Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_P10
(975 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504... 23 0.49
03_05_0576 + 25765137-25766420 30 2.4
10_06_0039 - 9966744-9967535,9968241-9968482,9969021-9969223,996... 29 4.2
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 29 4.2
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 29 5.6
05_05_0334 + 24156532-24156565,24156681-24156782,24157145-241572... 29 5.6
07_03_0329 + 16840051-16840917,16840999-16841342,16841444-168415... 29 7.4
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 29 7.4
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 24 7.6
02_05_0686 - 30900748-30902167,30903442-30904742 26 7.9
>07_01_0674 +
5047503-5047646,5047808-5047901,5048743-5048828,
5049380-5049429,5049517-5049586,5049668-5049749,
5049867-5050267,5050414-5050941,5051823-5052044
Length = 558
Score = 23.4 bits (48), Expect(3) = 0.49
Identities = 10/26 (38%), Positives = 11/26 (42%)
Frame = +1
Query: 631 PPPPLXNHSKKXXPXXXKRVAXXPPP 708
PPPPL S+ P PPP
Sbjct: 208 PPPPLPASSEPVDPSAASLPPLPPPP 233
Score = 23.0 bits (47), Expect(3) = 0.49
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 814 PXPPXPPPP 840
P PP PPPP
Sbjct: 228 PLPPPPPPP 236
Score = 23.0 bits (47), Expect(3) = 0.49
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 820 PPXPPPPG 843
PP PPPPG
Sbjct: 252 PPPPPPPG 259
>03_05_0576 + 25765137-25766420
Length = 427
Score = 30.3 bits (65), Expect = 2.4
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 813 PXPXPSPPXRXXRGXPXPKTPPP 881
P P PSPP + P P +PPP
Sbjct: 73 PSPSPSPPPQPSSPPPPPPSPPP 95
>10_06_0039 -
9966744-9967535,9968241-9968482,9969021-9969223,
9969333-9970645
Length = 849
Score = 29.5 bits (63), Expect = 4.2
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 813 PXPXPSPPXRXXRGXPXPKTPPP 881
P P P PP R P P PPP
Sbjct: 331 PPPPPPPPSRFNNTTPKPPPPPP 353
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 29.5 bits (63), Expect = 4.2
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 813 PXPXPSPPXRXXRGXPXPKTPPP 881
P P P PP R P P PPP
Sbjct: 603 PPPPPPPPILPNRSVPPPPPPPP 625
Score = 28.3 bits (60), Expect = 9.8
Identities = 15/52 (28%), Positives = 15/52 (28%)
Frame = +3
Query: 813 PXPXPSPPXRXXRGXPXPKTPPPXRXXXXXXXXXXXXXXXGXXFTQXPPLXP 968
P P P PP P P PPP G F PP P
Sbjct: 619 PPPPPPPPLPNHSVLPPPPPPPPPPSLPNRLVPPPPAPGIGNKFPAPPPPPP 670
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 29.1 bits (62), Expect = 5.6
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +3
Query: 813 PXPXPSPPXRXXRGXPXPKTPPPXR 887
P P PSPP P P T PP R
Sbjct: 110 PPPPPSPPPSAPPPPPPPPTQPPPR 134
>05_05_0334 + 24156532-24156565,24156681-24156782,24157145-24157274,
24157361-24157445,24157525-24157666,24157762-24157894,
24157993-24158254,24158331-24158519,24158596-24158721,
24158809-24159195,24159288-24159398,24159629-24160423,
24161114-24161255,24161350-24162518,24162609-24162818,
24163010-24163478,24164037-24164464
Length = 1637
Score = 29.1 bits (62), Expect = 5.6
Identities = 19/56 (33%), Positives = 20/56 (35%), Gaps = 1/56 (1%)
Frame = -1
Query: 969 GVXGGGXG*XXXRXWGGGGPXTPXXGXT-*XAGGFWXKGXPXXPGXGGXGXXXXXP 805
G GGG G W GGG G + GG W G P GG G P
Sbjct: 1547 GSGGGGWGTGGGSSWAGGGDGGSGGGDSNRGGGGGW--GTPAGGSDGGGGGWGAAP 1600
>07_03_0329 +
16840051-16840917,16840999-16841342,16841444-16841574,
16841671-16841792,16841877-16841983,16842104-16842236,
16842342-16842458,16842560-16842667,16842716-16842742,
16842759-16842830,16843462-16843584,16843671-16843833,
16844140-16844264,16844355-16844489,16844574-16844677,
16844772-16844834,16844930-16844993,16845186-16845318,
16845414-16845487,16845603-16845697,16845799-16845830,
16846201-16846355
Length = 1097
Score = 28.7 bits (61), Expect = 7.4
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -2
Query: 875 GGFGXRXPPXXPGGGGXGGXG 813
GG G PP GGGG GG G
Sbjct: 61 GGGGGGGPPYYGGGGGGGGGG 81
>01_01_0446 +
3321832-3322232,3322398-3322455,3322810-3323748,
3324504-3324654,3324740-3324818,3325826-3325934
Length = 578
Score = 28.7 bits (61), Expect = 7.4
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -2
Query: 875 GGFGXRXPPXXPGGGGXGGXG 813
GG G PP GGGG GG G
Sbjct: 389 GGGGPGAPPPYHGGGGGGGGG 409
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 23.8 bits (49), Expect(2) = 7.6
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 820 PPXPPPPGXXGG 855
PP PPPPG G
Sbjct: 1109 PPPPPPPGGITG 1120
Score = 23.0 bits (47), Expect(2) = 7.6
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 814 PXPPXPPPP 840
P PP PPPP
Sbjct: 1060 PSPPSPPPP 1068
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 26.2 bits (55), Expect(2) = 7.9
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +1
Query: 814 PXPPXPPPPGXXGG 855
P PP PPPPG G
Sbjct: 362 PSPPPPPPPGGKKG 375
Score = 20.6 bits (41), Expect(2) = 7.9
Identities = 7/15 (46%), Positives = 8/15 (53%)
Frame = +1
Query: 796 ALTRXXPXPPXPPPP 840
A+ P PP PP P
Sbjct: 307 AVASPAPPPPPPPKP 321
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,473,304
Number of Sequences: 37544
Number of extensions: 273815
Number of successful extensions: 3269
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1401
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2685
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2834967080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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