Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_P10
         (975 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8MQE6 Cluster: Wasp (Actin cytoskeleton modulator) hom...    34   4.8  
UniRef50_A1TE68 Cluster: Protein kinase; n=2; Mycobacterium|Rep:...    27   9.0  

>UniRef50_Q8MQE6 Cluster: Wasp (Actin cytoskeleton modulator)
           homolog protein 1, isoform b; n=3; Caenorhabditis|Rep:
           Wasp (Actin cytoskeleton modulator) homolog protein 1,
           isoform b - Caenorhabditis elegans
          Length = 781

 Score = 34.3 bits (75), Expect = 4.8
 Identities = 22/85 (25%), Positives = 24/85 (28%)
 Frame = +1

Query: 601 PXCWGVFSIGPPPPLXNHSKKXXPXXXKRVAXXPPPXNYKKSQGXXXXXXXXXXXXXXXX 780
           P   G   I P  PL        P         PPP    +S G                
Sbjct: 578 PPSSGTRGIAPSRPLPQAPNYGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPP 637

Query: 781 XXXXXALTRXXPXPPXPPPPGXXGG 855
                A+    P PP PPPP   GG
Sbjct: 638 PMGLPAVGAGAPPPPPPPPPSGAGG 662


>UniRef50_A1TE68 Cluster: Protein kinase; n=2; Mycobacterium|Rep:
           Protein kinase - Mycobacterium vanbaalenii (strain DSM
           7251 / PYR-1)
          Length = 574

 Score = 27.1 bits (57), Expect(2) = 9.0
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +1

Query: 814 PXPPXPPPPGXXGG 855
           P PP PPPP   GG
Sbjct: 302 PPPPPPPPPSTPGG 315



 Score = 25.0 bits (52), Expect(2) = 9.0
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +1

Query: 796 ALTRXXPXPPXPPPP 840
           A T   P PP PPPP
Sbjct: 294 AATMMAPLPPPPPPP 308


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 490,454,198
Number of Sequences: 1657284
Number of extensions: 6564942
Number of successful extensions: 41538
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 17095
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33041
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 91040045921
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)