G G GGG G G
Sbjct: 145 GGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGGGGGCGGGCG 191
Score = 29.9 bits (64), Expect = 3.7
Identities = 19/63 (30%), Positives = 19/63 (30%), Gaps = 1/63 (1%)
Frame = +1
Query: 799 GGXGXGGXAAXXC-XGXGXGXVWGXRGGSRXXXXXSXSXXXXXGGGXAXGXGXSSXXXXG 975
GG G GG C G G G G GG GGG G G G
Sbjct: 24 GGGGGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGG 83
Query: 976 XSG 984
G
Sbjct: 84 GCG 86
Score = 29.5 bits (63), Expect = 4.9
Identities = 26/100 (26%), Positives = 26/100 (26%), Gaps = 1/100 (1%)
Frame = +1
Query: 688 GGXXXXLXPXPPARLXXRXXXXXXGXXXXXXGGXXXXGGXGX-GGXAAXXCXGXGXGXVW 864
GG P PP G GG GG G GG G G G
Sbjct: 46 GGCGGGCAPPPPPPACG--GGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGG 103
Query: 865 GXRGGSRXXXXXSXSXXXXXGGGXAXGXGXSSXXXXGXSG 984
G GG GGG G G G G
Sbjct: 104 GCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGG 143
Score = 28.7 bits (61), Expect = 8.5
Identities = 22/77 (28%), Positives = 22/77 (28%), Gaps = 9/77 (11%)
Frame = +1
Query: 781 GGXXXXGGXGXGGXAA---------XXCXGXGXGXVWGXRGGSRXXXXXSXSXXXXXGGG 933
GG GG G GG A C G G G G GG GGG
Sbjct: 95 GGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGG 154
Query: 934 XAXGXGXSSXXXXGXSG 984
G G G G
Sbjct: 155 GCGGGGGGCGGGGGGCG 171
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 31.5 bits (68), Expect = 1.2
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +1
Query: 781 GGXXXXGGXGXGGXAAXXCXGXGXGXVWGXRGG 879
GG GG G GG C G G G G GG
Sbjct: 98 GGGGCGGGGGCGGGGGGGCGGGGGGGCGGGGGG 130
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 31.5 bits (68), Expect = 1.2
Identities = 20/68 (29%), Positives = 21/68 (30%)
Frame = +1
Query: 781 GGXXXXGGXGXGGXAAXXCXGXGXGXVWGXRGGSRXXXXXSXSXXXXXGGGXAXGXGXSS 960
GG GG G GG G G G +G GG GGG G G
Sbjct: 111 GGGYGGGGYGGGGDGGGGYGGYGGGG-YGGMGGGPGGYGMGGYGGGGGGGGDFGGYGGGG 169
Query: 961 XXXXGXSG 984
G G
Sbjct: 170 MGGGGYGG 177
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 31.1 bits (67), Expect = 1.6
Identities = 15/49 (30%), Positives = 17/49 (34%), Gaps = 1/49 (2%)
Frame = -1
Query: 950 PXPXAXPPPXXXXXXXXC-XXXXRXPPLXPHTXPXPXPXHXXAAXPPLP 807
P P PPP C PP+ P P P P PP+P
Sbjct: 34 PPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMP 82
Score = 30.7 bits (66), Expect = 2.1
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -1
Query: 854 PXPXPXHXXAAXPPLPXPPXXXXPPXXXXXXP 759
P P P A PPLP PP PP P
Sbjct: 29 PCPPPPPPMCAPPPLPCPPPPICPPQFCPPPP 60
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 31.1 bits (67), Expect = 1.6
Identities = 20/68 (29%), Positives = 21/68 (30%)
Frame = +1
Query: 781 GGXXXXGGXGXGGXAAXXCXGXGXGXVWGXRGGSRXXXXXSXSXXXXXGGGXAXGXGXSS 960
GG GG G GG G G G GG S GGG G G +
Sbjct: 53 GGGGGGGGGGGGGFGGGNGGFGGGGGGSGGGGGGNNIGSLVGSLIGGGGGGGNYGGGGGN 112
Query: 961 XXXXGXSG 984
G G
Sbjct: 113 QGGGGGGG 120
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 30.7 bits (66), Expect = 2.1
Identities = 23/79 (29%), Positives = 23/79 (29%), Gaps = 1/79 (1%)
Frame = -1
Query: 875 PLXPHTXPXPXPXHXXAAXPPLPXPPXXXXP-PXXXXXXPHXXXXXRXXSRAGGXGXRXX 699
P P P P P PP P PP P P P SR G G
Sbjct: 278 PPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMP----PPPPPSRFGPPGMGGM 333
Query: 698 XXPPXXXRHATAGXXXPPP 642
PP G PPP
Sbjct: 334 PPPPPPGMRYPGGMPPPPP 352
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 30.7 bits (66), Expect = 2.1
Identities = 23/79 (29%), Positives = 23/79 (29%), Gaps = 1/79 (1%)
Frame = -1
Query: 875 PLXPHTXPXPXPXHXXAAXPPLPXPPXXXXP-PXXXXXXPHXXXXXRXXSRAGGXGXRXX 699
P P P P P PP P PP P P P SR G G
Sbjct: 288 PPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMP----PPPPPSRFGPPGMGGM 343
Query: 698 XXPPXXXRHATAGXXXPPP 642
PP G PPP
Sbjct: 344 PPPPPPGMRYPGGMPPPPP 362
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 30.3 bits (65), Expect = 2.8
Identities = 18/62 (29%), Positives = 18/62 (29%)
Frame = +1
Query: 799 GGXGXGGXAAXXCXGXGXGXVWGXRGGSRXXXXXSXSXXXXXGGGXAXGXGXSSXXXXGX 978
GG G GG G G WG GG GGG G G G
Sbjct: 60 GGSGWGGGRGGGWGNNGGGGNWGGNGGG-GNGGGGRGGGGGGGGGRGGGGGGRGGGGGGG 118
Query: 979 SG 984
G
Sbjct: 119 GG 120
Score = 29.5 bits (63), Expect = 4.9
Identities = 18/62 (29%), Positives = 18/62 (29%)
Frame = +1
Query: 799 GGXGXGGXAAXXCXGXGXGXVWGXRGGSRXXXXXSXSXXXXXGGGXAXGXGXSSXXXXGX 978
GG G G G G G WG GG GGG G G G
Sbjct: 51 GGPGWGRGGGGSGWGGGRGGGWGNNGGG--GNWGGNGGGGNGGGGRGGGGGGGGGRGGGG 108
Query: 979 SG 984
G
Sbjct: 109 GG 110
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 29.5 bits (63), Expect = 4.9
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +1
Query: 799 GGXGXGGXAAXXCXGXGXGXVWGXRGGSRXXXXXSXSXXXXXGGGXAXGXG 951
GG G GG G G G G GG GGG G G
Sbjct: 76 GGGGYGGGHGGAAVGGGYGGAVGGGGGGGYGGGHGGGHGGAVGGGYGGGGG 126
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
protein R08B4.1b protein.
Length = 1160
Score = 29.1 bits (62), Expect = 6.4
Identities = 18/62 (29%), Positives = 19/62 (30%)
Frame = +1
Query: 799 GGXGXGGXAAXXCXGXGXGXVWGXRGGSRXXXXXSXSXXXXXGGGXAXGXGXSSXXXXGX 978
G G GG G G G G GGS S S GG G G +
Sbjct: 784 GSSGGGGGGGNGGSGGGGGGGGGGSGGSGGGGSNSNSGGGGGNGGGGNGGGGNGNGGGAG 843
Query: 979 SG 984
G
Sbjct: 844 DG 845
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 29.1 bits (62), Expect = 6.4
Identities = 19/75 (25%), Positives = 19/75 (25%)
Frame = -1
Query: 983 PDXPXXXXELXPXPXAXPPPXXXXXXXXCXXXXRXPPLXPHTXPXPXPXHXXAAXPPLPX 804
P P P PPP P H P P P PP P
Sbjct: 80 PAPPLASYPQNAVPVPAPPPAPYPQHAVPAPAPPPAPYPQHAVPAPAPYQQQP--PPPPP 137
Query: 803 PPXXXXPPXXXXXXP 759
PP PP P
Sbjct: 138 PPHYPPPPPHYPPPP 152
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.7 bits (61), Expect = 8.5
Identities = 19/70 (27%), Positives = 19/70 (27%), Gaps = 3/70 (4%)
Frame = -1
Query: 983 PDXPXXXXELXPXPXAXPPPXXXXXXXXCXXXXRXPPLXPHTXPXPXPXHXXAAX---PP 813
P P L P PPP PP P P P P PP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Query: 812 LPXPPXXXXP 783
P PP P
Sbjct: 786 PPPPPGMFAP 795
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.7 bits (61), Expect = 8.5
Identities = 19/70 (27%), Positives = 19/70 (27%), Gaps = 3/70 (4%)
Frame = -1
Query: 983 PDXPXXXXELXPXPXAXPPPXXXXXXXXCXXXXRXPPLXPHTXPXPXPXHXXAAX---PP 813
P P L P PPP PP P P P P PP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Query: 812 LPXPPXXXXP 783
P PP P
Sbjct: 786 PPPPPGMFAP 795
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.7 bits (61), Expect = 8.5
Identities = 19/70 (27%), Positives = 19/70 (27%), Gaps = 3/70 (4%)
Frame = -1
Query: 983 PDXPXXXXELXPXPXAXPPPXXXXXXXXCXXXXRXPPLXPHTXPXPXPXHXXAAX---PP 813
P P L P PPP PP P P P P PP
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 368
Query: 812 LPXPPXXXXP 783
P PP P
Sbjct: 369 PPPPPGMFAP 378
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.316 0.143 0.482
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,759,607
Number of Sequences: 27780
Number of extensions: 104322
Number of successful extensions: 441
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 338
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3245116438
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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