Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_P07
(937 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z95116-3|CAI17988.1| 423|Homo sapiens protein ( Human DNA seque... 38 0.069
CR456407-1|CAG30293.1| 443|Homo sapiens bK984G1.1 protein. 38 0.069
BC046358-1|AAH46358.1| 443|Homo sapiens EMI domain containing 1... 38 0.069
AL031186-3|CAI18002.1| 423|Homo sapiens protein ( Human DNA seq... 38 0.069
AJ416090-1|CAC94777.1| 441|Homo sapiens putative emu1 protein p... 38 0.069
X98705-1|CAA67261.1| 1069|Homo sapiens collagen type I alpha 1 p... 34 0.85
X80031-1|CAA56335.1| 1670|Homo sapiens type IV collagen alpha 3 ... 34 0.85
BC036531-1|AAH36531.1| 1464|Homo sapiens collagen, type I, alpha... 34 0.85
AJ288487-1|CAC36101.1| 1670|Homo sapiens alpha3 type IV collagen... 34 0.85
AF017178-1|AAB94054.2| 1461|Homo sapiens pro alpha 1(I) collagen... 34 0.85
AC097662-1|AAY24251.1| 1084|Homo sapiens unknown protein. 34 0.85
AB209597-1|BAD92834.1| 1467|Homo sapiens Collagen alpha 1 chain ... 34 0.85
Z74615-1|CAA98968.1| 1464|Homo sapiens prepro-alpha1(I) collagen... 33 1.1
Y15919-1|CAA75879.1| 122|Homo sapiens COL1A1 and PDGFB fusion t... 33 1.1
U05040-1|AAA17976.2| 644|Homo sapiens FUSE binding protein prot... 33 1.1
K01228-1|AAA51995.1| 1040|Homo sapiens COL1A1 protein. 33 1.1
BC017247-1|AAH17247.1| 653|Homo sapiens FUBP1 protein protein. 33 1.1
AL713657-1|CAD28466.1| 417|Homo sapiens hypothetical protein pr... 33 1.1
AB209366-1|BAD92603.1| 493|Homo sapiens far upstream element-bi... 33 1.1
Y15913-1|CAA75873.1| 86|Homo sapiens COL1A1 and PDGFB fusion t... 33 2.0
BC060789-1|AAH60789.1| 742|Homo sapiens collectin sub-family me... 33 2.0
AB052103-1|BAB39148.1| 622|Homo sapiens scavenger receptor with... 33 2.0
AB038518-1|BAB39147.1| 742|Homo sapiens scavenger receptor with... 33 2.0
AB034251-1|BAD83592.1| 742|Homo sapiens nurse cell scavenger re... 33 2.0
AB005145-1|BAB72147.1| 742|Homo sapiens collectin placenta 1 pr... 33 2.0
M76729-1|AAA59993.1| 1838|Homo sapiens pro-alpha-1 type V collag... 32 2.6
M60832-1|AAA62822.1| 635|Homo sapiens alpha-2 type VIII collage... 32 2.6
D90279-1|BAA14323.1| 1838|Homo sapiens collagen alpha 1(V) chain... 32 2.6
AL645768-1|CAI17261.1| 1838|Homo sapiens collagen type V alpha 1... 32 2.6
AL603650-2|CAI39859.1| 1838|Homo sapiens collagen type V alpha 1... 32 2.6
AL591890-1|CAI15483.1| 1838|Homo sapiens collagen type V alpha 1... 32 2.6
AB209864-1|BAD93101.1| 1792|Homo sapiens Pro-alpha-1 type V coll... 32 2.6
AB015427-1|BAA90526.1| 722|Homo sapiens zinc finger protein 219... 32 2.6
Y17397-1|CAA76763.1| 1690|Homo sapiens collagen alpha 4 type IV ... 32 3.4
X81053-1|CAA56943.1| 1690|Homo sapiens type IV collagen alpha 4 ... 32 3.4
U32169-3|AAC50215.1| 1629|Homo sapiens Pro-a2(XI) protein. 32 3.4
U32169-2|AAC50213.1| 1650|Homo sapiens Pro-a2(XI) protein. 32 3.4
U32169-1|AAC50214.1| 1736|Homo sapiens Pro-a2(XI) protein. 32 3.4
L18987-1|AAA35498.1| 663|Homo sapiens alpha-2 type XI collagen ... 32 3.4
BX248309-1|CAM26005.1| 1622|Homo sapiens collagen, type XI, alph... 32 3.4
BC099645-1|AAH99645.1| 657|Homo sapiens COL8A2 protein protein. 32 3.4
BC096297-1|AAH96297.1| 657|Homo sapiens COL8A2 protein protein. 32 3.4
AL845446-3|CAI95551.1| 1650|Homo sapiens collagen, type XI, alph... 32 3.4
AL844527-6|CAI41834.1| 1650|Homo sapiens collagen, type XI, alph... 32 3.4
AL662824-16|CAI17611.2| 1650|Homo sapiens collagen, type XI, alp... 32 3.4
AL645940-2|CAI18063.2| 1650|Homo sapiens collagen type XI alpha ... 32 3.4
AL138787-1|CAI22267.1| 703|Homo sapiens collagen type VIII alph... 32 3.4
AL031228-16|CAA20240.1| 1736|Homo sapiens collagen type XI alpha... 32 3.4
AL031228-15|CAI95623.1| 1650|Homo sapiens collagen type XI alpha... 32 3.4
AK074129-1|BAB84955.1| 705|Homo sapiens FLJ00201 protein protein. 32 3.4
AC079235-1|AAY14670.1| 1324|Homo sapiens unknown protein. 32 3.4
M30838-1|AAA36510.1| 248|Homo sapiens protein ( Human pulmonary... 31 4.6
D17391-1|BAA04214.1| 472|Homo sapiens alpha 4(IV) collagen prot... 31 4.6
X16711-1|CAA34683.1| 1160|Homo sapiens COL2A1 protein. 31 6.0
X13783-1|CAA32030.1| 714|Homo sapiens alpha-1 type 2 collagen (... 31 6.0
M95610-1|AAA80977.1| 675|Homo sapiens alpha-2 IX collagen protein. 31 6.0
L10347-1|AAC41772.1| 1487|Homo sapiens alpha-1 type II collagen ... 31 6.0
K03475-1|AAA36520.1| 248|Homo sapiens protein ( Human pulmonary... 31 6.0
J04177-1|AAA51891.1| 1806|Homo sapiens COL11A1 protein. 31 6.0
BC117697-1|AAI17698.1| 1690|Homo sapiens COL11A1 protein protein. 31 6.0
BC116449-1|AAI16450.1| 1487|Homo sapiens collagen, type II, alph... 31 6.0
AL627203-1|CAH73908.1| 1806|Homo sapiens collagen type XI alpha ... 31 6.0
AL050341-6|CAB81611.1| 689|Homo sapiens collagen type IX alpha ... 31 6.0
AF101112-3|AAF04724.1| 1767|Homo sapiens collagen type XI alpha-... 31 6.0
AF101112-2|AAF04726.1| 1818|Homo sapiens collagen type XI alpha-... 31 6.0
AF101112-1|AAF04725.1| 1806|Homo sapiens collagen type XI alpha-... 31 6.0
AF019406-1|AAC33512.1| 689|Homo sapiens collagen type IX alpha ... 31 6.0
AB208844-1|BAD92081.1| 1017|Homo sapiens alpha 1 type XI collage... 31 6.0
AC107069-1|AAX93111.1| 538|Homo sapiens unknown protein. 31 8.0
>Z95116-3|CAI17988.1| 423|Homo sapiens protein ( Human DNA sequence
from clone CTA-57G9 on chromosome 22q12.1. ).
Length = 423
Score = 37.5 bits (83), Expect = 0.069
Identities = 20/51 (39%), Positives = 21/51 (41%)
Frame = +3
Query: 369 GNXPXXGPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXP 521
G+ GP G GPPG P P R G E G P P P PP P
Sbjct: 191 GDAGSRGPMGMRGPPGPQGPPGSPGRAGAVGTPGERGPPGPPGPPG-PPGP 240
>CR456407-1|CAG30293.1| 443|Homo sapiens bK984G1.1 protein.
Length = 443
Score = 37.5 bits (83), Expect = 0.069
Identities = 20/51 (39%), Positives = 21/51 (41%)
Frame = +3
Query: 369 GNXPXXGPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXP 521
G+ GP G GPPG P P R G E G P P P PP P
Sbjct: 211 GDAGSRGPMGMRGPPGPQGPPGSPGRAGAVGTPGERGPPGPPGPPG-PPGP 260
>BC046358-1|AAH46358.1| 443|Homo sapiens EMI domain containing 1
protein.
Length = 443
Score = 37.5 bits (83), Expect = 0.069
Identities = 20/51 (39%), Positives = 21/51 (41%)
Frame = +3
Query: 369 GNXPXXGPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXP 521
G+ GP G GPPG P P R G E G P P P PP P
Sbjct: 211 GDAGSRGPMGMRGPPGPQGPPGSPGRAGAVGTPGERGPPGPPGPPG-PPGP 260
>AL031186-3|CAI18002.1| 423|Homo sapiens protein ( Human DNA
sequence from clone CTA-984G1 on chromosome
22q12.1-12.2. ).
Length = 423
Score = 37.5 bits (83), Expect = 0.069
Identities = 20/51 (39%), Positives = 21/51 (41%)
Frame = +3
Query: 369 GNXPXXGPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXP 521
G+ GP G GPPG P P R G E G P P P PP P
Sbjct: 191 GDAGSRGPMGMRGPPGPQGPPGSPGRAGAVGTPGERGPPGPPGPPG-PPGP 240
>AJ416090-1|CAC94777.1| 441|Homo sapiens putative emu1 protein
protein.
Length = 441
Score = 37.5 bits (83), Expect = 0.069
Identities = 20/51 (39%), Positives = 21/51 (41%)
Frame = +3
Query: 369 GNXPXXGPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXP 521
G+ GP G GPPG P P R G E G P P P PP P
Sbjct: 209 GDAGSRGPMGMRGPPGPQGPPGSPGRAGAVGTPGERGPPGPPGPPG-PPGP 258
>X98705-1|CAA67261.1| 1069|Homo sapiens collagen type I alpha 1
protein.
Length = 1069
Score = 33.9 bits (74), Expect = 0.85
Identities = 20/60 (33%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXN-PGXEHAP 563
G G G PGL P P + G + A E G P P P P + PG E +P
Sbjct: 965 GQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPGAEGSP 1024
Score = 33.5 bits (73), Expect = 1.1
Identities = 23/64 (35%), Positives = 25/64 (39%)
Frame = +3
Query: 369 GNXPXXGPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPG 548
G GP G GPPG G A A +AG P P P PP P V PG
Sbjct: 803 GEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGP-AGPAGPPGPI-GNVGAPG 860
Query: 549 XEHA 560
+ A
Sbjct: 861 AKGA 864
>X80031-1|CAA56335.1| 1670|Homo sapiens type IV collagen alpha 3
chain protein.
Length = 1670
Score = 33.9 bits (74), Expect = 0.85
Identities = 17/49 (34%), Positives = 19/49 (38%)
Frame = +3
Query: 366 SGNXPXXGPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYP 512
S + P GP G GPPG P P G + G P P P P
Sbjct: 649 SVSTPVPGPPGPPGPPGHPGPQGPPGIPGSLGKCGDPGLPGPDGEPGIP 697
Score = 30.7 bits (66), Expect = 8.0
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXP 521
GP G G PGL P R G A G P P +P P
Sbjct: 484 GPPGLPGLPGLHGVKGIPGRQGAAGLKGSPGSPGNTGLPGFPGFP 528
>BC036531-1|AAH36531.1| 1464|Homo sapiens collagen, type I, alpha 1
protein.
Length = 1464
Score = 33.9 bits (74), Expect = 0.85
Identities = 20/60 (33%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXN-PGXEHAP 563
G G G PGL P P + G + A E G P P P P + PG E +P
Sbjct: 965 GQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPGAEGSP 1024
Score = 33.5 bits (73), Expect = 1.1
Identities = 23/64 (35%), Positives = 25/64 (39%)
Frame = +3
Query: 369 GNXPXXGPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPG 548
G GP G GPPG G A A +AG P P P PP P V PG
Sbjct: 803 GEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGP-AGPAGPPGPI-GNVGAPG 860
Query: 549 XEHA 560
+ A
Sbjct: 861 AKGA 864
>AJ288487-1|CAC36101.1| 1670|Homo sapiens alpha3 type IV collagen
protein.
Length = 1670
Score = 33.9 bits (74), Expect = 0.85
Identities = 17/49 (34%), Positives = 19/49 (38%)
Frame = +3
Query: 366 SGNXPXXGPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYP 512
S + P GP G GPPG P P G + G P P P P
Sbjct: 649 SVSTPVPGPPGPPGPPGHPGPQGPPGIPGSLGKCGDPGLPGPDGEPGIP 697
Score = 30.7 bits (66), Expect = 8.0
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXP 521
GP G G PGL P R G A G P P +P P
Sbjct: 484 GPPGLPGLPGLHGVKGIPGRQGAAGLKGSPGSPGNTGLPGFPGFP 528
>AF017178-1|AAB94054.2| 1461|Homo sapiens pro alpha 1(I) collagen
protein.
Length = 1461
Score = 33.9 bits (74), Expect = 0.85
Identities = 20/60 (33%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXN-PGXEHAP 563
G G G PGL P P + G + A E G P P P P + PG E +P
Sbjct: 962 GQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPGAEGSP 1021
Score = 33.5 bits (73), Expect = 1.1
Identities = 23/64 (35%), Positives = 25/64 (39%)
Frame = +3
Query: 369 GNXPXXGPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPG 548
G GP G GPPG G A A +AG P P P PP P V PG
Sbjct: 800 GEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGP-AGPAGPPGPI-GNVGAPG 857
Query: 549 XEHA 560
+ A
Sbjct: 858 AKGA 861
>AC097662-1|AAY24251.1| 1084|Homo sapiens unknown protein.
Length = 1084
Score = 33.9 bits (74), Expect = 0.85
Identities = 17/49 (34%), Positives = 19/49 (38%)
Frame = +3
Query: 366 SGNXPXXGPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYP 512
S + P GP G GPPG P P G + G P P P P
Sbjct: 63 SVSTPVPGPPGPPGPPGHPGPQGPPGIPGSLGKCGDPGLPGPDGEPGIP 111
>AB209597-1|BAD92834.1| 1467|Homo sapiens Collagen alpha 1 chain
precursor variant protein.
Length = 1467
Score = 33.9 bits (74), Expect = 0.85
Identities = 20/60 (33%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXN-PGXEHAP 563
G G G PGL P P + G + A E G P P P P + PG E +P
Sbjct: 968 GQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPGAEGSP 1027
Score = 33.5 bits (73), Expect = 1.1
Identities = 23/64 (35%), Positives = 25/64 (39%)
Frame = +3
Query: 369 GNXPXXGPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPG 548
G GP G GPPG G A A +AG P P P PP P V PG
Sbjct: 806 GEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGP-AGPAGPPGPI-GNVGAPG 863
Query: 549 XEHA 560
+ A
Sbjct: 864 AKGA 867
>Z74615-1|CAA98968.1| 1464|Homo sapiens prepro-alpha1(I) collagen
protein.
Length = 1464
Score = 33.5 bits (73), Expect = 1.1
Identities = 23/64 (35%), Positives = 25/64 (39%)
Frame = +3
Query: 369 GNXPXXGPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPG 548
G GP G GPPG G A A +AG P P P PP P V PG
Sbjct: 803 GEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGP-AGPAGPPGPI-GNVGAPG 860
Query: 549 XEHA 560
+ A
Sbjct: 861 AKGA 864
Score = 31.5 bits (68), Expect = 4.6
Identities = 16/45 (35%), Positives = 18/45 (40%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXP 521
G G G PGL P P + G + A E G P P P P
Sbjct: 965 GQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPP 1009
>Y15919-1|CAA75879.1| 122|Homo sapiens COL1A1 and PDGFB fusion
transcript protein.
Length = 122
Score = 33.5 bits (73), Expect = 1.1
Identities = 23/64 (35%), Positives = 25/64 (39%)
Frame = +3
Query: 369 GNXPXXGPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPG 548
G GP G GPPG G A A +AG P P P PP P V PG
Sbjct: 16 GEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGP-AGPAGPPGPI-GNVGAPG 73
Query: 549 XEHA 560
+ A
Sbjct: 74 AKGA 77
>U05040-1|AAA17976.2| 644|Homo sapiens FUSE binding protein
protein.
Length = 644
Score = 33.5 bits (73), Expect = 1.1
Identities = 21/61 (34%), Positives = 22/61 (36%), Gaps = 1/61 (1%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXP-XPQXXPXYPPXPXKXXVXNPGXEHAP 563
GP GPP PH P HG P G P P Y P P P +AP
Sbjct: 449 GPVNPLGPPVPHGPHGVPGPHG-PPGPPGPGTPMGPYNPAPYNPGPPGPAPHGPPAPYAP 507
Query: 564 Q 566
Q
Sbjct: 508 Q 508
>K01228-1|AAA51995.1| 1040|Homo sapiens COL1A1 protein.
Length = 1040
Score = 33.5 bits (73), Expect = 1.1
Identities = 23/64 (35%), Positives = 25/64 (39%)
Frame = +3
Query: 369 GNXPXXGPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPG 548
G GP G GPPG G A A +AG P P P PP P V PG
Sbjct: 379 GEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGP-AGPAGPPGPI-GNVGAPG 436
Query: 549 XEHA 560
+ A
Sbjct: 437 AKGA 440
Score = 31.5 bits (68), Expect = 4.6
Identities = 16/45 (35%), Positives = 18/45 (40%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXP 521
G G G PGL P P + G + A E G P P P P
Sbjct: 541 GQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPP 585
>BC017247-1|AAH17247.1| 653|Homo sapiens FUBP1 protein protein.
Length = 653
Score = 33.5 bits (73), Expect = 1.1
Identities = 21/61 (34%), Positives = 22/61 (36%), Gaps = 1/61 (1%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXP-XPQXXPXYPPXPXKXXVXNPGXEHAP 563
GP GPP PH P HG P G P P Y P P P +AP
Sbjct: 448 GPVNPLGPPVPHGPHGVPGPHG-PPGPPGPGTPMGPYNPAPYNPGPPGPAPHGPPAPYAP 506
Query: 564 Q 566
Q
Sbjct: 507 Q 507
>AL713657-1|CAD28466.1| 417|Homo sapiens hypothetical protein
protein.
Length = 417
Score = 33.5 bits (73), Expect = 1.1
Identities = 19/65 (29%), Positives = 21/65 (32%)
Frame = +3
Query: 369 GNXPXXGPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPG 548
G+ GP G G GL P P G E G P P+ P P P P
Sbjct: 196 GSSGDPGPPGPPGKEGLPGPQGPPGFQGLQGTVGEPGVPGPRGLPGLPGVPGMPGPKGPP 255
Query: 549 XEHAP 563
P
Sbjct: 256 GPPGP 260
>AB209366-1|BAD92603.1| 493|Homo sapiens far upstream
element-binding protein variant protein.
Length = 493
Score = 33.5 bits (73), Expect = 1.1
Identities = 21/61 (34%), Positives = 22/61 (36%), Gaps = 1/61 (1%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXP-XPQXXPXYPPXPXKXXVXNPGXEHAP 563
GP GPP PH P HG P G P P Y P P P +AP
Sbjct: 299 GPVNPLGPPVPHGPHGVPGPHG-PPGPPGPGTPMGPYNPAPYNPGPPGPAPHGPPAPYAP 357
Query: 564 Q 566
Q
Sbjct: 358 Q 358
>Y15913-1|CAA75873.1| 86|Homo sapiens COL1A1 and PDGFB fusion
transcript protein.
Length = 86
Score = 32.7 bits (71), Expect = 2.0
Identities = 19/51 (37%), Positives = 20/51 (39%)
Frame = +3
Query: 369 GNXPXXGPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXP 521
G GP G GPPG G A A +AG P P P PP P
Sbjct: 16 GEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGP-AGPAGPPGP 65
>BC060789-1|AAH60789.1| 742|Homo sapiens collectin sub-family
member 12 protein.
Length = 742
Score = 32.7 bits (71), Expect = 2.0
Identities = 18/59 (30%), Positives = 19/59 (32%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPGXEHAP 563
GP G G GL P P G E G P P+ P P P P P
Sbjct: 527 GPPGPPGKEGLPGPQGPPGFQGLQGTVGEPGVPGPRGLPGLPGVPGMPGPKGPPGPPGP 585
>AB052103-1|BAB39148.1| 622|Homo sapiens scavenger receptor with
C-type lectin type II protein.
Length = 622
Score = 32.7 bits (71), Expect = 2.0
Identities = 18/59 (30%), Positives = 19/59 (32%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPGXEHAP 563
GP G G GL P P G E G P P+ P P P P P
Sbjct: 527 GPPGPPGKEGLPGPQGPPGFQGLQGTVGEPGVPGPRGLPGLPGVPGMPGPKGPPGPPGP 585
>AB038518-1|BAB39147.1| 742|Homo sapiens scavenger receptor with
C-type lectin type I protein.
Length = 742
Score = 32.7 bits (71), Expect = 2.0
Identities = 18/59 (30%), Positives = 19/59 (32%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPGXEHAP 563
GP G G GL P P G E G P P+ P P P P P
Sbjct: 527 GPPGPPGKEGLPGPQGPPGFQGLQGTVGEPGVPGPRGLPGLPGVPGMPGPKGPPGPPGP 585
>AB034251-1|BAD83592.1| 742|Homo sapiens nurse cell scavenger
receptor 2 protein.
Length = 742
Score = 32.7 bits (71), Expect = 2.0
Identities = 18/59 (30%), Positives = 19/59 (32%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPGXEHAP 563
GP G G GL P P G E G P P+ P P P P P
Sbjct: 527 GPPGPPGKEGLPGPQGPPGFQGLQGTVGEPGVPGPRGLPGLPGVPGMPGPKGPPGPPGP 585
>AB005145-1|BAB72147.1| 742|Homo sapiens collectin placenta 1
protein.
Length = 742
Score = 32.7 bits (71), Expect = 2.0
Identities = 18/59 (30%), Positives = 19/59 (32%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPGXEHAP 563
GP G G GL P P G E G P P+ P P P P P
Sbjct: 527 GPPGPPGKEGLPGPQGPPGFQGLQGTVGEPGVPGPRGLPGLPGVPGMPGPKGPPGPPGP 585
>M76729-1|AAA59993.1| 1838|Homo sapiens pro-alpha-1 type V collagen
protein.
Length = 1838
Score = 32.3 bits (70), Expect = 2.6
Identities = 18/59 (30%), Positives = 19/59 (32%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPGXEHAP 563
GP G GPPG+ P G E G P Q P P P E P
Sbjct: 688 GPPGPPGPPGVTGMDGQPGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGP 746
>M60832-1|AAA62822.1| 635|Homo sapiens alpha-2 type VIII collagen
protein.
Length = 635
Score = 32.3 bits (70), Expect = 2.6
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = +3
Query: 369 GNXPXXGPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXP 503
G+ GP G GPPGL P R G EAG P P
Sbjct: 281 GDPGEQGPQGLGGPPGLPGSAGLPGRRGPPGLRGEAGPGGPPGVP 325
Score = 31.5 bits (68), Expect = 4.6
Identities = 17/54 (31%), Positives = 19/54 (35%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPG 548
G G G PGL P P G A G P + P P P + PG
Sbjct: 383 GDLGLPGQPGLRGPSGIPGLQGPAGPIGPQGLPGLKGEPGLPGPPGEGRAGEPG 436
>D90279-1|BAA14323.1| 1838|Homo sapiens collagen alpha 1(V) chain
precursor protein.
Length = 1838
Score = 32.3 bits (70), Expect = 2.6
Identities = 18/59 (30%), Positives = 19/59 (32%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPGXEHAP 563
GP G GPPG+ P G E G P Q P P P E P
Sbjct: 688 GPPGPPGPPGVTGMDGQPGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGP 746
>AL645768-1|CAI17261.1| 1838|Homo sapiens collagen type V alpha 1
protein.
Length = 1838
Score = 32.3 bits (70), Expect = 2.6
Identities = 18/59 (30%), Positives = 19/59 (32%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPGXEHAP 563
GP G GPPG+ P G E G P Q P P P E P
Sbjct: 688 GPPGPPGPPGVTGMDGQPGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGP 746
>AL603650-2|CAI39859.1| 1838|Homo sapiens collagen type V alpha 1
protein.
Length = 1838
Score = 32.3 bits (70), Expect = 2.6
Identities = 18/59 (30%), Positives = 19/59 (32%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPGXEHAP 563
GP G GPPG+ P G E G P Q P P P E P
Sbjct: 688 GPPGPPGPPGVTGMDGQPGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGP 746
>AL591890-1|CAI15483.1| 1838|Homo sapiens collagen type V alpha 1
protein.
Length = 1838
Score = 32.3 bits (70), Expect = 2.6
Identities = 18/59 (30%), Positives = 19/59 (32%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPGXEHAP 563
GP G GPPG+ P G E G P Q P P P E P
Sbjct: 688 GPPGPPGPPGVTGMDGQPGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGP 746
>AB209864-1|BAD93101.1| 1792|Homo sapiens Pro-alpha-1 type V
collagen variant protein.
Length = 1792
Score = 32.3 bits (70), Expect = 2.6
Identities = 18/59 (30%), Positives = 19/59 (32%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPGXEHAP 563
GP G GPPG+ P G E G P Q P P P E P
Sbjct: 642 GPPGPPGPPGVTGMDGQPGPKGNVGPQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGP 700
>AB015427-1|BAA90526.1| 722|Homo sapiens zinc finger protein 219
protein.
Length = 722
Score = 32.3 bits (70), Expect = 2.6
Identities = 15/48 (31%), Positives = 17/48 (35%)
Frame = +3
Query: 459 PAXREAGXPXPQXXPXYPPXPXKXXVXNPGXEHAPQNRXAKTPGTXKP 602
P + P PQ P PP P V P E P+ TP P
Sbjct: 218 PLAATSAAPPPQPQPQPPPQPEPRSVPQPEPEPEPEREATPTPAPAAP 265
>Y17397-1|CAA76763.1| 1690|Homo sapiens collagen alpha 4 type IV
protein.
Length = 1690
Score = 31.9 bits (69), Expect = 3.4
Identities = 18/59 (30%), Positives = 21/59 (35%)
Frame = +3
Query: 369 GNXPXXGPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNP 545
G+ GP G GPPG H P G E G P P+ P P + P
Sbjct: 1115 GSPGRPGPPGSSGPPGCPGDHGMP---GLRGQPGEMGDPGPRGLQGDPGIPGPPGIKGP 1170
Score = 31.5 bits (68), Expect = 4.6
Identities = 18/65 (27%), Positives = 22/65 (33%)
Frame = +3
Query: 369 GNXPXXGPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPG 548
G+ GP G GPPG P G G P PQ +P P + + P
Sbjct: 1292 GDCGLPGPPGPPGPPGPPGYKGFPGCDGKDGQKGPMGFPGPQGPHGFPGPPGEKGLPGPP 1351
Query: 549 XEHAP 563
P
Sbjct: 1352 GRKGP 1356
>X81053-1|CAA56943.1| 1690|Homo sapiens type IV collagen alpha 4 chain
protein.
Length = 1690
Score = 31.9 bits (69), Expect = 3.4
Identities = 18/59 (30%), Positives = 21/59 (35%)
Frame = +3
Query: 369 GNXPXXGPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNP 545
G+ GP G GPPG H P G E G P P+ P P + P
Sbjct: 1115 GSPGRPGPPGSSGPPGCPGDHGMP---GLRGQPGEMGDPGPRGLQGDPGIPGPPGIKGP 1170
Score = 31.5 bits (68), Expect = 4.6
Identities = 18/65 (27%), Positives = 22/65 (33%)
Frame = +3
Query: 369 GNXPXXGPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPG 548
G+ GP G GPPG P G G P PQ +P P + + P
Sbjct: 1292 GDCGLPGPPGPPGPPGPPGYKGFPGCDGKDGQKGPMGFPGPQGPHGFPGPPGEKGLPGPP 1351
Query: 549 XEHAP 563
P
Sbjct: 1352 GRKGP 1356
>U32169-3|AAC50215.1| 1629|Homo sapiens Pro-a2(XI) protein.
Length = 1629
Score = 31.9 bits (69), Expect = 3.4
Identities = 21/74 (28%), Positives = 24/74 (32%), Gaps = 2/74 (2%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPGXEHAPQ 566
GP G GPPG+ G E G P Q P P P E PQ
Sbjct: 509 GPPGIPGPPGVRGMDGPQGPKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQ 568
Query: 567 NRXA--KTPGTXKP 602
+ PG+ P
Sbjct: 569 GKPGLPGMPGSDGP 582
>U32169-2|AAC50213.1| 1650|Homo sapiens Pro-a2(XI) protein.
Length = 1650
Score = 31.9 bits (69), Expect = 3.4
Identities = 21/74 (28%), Positives = 24/74 (32%), Gaps = 2/74 (2%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPGXEHAPQ 566
GP G GPPG+ G E G P Q P P P E PQ
Sbjct: 530 GPPGIPGPPGVRGMDGPQGPKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQ 589
Query: 567 NRXA--KTPGTXKP 602
+ PG+ P
Sbjct: 590 GKPGLPGMPGSDGP 603
>U32169-1|AAC50214.1| 1736|Homo sapiens Pro-a2(XI) protein.
Length = 1736
Score = 31.9 bits (69), Expect = 3.4
Identities = 21/74 (28%), Positives = 24/74 (32%), Gaps = 2/74 (2%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPGXEHAPQ 566
GP G GPPG+ G E G P Q P P P E PQ
Sbjct: 616 GPPGIPGPPGVRGMDGPQGPKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQ 675
Query: 567 NRXA--KTPGTXKP 602
+ PG+ P
Sbjct: 676 GKPGLPGMPGSDGP 689
>L18987-1|AAA35498.1| 663|Homo sapiens alpha-2 type XI collagen
protein.
Length = 663
Score = 31.9 bits (69), Expect = 3.4
Identities = 21/74 (28%), Positives = 24/74 (32%), Gaps = 2/74 (2%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPGXEHAPQ 566
GP G GPPG+ G E G P Q P P P E PQ
Sbjct: 472 GPPGIPGPPGVRGMDGPQGPKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQ 531
Query: 567 NRXA--KTPGTXKP 602
+ PG+ P
Sbjct: 532 GKPGLPGMPGSDGP 545
>BX248309-1|CAM26005.1| 1622|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 1622
Score = 31.9 bits (69), Expect = 3.4
Identities = 21/74 (28%), Positives = 24/74 (32%), Gaps = 2/74 (2%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPGXEHAPQ 566
GP G GPPG+ G E G P Q P P P E PQ
Sbjct: 502 GPPGIPGPPGVRGMDGPQGPKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQ 561
Query: 567 NRXA--KTPGTXKP 602
+ PG+ P
Sbjct: 562 GKPGLPGMPGSDGP 575
>BC099645-1|AAH99645.1| 657|Homo sapiens COL8A2 protein protein.
Length = 657
Score = 31.9 bits (69), Expect = 3.4
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +3
Query: 369 GNXPXXGPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXP 503
G GP G GPPGL P R G EAG P P
Sbjct: 300 GEPGEQGPQGLGGPPGLPGSAGLPGRRGPPGPKGEAGPGGPPGVP 344
Score = 31.5 bits (68), Expect = 4.6
Identities = 17/54 (31%), Positives = 19/54 (35%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPG 548
G G G PGL P P G A G P + P P P + PG
Sbjct: 402 GDLGLPGQPGLRGPSGIPGLQGPAGPIGPQGLPGLKGEPGLPGPPGEGRAGEPG 455
>BC096297-1|AAH96297.1| 657|Homo sapiens COL8A2 protein protein.
Length = 657
Score = 31.9 bits (69), Expect = 3.4
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +3
Query: 369 GNXPXXGPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXP 503
G GP G GPPGL P R G EAG P P
Sbjct: 300 GEPGEQGPQGLGGPPGLPGSAGLPGRRGPPGPKGEAGPGGPPGVP 344
Score = 31.5 bits (68), Expect = 4.6
Identities = 17/54 (31%), Positives = 19/54 (35%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPG 548
G G G PGL P P G A G P + P P P + PG
Sbjct: 402 GDLGLPGQPGLRGPSGIPGLQGPAGPIGPQGLPGLKGEPGLPGPPGEGRAGEPG 455
>AL845446-3|CAI95551.1| 1650|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 1650
Score = 31.9 bits (69), Expect = 3.4
Identities = 21/74 (28%), Positives = 24/74 (32%), Gaps = 2/74 (2%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPGXEHAPQ 566
GP G GPPG+ G E G P Q P P P E PQ
Sbjct: 530 GPPGIPGPPGVRGMDGPQGPKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQ 589
Query: 567 NRXA--KTPGTXKP 602
+ PG+ P
Sbjct: 590 GKPGLPGMPGSDGP 603
>AL844527-6|CAI41834.1| 1650|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 1650
Score = 31.9 bits (69), Expect = 3.4
Identities = 21/74 (28%), Positives = 24/74 (32%), Gaps = 2/74 (2%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPGXEHAPQ 566
GP G GPPG+ G E G P Q P P P E PQ
Sbjct: 530 GPPGIPGPPGVRGMDGPQGPKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQ 589
Query: 567 NRXA--KTPGTXKP 602
+ PG+ P
Sbjct: 590 GKPGLPGMPGSDGP 603
>AL662824-16|CAI17611.2| 1650|Homo sapiens collagen, type XI, alpha
2 protein.
Length = 1650
Score = 31.9 bits (69), Expect = 3.4
Identities = 21/74 (28%), Positives = 24/74 (32%), Gaps = 2/74 (2%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPGXEHAPQ 566
GP G GPPG+ G E G P Q P P P E PQ
Sbjct: 530 GPPGIPGPPGVRGMDGPQGPKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQ 589
Query: 567 NRXA--KTPGTXKP 602
+ PG+ P
Sbjct: 590 GKPGLPGMPGSDGP 603
>AL645940-2|CAI18063.2| 1650|Homo sapiens collagen type XI alpha 2
protein.
Length = 1650
Score = 31.9 bits (69), Expect = 3.4
Identities = 21/74 (28%), Positives = 24/74 (32%), Gaps = 2/74 (2%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPGXEHAPQ 566
GP G GPPG+ G E G P Q P P P E PQ
Sbjct: 530 GPPGIPGPPGVRGMDGPQGPKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQ 589
Query: 567 NRXA--KTPGTXKP 602
+ PG+ P
Sbjct: 590 GKPGLPGMPGSDGP 603
>AL138787-1|CAI22267.1| 703|Homo sapiens collagen type VIII alpha 2
protein.
Length = 703
Score = 31.9 bits (69), Expect = 3.4
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +3
Query: 369 GNXPXXGPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXP 503
G GP G GPPGL P R G EAG P P
Sbjct: 346 GEPGEQGPQGLGGPPGLPGSAGLPGRRGPPGPKGEAGPGGPPGVP 390
Score = 31.5 bits (68), Expect = 4.6
Identities = 17/54 (31%), Positives = 19/54 (35%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPG 548
G G G PGL P P G A G P + P P P + PG
Sbjct: 448 GDLGLPGQPGLRGPSGIPGLQGPAGPIGPQGLPGLKGEPGLPGPPGEGRAGEPG 501
>AL031228-16|CAA20240.1| 1736|Homo sapiens collagen type XI alpha 2
protein.
Length = 1736
Score = 31.9 bits (69), Expect = 3.4
Identities = 21/74 (28%), Positives = 24/74 (32%), Gaps = 2/74 (2%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPGXEHAPQ 566
GP G GPPG+ G E G P Q P P P E PQ
Sbjct: 616 GPPGIPGPPGVRGMDGPQGPKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQ 675
Query: 567 NRXA--KTPGTXKP 602
+ PG+ P
Sbjct: 676 GKPGLPGMPGSDGP 689
>AL031228-15|CAI95623.1| 1650|Homo sapiens collagen type XI alpha 2
protein.
Length = 1650
Score = 31.9 bits (69), Expect = 3.4
Identities = 21/74 (28%), Positives = 24/74 (32%), Gaps = 2/74 (2%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPGXEHAPQ 566
GP G GPPG+ G E G P Q P P P E PQ
Sbjct: 530 GPPGIPGPPGVRGMDGPQGPKGSLGPQGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQ 589
Query: 567 NRXA--KTPGTXKP 602
+ PG+ P
Sbjct: 590 GKPGLPGMPGSDGP 603
>AK074129-1|BAB84955.1| 705|Homo sapiens FLJ00201 protein protein.
Length = 705
Score = 31.9 bits (69), Expect = 3.4
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +3
Query: 369 GNXPXXGPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXP 503
G GP G GPPGL P R G EAG P P
Sbjct: 348 GEPGEQGPQGLGGPPGLPGSAGLPGRRGPPGPKGEAGPGGPPGVP 392
Score = 31.5 bits (68), Expect = 4.6
Identities = 17/54 (31%), Positives = 19/54 (35%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPG 548
G G G PGL P P G A G P + P P P + PG
Sbjct: 450 GDLGLPGQPGLRGPSGIPGLQGPAGPIGPQGLPGLKGEPGLPGPPGEGRAGEPG 503
>AC079235-1|AAY14670.1| 1324|Homo sapiens unknown protein.
Length = 1324
Score = 31.9 bits (69), Expect = 3.4
Identities = 18/59 (30%), Positives = 21/59 (35%)
Frame = +3
Query: 369 GNXPXXGPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNP 545
G+ GP G GPPG H P G E G P P+ P P + P
Sbjct: 1115 GSPGRPGPPGSSGPPGCPGDHGMP---GLRGQPGEMGDPGPRGLQGDPGIPGPPGIKGP 1170
>M30838-1|AAA36510.1| 248|Homo sapiens protein ( Human pulmonary
surfactant apoprotein (PSAP) gene, complete cds. ).
Length = 248
Score = 31.5 bits (68), Expect = 4.6
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = +3
Query: 396 GXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXP 521
G G PG H P RHG + G P P P P P
Sbjct: 28 GSPGIPGTPGSHGLPGRHGRDGLKGDLGPPGPMGPPGEMPCP 69
>D17391-1|BAA04214.1| 472|Homo sapiens alpha 4(IV) collagen
protein.
Length = 472
Score = 31.5 bits (68), Expect = 4.6
Identities = 18/65 (27%), Positives = 22/65 (33%)
Frame = +3
Query: 369 GNXPXXGPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPG 548
G+ GP G GPPG P G G P PQ +P P + + P
Sbjct: 74 GDCGLPGPPGPPGPPGPPGYKGFPGCDGKDGQKGPMGFPGPQGPHGFPGPPGEKGLPGPP 133
Query: 549 XEHAP 563
P
Sbjct: 134 GRKGP 138
>X16711-1|CAA34683.1| 1160|Homo sapiens COL2A1 protein.
Length = 1160
Score = 31.1 bits (67), Expect = 6.0
Identities = 20/72 (27%), Positives = 21/72 (29%)
Frame = +3
Query: 369 GNXPXXGPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPG 548
G GP G GPPG G A +AG P PQ P V P
Sbjct: 756 GETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPK 815
Query: 549 XEHAPQNRXAKT 584
Q T
Sbjct: 816 GARGAQGPPGAT 827
>X13783-1|CAA32030.1| 714|Homo sapiens alpha-1 type 2 collagen (714
AA) protein.
Length = 714
Score = 31.1 bits (67), Expect = 6.0
Identities = 20/72 (27%), Positives = 21/72 (29%)
Frame = +3
Query: 369 GNXPXXGPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPG 548
G GP G GPPG G A +AG P PQ P V P
Sbjct: 325 GETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPK 384
Query: 549 XEHAPQNRXAKT 584
Q T
Sbjct: 385 GARGAQGPPGAT 396
>M95610-1|AAA80977.1| 675|Homo sapiens alpha-2 IX collagen protein.
Length = 675
Score = 31.1 bits (67), Expect = 6.0
Identities = 18/60 (30%), Positives = 21/60 (35%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPGXEHAPQ 566
G G G PG P + G + G P PQ P + P K P E PQ
Sbjct: 308 GQAGQPGSPGHQGLAGVPGQPGTKGGPGDQGEPGPQGLPGFSGPPGKEGEPGPRGEIGPQ 367
>L10347-1|AAC41772.1| 1487|Homo sapiens alpha-1 type II collagen
protein.
Length = 1487
Score = 31.1 bits (67), Expect = 6.0
Identities = 20/72 (27%), Positives = 21/72 (29%)
Frame = +3
Query: 369 GNXPXXGPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPG 548
G GP G GPPG G A +AG P PQ P V P
Sbjct: 825 GETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPK 884
Query: 549 XEHAPQNRXAKT 584
Q T
Sbjct: 885 GARGAQGPPGAT 896
>K03475-1|AAA36520.1| 248|Homo sapiens protein ( Human pulmonary
surfactant-associated protein mRNA, complete cds, clone
MPSAP-1A. ).
Length = 248
Score = 31.1 bits (67), Expect = 6.0
Identities = 22/70 (31%), Positives = 23/70 (32%), Gaps = 1/70 (1%)
Frame = +3
Query: 396 GXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPGXEHAPQNRX 575
G G PG H P R G + G P P P P P PG P R
Sbjct: 28 GSPGIPGTPGSHGLPGRDGRDGVKGDPGPPGPMGPPGETPCPPGNN-GLPGAPGVPGERG 86
Query: 576 AK-TPGTXKP 602
K PG P
Sbjct: 87 EKGEPGERGP 96
>J04177-1|AAA51891.1| 1806|Homo sapiens COL11A1 protein.
Length = 1806
Score = 31.1 bits (67), Expect = 6.0
Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 4/61 (6%)
Frame = +3
Query: 342 RGTXAXXXSGNXPXX-GPXGXXGPPGLXSPHXXP*RHG-XAPAXR--EAGXPXPQXXPXY 509
+G+ G P GP G GPPGL P G PA + ++G P P P
Sbjct: 1479 QGSPGAKGDGGIPGPAGPLGPPGPPGLPGPQGPKGNKGSTGPAGQKGDSGLPGPPGPPGP 1538
Query: 510 P 512
P
Sbjct: 1539 P 1539
>BC117697-1|AAI17698.1| 1690|Homo sapiens COL11A1 protein protein.
Length = 1690
Score = 31.1 bits (67), Expect = 6.0
Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 4/61 (6%)
Frame = +3
Query: 342 RGTXAXXXSGNXPXX-GPXGXXGPPGLXSPHXXP*RHG-XAPAXR--EAGXPXPQXXPXY 509
+G+ G P GP G GPPGL P G PA + ++G P P P
Sbjct: 1363 QGSPGAKGDGGIPGPAGPLGPPGPPGLPGPQGPKGNKGSTGPAGQKGDSGLPGPPGPPGP 1422
Query: 510 P 512
P
Sbjct: 1423 P 1423
>BC116449-1|AAI16450.1| 1487|Homo sapiens collagen, type II, alpha 1
(primary osteoarthritis, spondyloepiphyseal dysplasi
protein.
Length = 1487
Score = 31.1 bits (67), Expect = 6.0
Identities = 20/72 (27%), Positives = 21/72 (29%)
Frame = +3
Query: 369 GNXPXXGPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPG 548
G GP G GPPG G A +AG P PQ P V P
Sbjct: 825 GETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPK 884
Query: 549 XEHAPQNRXAKT 584
Q T
Sbjct: 885 GARGAQGPPGAT 896
>AL627203-1|CAH73908.1| 1806|Homo sapiens collagen type XI alpha 1
protein.
Length = 1806
Score = 31.1 bits (67), Expect = 6.0
Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 4/61 (6%)
Frame = +3
Query: 342 RGTXAXXXSGNXPXX-GPXGXXGPPGLXSPHXXP*RHG-XAPAXR--EAGXPXPQXXPXY 509
+G+ G P GP G GPPGL P G PA + ++G P P P
Sbjct: 1479 QGSPGAKGDGGIPGPAGPLGPPGPPGLPGPQGPKGNKGSTGPAGQKGDSGLPGPPGSPGP 1538
Query: 510 P 512
P
Sbjct: 1539 P 1539
>AL050341-6|CAB81611.1| 689|Homo sapiens collagen type IX alpha 2
protein.
Length = 689
Score = 31.1 bits (67), Expect = 6.0
Identities = 18/60 (30%), Positives = 21/60 (35%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPGXEHAPQ 566
G G G PG P + G + G P PQ P + P K P E PQ
Sbjct: 322 GQAGQPGSPGHQGLAGVPGQPGTKGGPGDQGEPGPQGLPGFSGPPGKEGEPGPRGEIGPQ 381
>AF101112-3|AAF04724.1| 1767|Homo sapiens collagen type XI alpha-1
protein.
Length = 1767
Score = 31.1 bits (67), Expect = 6.0
Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 4/61 (6%)
Frame = +3
Query: 342 RGTXAXXXSGNXPXX-GPXGXXGPPGLXSPHXXP*RHG-XAPAXR--EAGXPXPQXXPXY 509
+G+ G P GP G GPPGL P G PA + ++G P P P
Sbjct: 1440 QGSPGAKGDGGIPGPAGPLGPPGPPGLPGPQGPKGNKGSTGPAGQKGDSGLPGPPGPPGP 1499
Query: 510 P 512
P
Sbjct: 1500 P 1500
>AF101112-2|AAF04726.1| 1818|Homo sapiens collagen type XI alpha-a
isoform B protein.
Length = 1818
Score = 31.1 bits (67), Expect = 6.0
Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 4/61 (6%)
Frame = +3
Query: 342 RGTXAXXXSGNXPXX-GPXGXXGPPGLXSPHXXP*RHG-XAPAXR--EAGXPXPQXXPXY 509
+G+ G P GP G GPPGL P G PA + ++G P P P
Sbjct: 1491 QGSPGAKGDGGIPGPAGPLGPPGPPGLPGPQGPKGNKGSTGPAGQKGDSGLPGPPGPPGP 1550
Query: 510 P 512
P
Sbjct: 1551 P 1551
>AF101112-1|AAF04725.1| 1806|Homo sapiens collagen type XI alpha-1
isoform A protein.
Length = 1806
Score = 31.1 bits (67), Expect = 6.0
Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 4/61 (6%)
Frame = +3
Query: 342 RGTXAXXXSGNXPXX-GPXGXXGPPGLXSPHXXP*RHG-XAPAXR--EAGXPXPQXXPXY 509
+G+ G P GP G GPPGL P G PA + ++G P P P
Sbjct: 1479 QGSPGAKGDGGIPGPAGPLGPPGPPGLPGPQGPKGNKGSTGPAGQKGDSGLPGPPGPPGP 1538
Query: 510 P 512
P
Sbjct: 1539 P 1539
>AF019406-1|AAC33512.1| 689|Homo sapiens collagen type IX alpha 2
chain protein.
Length = 689
Score = 31.1 bits (67), Expect = 6.0
Identities = 18/60 (30%), Positives = 21/60 (35%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPGXEHAPQ 566
G G G PG P + G + G P PQ P + P K P E PQ
Sbjct: 322 GQAGQPGSPGHQGLAGVPGQPGTKGGPGDQGEPGPQGLPGFSGPPGKEGEPGPRGEIGPQ 381
>AB208844-1|BAD92081.1| 1017|Homo sapiens alpha 1 type XI collagen
isoform C preproprotein variant protein.
Length = 1017
Score = 31.1 bits (67), Expect = 6.0
Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 4/61 (6%)
Frame = +3
Query: 342 RGTXAXXXSGNXPXX-GPXGXXGPPGLXSPHXXP*RHG-XAPAXR--EAGXPXPQXXPXY 509
+G+ G P GP G GPPGL P G PA + ++G P P P
Sbjct: 690 QGSPGAKGDGGIPGPAGPLGPPGPPGLPGPQGPKGNKGSTGPAGQKGDSGLPGPPGPPGP 749
Query: 510 P 512
P
Sbjct: 750 P 750
>AC107069-1|AAX93111.1| 538|Homo sapiens unknown protein.
Length = 538
Score = 30.7 bits (66), Expect = 8.0
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXP 521
GP G G PGL P R G A G P P +P P
Sbjct: 436 GPPGLPGLPGLHGVKGIPGRQGAAGLKGSPGSPGNTGLPGFPGFP 480
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,781,026
Number of Sequences: 237096
Number of extensions: 721930
Number of successful extensions: 9557
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 2234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8039
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12270013262
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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