Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_P08
(857 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 136 2e-32
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 136 2e-32
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 136 2e-32
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 136 2e-32
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 136 2e-32
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 80 2e-15
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 80 2e-15
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 75 5e-14
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 59 5e-09
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 59 5e-09
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 58 1e-08
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 58 1e-08
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 58 1e-08
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 42 6e-04
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 39 0.004
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 38 0.009
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 34 0.11
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 33 0.20
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 33 0.20
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 33 0.26
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 33 0.34
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 33 0.34
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 31 1.1
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 31 1.1
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 29 3.2
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 29 3.2
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 29 3.2
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical pr... 28 7.4
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 136 bits (329), Expect = 2e-32
Identities = 62/64 (96%), Positives = 62/64 (96%)
Frame = +2
Query: 104 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 283
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 284 DKTK 295
DK K
Sbjct: 61 DKLK 64
Score = 115 bits (276), Expect = 5e-26
Identities = 52/56 (92%), Positives = 55/56 (98%)
Frame = +3
Query: 288 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIXNMITGTSQADCAVLIVA 455
KLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFI NMITGTSQADCAVL+VA
Sbjct: 62 KLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
Score = 46.4 bits (105), Expect = 3e-05
Identities = 21/22 (95%), Positives = 21/22 (95%)
Frame = +1
Query: 460 GTGEFEAGISKNXQTREHALLA 525
GTGEFEAGISKN QTREHALLA
Sbjct: 119 GTGEFEAGISKNGQTREHALLA 140
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 136 bits (329), Expect = 2e-32
Identities = 62/64 (96%), Positives = 62/64 (96%)
Frame = +2
Query: 104 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 283
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 284 DKTK 295
DK K
Sbjct: 61 DKLK 64
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 136 bits (329), Expect = 2e-32
Identities = 62/64 (96%), Positives = 62/64 (96%)
Frame = +2
Query: 104 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 283
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 284 DKTK 295
DK K
Sbjct: 61 DKLK 64
Score = 115 bits (276), Expect = 5e-26
Identities = 52/56 (92%), Positives = 55/56 (98%)
Frame = +3
Query: 288 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIXNMITGTSQADCAVLIVA 455
KLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFI NMITGTSQADCAVL+VA
Sbjct: 62 KLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 136 bits (329), Expect = 2e-32
Identities = 62/64 (96%), Positives = 62/64 (96%)
Frame = +2
Query: 104 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 283
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 284 DKTK 295
DK K
Sbjct: 61 DKLK 64
Score = 115 bits (276), Expect = 5e-26
Identities = 52/56 (92%), Positives = 55/56 (98%)
Frame = +3
Query: 288 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIXNMITGTSQADCAVLIVA 455
KLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFI NMITGTSQADCAVL+VA
Sbjct: 62 KLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
Score = 65.3 bits (152), Expect = 5e-11
Identities = 35/43 (81%), Positives = 35/43 (81%)
Frame = +1
Query: 460 GTGEFEAGISKNXQTREHALLAFHPPVSKQLIVGVNKMDSTEP 588
GTGEFEAGISKN QTREHALLA V KQLIV NKMDSTEP
Sbjct: 119 GTGEFEAGISKNGQTREHALLAQTLGV-KQLIVACNKMDSTEP 160
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 136 bits (329), Expect = 2e-32
Identities = 62/64 (96%), Positives = 62/64 (96%)
Frame = +2
Query: 104 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 283
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 284 DKTK 295
DK K
Sbjct: 61 DKLK 64
Score = 115 bits (276), Expect = 5e-26
Identities = 52/56 (92%), Positives = 55/56 (98%)
Frame = +3
Query: 288 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIXNMITGTSQADCAVLIVA 455
KLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFI NMITGTSQADCAVL+VA
Sbjct: 62 KLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
Score = 65.3 bits (152), Expect = 5e-11
Identities = 35/43 (81%), Positives = 35/43 (81%)
Frame = +1
Query: 460 GTGEFEAGISKNXQTREHALLAFHPPVSKQLIVGVNKMDSTEP 588
GTGEFEAGISKN QTREHALLA V KQLIV NKMDSTEP
Sbjct: 119 GTGEFEAGISKNGQTREHALLAQTLGV-KQLIVACNKMDSTEP 160
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 79.8 bits (188), Expect = 2e-15
Identities = 34/61 (55%), Positives = 46/61 (75%)
Frame = +2
Query: 113 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKT 292
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+T
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226
Query: 293 K 295
+
Sbjct: 227 E 227
Score = 76.2 bits (179), Expect = 3e-14
Identities = 33/51 (64%), Positives = 41/51 (80%)
Frame = +3
Query: 300 ERERGITIDIALWKFETSKYYVTIIDAPGHRDFIXNMITGTSQADCAVLIV 452
ERERG+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V
Sbjct: 229 ERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVV 279
Score = 43.6 bits (98), Expect = 2e-04
Identities = 23/43 (53%), Positives = 28/43 (65%)
Frame = +1
Query: 457 AGTGEFEAGISKNXQTREHALLAFHPPVSKQLIVGVNKMDSTE 585
A TGEFE G QT+EHALL V+ QLIV VNK+D+ +
Sbjct: 281 ATTGEFETGFENGGQTKEHALLLRSLGVT-QLIVAVNKLDTVD 322
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 79.8 bits (188), Expect = 2e-15
Identities = 34/61 (55%), Positives = 46/61 (75%)
Frame = +2
Query: 113 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKT 292
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+T
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244
Query: 293 K 295
+
Sbjct: 245 E 245
Score = 76.2 bits (179), Expect = 3e-14
Identities = 33/51 (64%), Positives = 41/51 (80%)
Frame = +3
Query: 300 ERERGITIDIALWKFETSKYYVTIIDAPGHRDFIXNMITGTSQADCAVLIV 452
ERERG+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V
Sbjct: 247 ERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVV 297
Score = 43.6 bits (98), Expect = 2e-04
Identities = 23/43 (53%), Positives = 28/43 (65%)
Frame = +1
Query: 457 AGTGEFEAGISKNXQTREHALLAFHPPVSKQLIVGVNKMDSTE 585
A TGEFE G QT+EHALL V+ QLIV VNK+D+ +
Sbjct: 299 ATTGEFETGFENGGQTKEHALLLRSLGVT-QLIVAVNKLDTVD 340
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 75.4 bits (177), Expect = 5e-14
Identities = 31/60 (51%), Positives = 45/60 (75%)
Frame = +2
Query: 107 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 286
G K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163
Score = 67.7 bits (158), Expect = 1e-11
Identities = 28/54 (51%), Positives = 40/54 (74%)
Frame = +3
Query: 300 ERERGITIDIALWKFETSKYYVTIIDAPGHRDFIXNMITGTSQADCAVLIVAGR 461
ERE+G T+++ FET K + TI+DAPGH+ F+ NMI G +QAD AVL+++ R
Sbjct: 168 EREKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISAR 221
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/40 (50%), Positives = 25/40 (62%)
Frame = +1
Query: 457 AGTGEFEAGISKNXQTREHALLAFHPPVSKQLIVGVNKMD 576
A GEFE G + QTREH++L V K L++ VNKMD
Sbjct: 220 ARRGEFETGFDRGGQTREHSMLVKTAGV-KHLVILVNKMD 258
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 58.8 bits (136), Expect = 5e-09
Identities = 29/56 (51%), Positives = 38/56 (67%)
Frame = +3
Query: 288 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIXNMITGTSQADCAVLIVA 455
K K E++RGITI++A +E+ + D PGH DFI NMI GTSQ D AVL++A
Sbjct: 85 KGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIA 140
Score = 28.7 bits (61), Expect = 5.6
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +2
Query: 116 KTHINIVVIGHVDSGKSTTT 175
K ++N+ IGH+D GK+T T
Sbjct: 43 KINVNVGTIGHIDHGKTTLT 62
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 58.8 bits (136), Expect = 5e-09
Identities = 29/56 (51%), Positives = 38/56 (67%)
Frame = +3
Query: 288 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIXNMITGTSQADCAVLIVA 455
K K E++RGITI++A +E+ + D PGH DFI NMI GTSQ D AVL++A
Sbjct: 85 KGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIA 140
Score = 28.7 bits (61), Expect = 5.6
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +2
Query: 116 KTHINIVVIGHVDSGKSTTT 175
K ++N+ IGH+D GK+T T
Sbjct: 43 KINVNVGTIGHIDHGKTTLT 62
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 57.6 bits (133), Expect = 1e-08
Identities = 26/52 (50%), Positives = 37/52 (71%)
Frame = +3
Query: 300 ERERGITIDIALWKFETSKYYVTIIDAPGHRDFIXNMITGTSQADCAVLIVA 455
E+ RGITI+ ++ET+K + ID PGH D+I NMITG +Q + A+L+VA
Sbjct: 93 EKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVA 144
Score = 35.1 bits (77), Expect = 0.065
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +2
Query: 110 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKG 259
++K H+N+ IGHVD GK+T T ++ G R E + +E +G
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARG 97
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 57.6 bits (133), Expect = 1e-08
Identities = 26/52 (50%), Positives = 37/52 (71%)
Frame = +3
Query: 300 ERERGITIDIALWKFETSKYYVTIIDAPGHRDFIXNMITGTSQADCAVLIVA 455
E+ RGITI+ ++ET+K + ID PGH D+I NMITG +Q + A+L+VA
Sbjct: 94 EKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVA 145
Score = 35.1 bits (77), Expect = 0.065
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +2
Query: 110 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKG 259
++K H+N+ IGHVD GK+T T ++ G R E + +E +G
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARG 98
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 57.6 bits (133), Expect = 1e-08
Identities = 26/52 (50%), Positives = 37/52 (71%)
Frame = +3
Query: 300 ERERGITIDIALWKFETSKYYVTIIDAPGHRDFIXNMITGTSQADCAVLIVA 455
E+ RGITI+ ++ET+K + ID PGH D+I NMITG +Q + A+L+VA
Sbjct: 94 EKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVA 145
Score = 35.1 bits (77), Expect = 0.065
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +2
Query: 110 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKG 259
++K H+N+ IGHVD GK+T T ++ G R E + +E +G
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARG 98
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 41.9 bits (94), Expect = 6e-04
Identities = 21/56 (37%), Positives = 29/56 (51%)
Frame = +3
Query: 288 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIXNMITGTSQADCAVLIVA 455
KL+ ERERGIT+ Y + +ID PGH DF + + D +L+VA
Sbjct: 79 KLQVERERGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVA 134
Score = 32.3 bits (70), Expect = 0.45
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +2
Query: 128 NIVVIGHVDSGKSTTTGHLIYKCGGI---DKRTIEKFEKEAQ 244
N ++ HVD GKST L+ CG + K+ ++K + E +
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPGQKQMLDKLQVERE 85
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 39.1 bits (87), Expect = 0.004
Identities = 21/53 (39%), Positives = 27/53 (50%)
Frame = +3
Query: 300 ERERGITIDIALWKFETSKYYVTIIDAPGHRDFIXNMITGTSQADCAVLIVAG 458
ER+RGITI A + + IID PGH DF + D AVL++ G
Sbjct: 93 ERQRGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVLCG 145
Score = 33.1 bits (72), Expect = 0.26
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2
Query: 128 NIVVIGHVDSGKSTTTGHLIYKCGGID 208
NI + H+DSGK+T T ++Y G ID
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRID 72
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 37.9 bits (84), Expect = 0.009
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = +3
Query: 291 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIXNMITGTSQADCAVLIVAG 458
L ERERGIT+ A + + + +ID PGH DF + D V+++ G
Sbjct: 68 LDIERERGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDG 123
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +2
Query: 128 NIVVIGHVDSGKSTTTGHLIYKCGGI 205
NI VI HVD+GK+T T L+Y G I
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAI 52
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +3
Query: 312 GITIDIALWKFETSK-YYVTIIDAPGHRDFIXNMITGTSQADCAVLIVA 455
GIT I + E +K VT +D PGH F G AD VL+VA
Sbjct: 188 GITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKGADIVVLVVA 236
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 33.5 bits (73), Expect = 0.20
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = +3
Query: 273 LGYWTKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIXNMITGTSQADCAVLIV 452
L Y + E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 55 LRYMDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 33.5 bits (73), Expect = 0.20
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = +3
Query: 273 LGYWTKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIXNMITGTSQADCAVLIV 452
L Y + E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 55 LRYMDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 33.1 bits (72), Expect = 0.26
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 360 YVTIIDAPGHRDFIXNMITGTSQADCAVLIVAG 458
+V+ +D PGH + M+ G + D A L+VAG
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVAG 160
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 32.7 bits (71), Expect = 0.34
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +2
Query: 104 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 199
M +++ N+ VI HVD GKST T L+ K G
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 44
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/45 (26%), Positives = 25/45 (55%)
Frame = +3
Query: 318 TIDIALWKFETSKYYVTIIDAPGHRDFIXNMITGTSQADCAVLIV 452
T+++ K + + + + +ID+PGH DF + D A+++V
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVVV 141
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 32.7 bits (71), Expect = 0.34
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +2
Query: 104 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 199
M +++ N+ VI HVD GKST T L+ K G
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 44
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/45 (26%), Positives = 25/45 (55%)
Frame = +3
Query: 318 TIDIALWKFETSKYYVTIIDAPGHRDFIXNMITGTSQADCAVLIV 452
T+++ K + + + + +ID+PGH DF + D A+++V
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALVVV 141
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +2
Query: 80 FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 190
++IRD P K+ + V+G+VD+GKST G L +
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +2
Query: 80 FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 190
++IRD P K+ + V+G+VD+GKST G L +
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 5/56 (8%)
Frame = +3
Query: 300 ERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIXNMITGTSQADCAVLIV 452
E++RG +I I + Y + IID PGH +F M AD V++V
Sbjct: 177 EKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMV 232
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 5/56 (8%)
Frame = +3
Query: 300 ERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIXNMITGTSQADCAVLIV 452
E++RG +I I + Y + IID PGH +F M AD V++V
Sbjct: 52 EKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMV 107
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 369 IIDAPGHRDFIXNMITGTSQADCAVLIV 452
IID PGH F G+S D A+L+V
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV 580
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 28.7 bits (61), Expect = 5.6
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +2
Query: 125 INIVVIGHVDSGKSTTT 175
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 5.6
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +2
Query: 125 INIVVIGHVDSGKSTTT 175
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical
protein C46C2.1b protein.
Length = 1677
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +2
Query: 203 IDKRTIEKFEKEAQEMGKGSFKYAW-VLDKTKG*A*AW 313
IDK +F K +E+G+GSFK + LD G A AW
Sbjct: 323 IDKSKNGRFLKFDEELGRGSFKTVFRGLDTETGVAVAW 360
>Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical
protein C46C2.1a protein.
Length = 1838
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +2
Query: 203 IDKRTIEKFEKEAQEMGKGSFKYAW-VLDKTKG*A*AW 313
IDK +F K +E+G+GSFK + LD G A AW
Sbjct: 323 IDKSKNGRFLKFDEELGRGSFKTVFRGLDTETGVAVAW 360
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,197,631
Number of Sequences: 27780
Number of extensions: 377861
Number of successful extensions: 864
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 805
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 860
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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