Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_P07
(937 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen... 41 0.001
AF047656-13|AAC05105.1| 313|Caenorhabditis elegans Collagen pro... 36 0.042
AF067607-9|AAF98609.1| 460|Caenorhabditis elegans Collagen prot... 35 0.073
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 34 0.17
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 34 0.17
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 34 0.17
U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protei... 33 0.22
M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein. 33 0.22
AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen prot... 33 0.29
Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical pr... 33 0.39
Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical pr... 33 0.39
AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen prot... 33 0.39
AF003139-6|AAB54156.1| 327|Caenorhabditis elegans Collagen prot... 33 0.39
Z78064-2|CAB01508.2| 317|Caenorhabditis elegans Hypothetical pr... 32 0.51
Z73972-2|CAA98258.1| 316|Caenorhabditis elegans Hypothetical pr... 32 0.51
Z73972-1|CAA98257.1| 316|Caenorhabditis elegans Hypothetical pr... 32 0.51
X51623-1|CAA35955.1| 316|Caenorhabditis elegans collagen protein. 32 0.51
X51622-1|CAA35954.1| 316|Caenorhabditis elegans collagen protein. 32 0.51
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 32 0.51
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 32 0.51
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 32 0.51
AF036699-5|AAB88359.1| 290|Caenorhabditis elegans Collagen prot... 32 0.51
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 32 0.68
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 32 0.68
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 0.68
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 0.68
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 0.68
Z82083-5|CAB04973.1| 298|Caenorhabditis elegans Hypothetical pr... 26 0.72
U80444-2|AAB37788.1| 305|Caenorhabditis elegans Collagen protei... 31 0.90
U58755-13|AAB00702.1| 348|Caenorhabditis elegans Collagen prote... 31 0.90
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 31 0.90
Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 31 1.6
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 31 1.6
Z77132-3|CAB00860.1| 310|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z77132-2|CAB00858.1| 294|Caenorhabditis elegans Hypothetical pr... 30 2.1
AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical... 30 2.1
AF003386-13|AAB54250.1| 311|Caenorhabditis elegans Blistered cu... 30 2.1
Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z70682-4|CAA94581.1| 299|Caenorhabditis elegans Hypothetical pr... 30 2.7
AL021448-3|CAA16275.1| 291|Caenorhabditis elegans Hypothetical ... 30 2.7
AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen prot... 30 2.7
Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical p... 29 3.6
Z81050-3|CAB02849.1| 291|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical pr... 29 3.6
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 29 3.6
U42439-7|AAA83511.1| 304|Caenorhabditis elegans Collagen protei... 29 3.6
L23651-12|AAA27958.1| 305|Caenorhabditis elegans Collagen prote... 29 3.6
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 29 3.6
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 29 3.6
AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen prot... 29 3.6
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical pr... 29 4.8
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 29 4.8
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 29 4.8
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 29 4.8
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 29 4.8
L11247-3|AAA28008.1| 278|Caenorhabditis elegans Collagen protei... 29 4.8
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 29 4.8
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 29 4.8
Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 29 6.3
U42437-5|AAA83499.1| 302|Caenorhabditis elegans Dumpy : shorter... 29 6.3
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 6.3
U23520-6|AAC46553.1| 287|Caenorhabditis elegans Collagen protei... 29 6.3
M23559-1|AAA27994.1| 302|Caenorhabditis elegans protein ( C.ele... 29 6.3
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 29 6.3
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z71258-1|CAA95780.1| 307|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical pr... 28 8.3
U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protei... 28 8.3
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 28 8.3
AC024805-16|AAK39336.1| 448|Caenorhabditis elegans Hypothetical... 28 8.3
>L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen
protein.
Length = 308
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/73 (34%), Positives = 28/73 (38%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPGXEHAPQ 566
GP G GPPG P P G P+ G P P P PG AP
Sbjct: 168 GPPGGPGPPGPPGPEGAPGEDGNTPSRGGVGEAGPPGPPGTSGNPGTDGA--PGNPGAP- 224
Query: 567 NRXAKTPGTXKPA 605
+ +TPGT PA
Sbjct: 225 GQVTETPGTPGPA 237
Score = 29.5 bits (63), Expect = 3.6
Identities = 24/84 (28%), Positives = 26/84 (30%)
Frame = +3
Query: 354 AXXXSGNXPXXGPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXX 533
A GN P G G GPPG P G AP A + P
Sbjct: 184 APGEDGNTPSRGGVGEAGPPGPPGTSGNPGTDG-APGNPGAPGQVTETPGTPGPAGAAGP 242
Query: 534 VXNPGXEHAPQNRXAKTPGTXKPA 605
PG P + A PG PA
Sbjct: 243 PGPPGPAGNPGSAGASEPGPAGPA 266
>AF047656-13|AAC05105.1| 313|Caenorhabditis elegans Collagen
protein 116 protein.
Length = 313
Score = 35.9 bits (79), Expect = 0.042
Identities = 22/68 (32%), Positives = 23/68 (33%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPGXEHAPQ 566
G G GPPG P G P G P P P YP P + P
Sbjct: 160 GAPGPNGPPGYEGQMGVPGLPGDGPTPGSPGPPGPPGPPGYPGRQGCQGKDGPSGD--PG 217
Query: 567 NRXAKTPG 590
R KTPG
Sbjct: 218 LRFIKTPG 225
>AF067607-9|AAF98609.1| 460|Caenorhabditis elegans Collagen protein
102 protein.
Length = 460
Score = 35.1 bits (77), Expect = 0.073
Identities = 25/76 (32%), Positives = 28/76 (36%), Gaps = 4/76 (5%)
Frame = +3
Query: 390 PXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXP--QXXPXYPPXP--XKXXVXNPGXEH 557
P G GPPG P G A A EAG P + P PP P + G
Sbjct: 139 PAGEPGPPGPEGPAGPAGPAGNAGADGEAGAEGPAGEAGPPGPPGPDGKPGAAGSDGEAG 198
Query: 558 APQNRXAKTPGTXKPA 605
AP + PG PA
Sbjct: 199 APGTKTTNAPGEPGPA 214
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/39 (41%), Positives = 17/39 (43%)
Frame = +3
Query: 369 GNXPXXGPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXP 485
G GP G GPPG P P G A + EAG P
Sbjct: 165 GEAGAEGPAGEAGPPGPPGPDGKP---GAAGSDGEAGAP 200
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 33.9 bits (74), Expect = 0.17
Identities = 23/73 (31%), Positives = 26/73 (35%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPGXEHAPQ 566
GP G G G P P G A + EAG P P P N G +P
Sbjct: 107 GPPGPDGSAGPAGPAGNPGADGDAGSPGEAGGAGPPGPPG--PDGNPGAPGNDGEAGSPG 164
Query: 567 NRXAKTPGTXKPA 605
R +PG PA
Sbjct: 165 TRSISSPGPAGPA 177
Score = 30.3 bits (65), Expect = 2.1
Identities = 23/68 (33%), Positives = 26/68 (38%), Gaps = 1/68 (1%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP-*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPGXEHAP 563
GP G GPPG P P G PA AG P P P + PG + AP
Sbjct: 172 GPAGPAGPPGPPGPDGAPGGGSGPGPAG-PAGPPGPDGNPGSAGADGQP--GGPGQDGAP 228
Query: 564 QNRXAKTP 587
+ A P
Sbjct: 229 GSDAAYCP 236
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical
protein Y41E3.2 protein.
Length = 289
Score = 33.9 bits (74), Expect = 0.17
Identities = 21/72 (29%), Positives = 25/72 (34%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPGXEHAPQ 566
GP G G PG+ + P G G P P+ P PP P PG +P
Sbjct: 141 GPPGPPGQPGIPGDNGPPGEQGPKGPDAAPGEPGPK-GPIGPPGP-PGQAGAPGEPGSPA 198
Query: 567 NRXAKTPGTXKP 602
PG P
Sbjct: 199 KSEPAVPGPPGP 210
Score = 28.3 bits (60), Expect = 8.3
Identities = 21/78 (26%), Positives = 23/78 (29%)
Frame = +3
Query: 369 GNXPXXGPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPG 548
G G G G PG P + P P PQ P P P P
Sbjct: 99 GTPGKPGKPGKPGAPGQPGTPGRPPQQPCEPTTPPPCQPCPQGPPGPPGQPGIPGDNGPP 158
Query: 549 XEHAPQNRXAKTPGTXKP 602
E P+ A PG P
Sbjct: 159 GEQGPKGPDA-APGEPGP 175
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 33.9 bits (74), Expect = 0.17
Identities = 23/73 (31%), Positives = 26/73 (35%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPGXEHAPQ 566
GP G G G P P G A + EAG P P P N G +P
Sbjct: 107 GPPGPDGSAGPAGPAGNPGADGDAGSPGEAGGAGPPGPPG--PDGNPGAPGNDGEAGSPG 164
Query: 567 NRXAKTPGTXKPA 605
R +PG PA
Sbjct: 165 TRSISSPGPAGPA 177
Score = 30.3 bits (65), Expect = 2.1
Identities = 23/68 (33%), Positives = 26/68 (38%), Gaps = 1/68 (1%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP-*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPGXEHAP 563
GP G GPPG P P G PA AG P P P + PG + AP
Sbjct: 172 GPAGPAGPPGPPGPDGAPGGGSGPGPAG-PAGPPGPDGNPGSAGADGQP--GGPGQDGAP 228
Query: 564 QNRXAKTP 587
+ A P
Sbjct: 229 GSDAAYCP 236
>U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protein
14 protein.
Length = 345
Score = 33.5 bits (73), Expect = 0.22
Identities = 18/59 (30%), Positives = 21/59 (35%)
Frame = +3
Query: 378 PXXGPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPGXE 554
P P G GPPG P P G A + G P+ P P P + P E
Sbjct: 201 PCEAPPGDGGPPGQPGPDGPPGAPGNAGEDGKPGDQGPRGPPGIPGAPGQPGRPGPPGE 259
Score = 32.7 bits (71), Expect = 0.39
Identities = 19/59 (32%), Positives = 22/59 (37%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPGXEHAP 563
G G GPPG P P +G +G P P P P + V PG AP
Sbjct: 274 GAPGRPGPPGQPGPAGPPGENGKGGGQGPSGLPGPPGQPGQNGAPGE--VGQPGDNGAP 330
>M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein.
Length = 326
Score = 33.5 bits (73), Expect = 0.22
Identities = 18/59 (30%), Positives = 21/59 (35%)
Frame = +3
Query: 378 PXXGPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPGXE 554
P P G GPPG P P G A + G P+ P P P + P E
Sbjct: 182 PCEAPPGDGGPPGQPGPDGPPGAPGNAGEDGKPGDQGPRGPPGIPGAPGQPGRPGPPGE 240
Score = 32.7 bits (71), Expect = 0.39
Identities = 19/59 (32%), Positives = 22/59 (37%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPGXEHAP 563
G G GPPG P P +G +G P P P P + V PG AP
Sbjct: 255 GAPGRPGPPGQPGPAGPPGENGKGGGQGPSGLPGPPGQPGQNGAPGE--VGQPGDNGAP 311
>AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen protein
70 protein.
Length = 530
Score = 33.1 bits (72), Expect = 0.29
Identities = 16/45 (35%), Positives = 18/45 (40%)
Frame = -1
Query: 520 GXGG*XGXCWGXGXPASRXAGAXPWRQGXXXGEXSPGGPXSPXGP 386
G G G G G P P G G +PGGP +P GP
Sbjct: 101 GGPGNPGGPGGLGTPGGPGTPGGPGNPGGLGGPGNPGGPGTPGGP 145
>Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.3 protein.
Length = 283
Score = 32.7 bits (71), Expect = 0.39
Identities = 24/76 (31%), Positives = 25/76 (32%), Gaps = 2/76 (2%)
Frame = +3
Query: 369 GNXPXXGPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPG 548
G GP G GPPG P R G A R A P P P P P P
Sbjct: 169 GRGGNRGPPGPRGPPGEAGPDGEGGRPGQAGQTRSA--PSPPGQPGQPGEPGSPGEPGPD 226
Query: 549 XE--HAPQNRXAKTPG 590
H +N PG
Sbjct: 227 GRAGHPGRNGPPGPPG 242
>Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.2 protein.
Length = 283
Score = 32.7 bits (71), Expect = 0.39
Identities = 24/76 (31%), Positives = 25/76 (32%), Gaps = 2/76 (2%)
Frame = +3
Query: 369 GNXPXXGPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPG 548
G GP G GPPG P R G A R A P P P P P P
Sbjct: 169 GRGGNRGPPGPRGPPGEAGPDGEGGRPGQAGQTRSA--PSPPGQPGQPGEPGSPGEPGPD 226
Query: 549 XE--HAPQNRXAKTPG 590
H +N PG
Sbjct: 227 GRAGHPGRNGPPGPPG 242
>AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen protein
101 protein.
Length = 314
Score = 32.7 bits (71), Expect = 0.39
Identities = 23/73 (31%), Positives = 25/73 (34%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPGXEHAPQ 566
GP G G PG P P + G + G P P P P N G AP
Sbjct: 174 GPPGPSGAPGQKGPSGAPGQPGRSGGASLPGPPGPAGPPGPSGQPGSN--GNAGAPGAP- 230
Query: 567 NRXAKTPGTXKPA 605
PGT PA
Sbjct: 231 GHVVDVPGTPGPA 243
>AF003139-6|AAB54156.1| 327|Caenorhabditis elegans Collagen protein
45 protein.
Length = 327
Score = 32.7 bits (71), Expect = 0.39
Identities = 20/64 (31%), Positives = 22/64 (34%), Gaps = 2/64 (3%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYP--PXPXKXXVXNPGXEHA 560
G G GPPG P G A + G P P P P P P G +H
Sbjct: 259 GEMGPQGPPGPPGPRGKDGAGGEKGAPGDQGNPGPYGKPGQPGAPGPDGSAGEKGGCDHC 318
Query: 561 PQNR 572
P R
Sbjct: 319 PPPR 322
>Z78064-2|CAB01508.2| 317|Caenorhabditis elegans Hypothetical
protein F57B1.4 protein.
Length = 317
Score = 32.3 bits (70), Expect = 0.51
Identities = 23/73 (31%), Positives = 25/73 (34%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPGXEHAPQ 566
GP G G PG P P G + G P P P P N G AP
Sbjct: 177 GPPGPSGAPGQKGPSGAPGAPGQSGGASLPGPPGPAGPPGPSGQPGSN--GNAGAPGAP- 233
Query: 567 NRXAKTPGTXKPA 605
+ PGT PA
Sbjct: 234 GQVVDVPGTPGPA 246
>Z73972-2|CAA98258.1| 316|Caenorhabditis elegans Hypothetical
protein F15H10.2 protein.
Length = 316
Score = 32.3 bits (70), Expect = 0.51
Identities = 23/73 (31%), Positives = 25/73 (34%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPGXEHAPQ 566
GP G G PG P P G + G P P P P N G AP
Sbjct: 176 GPPGPSGAPGQKGPSGAPGAPGQSGGAALPGPPGPAGPPGPAGQPGSN--GNAGAPGAP- 232
Query: 567 NRXAKTPGTXKPA 605
+ PGT PA
Sbjct: 233 GQVVDVPGTPGPA 245
>Z73972-1|CAA98257.1| 316|Caenorhabditis elegans Hypothetical
protein F15H10.1 protein.
Length = 316
Score = 32.3 bits (70), Expect = 0.51
Identities = 23/73 (31%), Positives = 25/73 (34%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPGXEHAPQ 566
GP G G PG P P G + G P P P P N G AP
Sbjct: 176 GPPGPSGAPGQKGPSGAPGAPGQSGGAALPGPPGPAGPPGPAGQPGSN--GNAGAPGAP- 232
Query: 567 NRXAKTPGTXKPA 605
+ PGT PA
Sbjct: 233 GQVVDVPGTPGPA 245
>X51623-1|CAA35955.1| 316|Caenorhabditis elegans collagen protein.
Length = 316
Score = 32.3 bits (70), Expect = 0.51
Identities = 23/73 (31%), Positives = 25/73 (34%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPGXEHAPQ 566
GP G G PG P P G + G P P P P N G AP
Sbjct: 176 GPPGPSGAPGQKGPSGAPGAPGQSGGAALPGPPGPAGPPGPAGQPGSN--GNAGAPGAP- 232
Query: 567 NRXAKTPGTXKPA 605
+ PGT PA
Sbjct: 233 GQVVDVPGTPGPA 245
>X51622-1|CAA35954.1| 316|Caenorhabditis elegans collagen protein.
Length = 316
Score = 32.3 bits (70), Expect = 0.51
Identities = 23/73 (31%), Positives = 25/73 (34%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPGXEHAPQ 566
GP G G PG P P G + G P P P P N G AP
Sbjct: 176 GPPGPSGAPGQKGPSGAPGAPGQSGGAALPGPPGPAGPPGPAGQPGSN--GNAGAPGAP- 232
Query: 567 NRXAKTPGTXKPA 605
+ PGT PA
Sbjct: 233 GQVVDVPGTPGPA 245
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 32.3 bits (70), Expect = 0.51
Identities = 21/72 (29%), Positives = 22/72 (30%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPGXEHAPQ 566
GP G GPPG P G G P P+ P P P PG P
Sbjct: 151 GPPGPPGPPGPPGDSGEPGSPGLPGQDAAPGEPGPKGPPGPPGAPGAP--GTPGEPGVPA 208
Query: 567 NRXAKTPGTXKP 602
PG P
Sbjct: 209 QSEPLIPGEPGP 220
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 32.3 bits (70), Expect = 0.51
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXP 503
GP G GPPG P+ P G A G P P P
Sbjct: 158 GPLGPPGPPGPEGPNGEPGNKGPAGPPGPGGKPGPAGPP 196
Score = 29.5 bits (63), Expect = 3.6
Identities = 18/60 (30%), Positives = 21/60 (35%)
Frame = +1
Query: 439 PDATGPPXPXXKRXXLXPSXPPXTRRPXQXPXXITQGXNMPPKTAXXKXXEPXNPPXXSG 618
P GPP P + L P PP P P +G PP P PP +G
Sbjct: 145 PGPAGPPGPDGNKGPLGPPGPPGPEGPNGEPG--NKGPAGPPGPGGKPG--PAGPPGENG 200
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 32.3 bits (70), Expect = 0.51
Identities = 21/72 (29%), Positives = 22/72 (30%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPGXEHAPQ 566
GP G GPPG P G G P P+ P P P PG P
Sbjct: 151 GPPGPPGPPGPPGDSGEPGSPGLPGQDAAPGEPGPKGPPGPPGAPGAP--GTPGEPGVPA 208
Query: 567 NRXAKTPGTXKP 602
PG P
Sbjct: 209 QSEPLIPGEPGP 220
>AF036699-5|AAB88359.1| 290|Caenorhabditis elegans Collagen protein
105 protein.
Length = 290
Score = 32.3 bits (70), Expect = 0.51
Identities = 21/69 (30%), Positives = 22/69 (31%), Gaps = 1/69 (1%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXV-XNPGXEHAP 563
GP G GP G P G E G P P P P P + PG P
Sbjct: 142 GPPGKPGPQGAPGDIGQPGNPGERGMDGEPGPPGPTGPPGEPGLPGAQGITGQPGVNAEP 201
Query: 564 QNRXAKTPG 590
A PG
Sbjct: 202 VAYRAGAPG 210
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 31.9 bits (69), Expect = 0.68
Identities = 23/72 (31%), Positives = 26/72 (36%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPGXEHAPQ 566
GP G GPPG P G P+ AG P P P P + PG AP
Sbjct: 175 GPAGNAGPPGAPGGPGAP---GNTPSGGAAGPPGPPGPPGGPGNDGQP--GGPGNPGAP- 228
Query: 567 NRXAKTPGTXKP 602
+ PG P
Sbjct: 229 GAVTEVPGQQGP 240
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 31.9 bits (69), Expect = 0.68
Identities = 24/79 (30%), Positives = 26/79 (32%)
Frame = +3
Query: 369 GNXPXXGPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPG 548
GN P G G GPPG P P G AP A + P PG
Sbjct: 199 GNTPSGGGEGPAGPPGPPGPAGNPGTDG-APGNPGAPGQVTETPGTPGPAGAAGPPGPPG 257
Query: 549 XEHAPQNRXAKTPGTXKPA 605
P + A PG PA
Sbjct: 258 PAGNPGSAGASEPGPAGPA 276
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.9 bits (69), Expect = 0.68
Identities = 25/88 (28%), Positives = 29/88 (32%), Gaps = 1/88 (1%)
Frame = +3
Query: 342 RGTXAXXXSGNXPXXGPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXP 521
+G+ SG+ P G PP SP P G P G P P PP P
Sbjct: 244 KGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPP--TGSPPPPPAGGSPPPPRAGSPPPPP 301
Query: 522 XKXXVXNPGXEHAPQNRXAKTP-GTXKP 602
G PQ + P GT P
Sbjct: 302 PPRGSPPTGSLPPPQAGGSPPPAGTGSP 329
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.9 bits (69), Expect = 0.68
Identities = 25/88 (28%), Positives = 29/88 (32%), Gaps = 1/88 (1%)
Frame = +3
Query: 342 RGTXAXXXSGNXPXXGPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXP 521
+G+ SG+ P G PP SP P G P G P P PP P
Sbjct: 265 KGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPP--TGSPPPPPAGGSPPPPRAGSPPPPP 322
Query: 522 XKXXVXNPGXEHAPQNRXAKTP-GTXKP 602
G PQ + P GT P
Sbjct: 323 PPRGSPPTGSLPPPQAGGSPPPAGTGSP 350
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.9 bits (69), Expect = 0.68
Identities = 25/88 (28%), Positives = 29/88 (32%), Gaps = 1/88 (1%)
Frame = +3
Query: 342 RGTXAXXXSGNXPXXGPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXP 521
+G+ SG+ P G PP SP P G P G P P PP P
Sbjct: 250 KGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPP--TGSPPPPPAGGSPPPPRAGSPPPPP 307
Query: 522 XKXXVXNPGXEHAPQNRXAKTP-GTXKP 602
G PQ + P GT P
Sbjct: 308 PPRGSPPTGSLPPPQAGGSPPPAGTGSP 335
>Z82083-5|CAB04973.1| 298|Caenorhabditis elegans Hypothetical
protein ZK1010.7 protein.
Length = 298
Score = 26.2 bits (55), Expect(2) = 0.72
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +3
Query: 396 GXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYP 512
G G PG P P G A G P PQ P P
Sbjct: 215 GDPGAPGEPGPSGLPGDQGQAGRPGSDGAPGPQGPPGPP 253
Score = 24.2 bits (50), Expect(2) = 0.72
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +3
Query: 366 SGNXPXXGPXGXXGPPG 416
+GN GP G GPPG
Sbjct: 173 NGNDGGVGPQGPPGPPG 189
>U80444-2|AAB37788.1| 305|Caenorhabditis elegans Collagen protein
58 protein.
Length = 305
Score = 31.5 bits (68), Expect = 0.90
Identities = 25/85 (29%), Positives = 28/85 (32%), Gaps = 3/85 (3%)
Frame = +3
Query: 345 GTXAXXXSGNXPXXGPXGXXGPPGLXSP---HXXP*RHGXAPAXREAGXPXPQXXPXYPP 515
G A +G GP G G PG+ P RHG E G P P P +
Sbjct: 156 GRCAQCPAGPMGPPGPRGPPGVPGITGAPGLDGIPGRHGTPGYPGEPGLPGPVGDPGFDG 215
Query: 516 XPXKXXVXNPGXEHAPQNRXAKTPG 590
P NPG R PG
Sbjct: 216 KP-----GNPGNNGVRVRRIPGPPG 235
>U58755-13|AAB00702.1| 348|Caenorhabditis elegans Collagen protein
113 protein.
Length = 348
Score = 31.5 bits (68), Expect = 0.90
Identities = 20/61 (32%), Positives = 22/61 (36%), Gaps = 1/61 (1%)
Frame = +3
Query: 369 GNXPXXGPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXK-XXVXNP 545
G GP G GPPG P P R G E+G P P P + V P
Sbjct: 218 GQKGPIGPKGDSGPPGQKGPSGYPGRDGQRGNDGESGPVGPSGQLGMPGEPGQIGMVGAP 277
Query: 546 G 548
G
Sbjct: 278 G 278
Score = 28.3 bits (60), Expect = 8.3
Identities = 18/56 (32%), Positives = 18/56 (32%), Gaps = 3/56 (5%)
Frame = +3
Query: 387 GPXGXXGPP---GLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNP 545
GP G GPP G P P G G P Q P P P K P
Sbjct: 155 GPRGPTGPPGETGPSGPEGPPGNPGRIGEHGREGYPGQQGIPGEPGKPGKLGEAGP 210
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 31.5 bits (68), Expect = 0.90
Identities = 23/80 (28%), Positives = 26/80 (32%), Gaps = 5/80 (6%)
Frame = -1
Query: 562 GACSXPGLXTXXFXGXGG*XGXCWGXGXPASRXAGAX-----PWRQGXXXGEXSPGGPXS 398
G PG T G G G G P +G P G + PGGP
Sbjct: 235 GQPGAPGTNTVNSPGGPGPAGPPGPPGPPGQDGSGGAAQPGPPGPPGPPGNDGQPGGPGQ 294
Query: 397 PXGPXXGXLPXSLXAXVPLP 338
P GP P + A P P
Sbjct: 295 PGGPGQDGGPGTDAAYCPCP 314
Score = 29.9 bits (64), Expect = 2.7
Identities = 20/57 (35%), Positives = 23/57 (40%), Gaps = 5/57 (8%)
Frame = +3
Query: 366 SGNXPXXGPXGXXGPPGLXSPHXXP*RHG--XAP---AXREAGXPXPQXXPXYPPXP 521
+G+ P GP G GPPG P + G AP G P P P PP P
Sbjct: 207 AGSPPPPGPPGPPGPPGNDGQPGAPGQDGQPGAPGTNTVNSPGGPGPAGPPG-PPGP 262
>Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical
protein F57B1.3 protein.
Length = 313
Score = 31.1 bits (67), Expect = 1.2
Identities = 23/73 (31%), Positives = 24/73 (32%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPGXEHAPQ 566
GP G G PG P P G G P P P P N G AP
Sbjct: 173 GPPGPSGAPGQKGPSGAPGVPGQTGGASLPGPPGPAGPPGPSGQPGSN--GNAGAPGAP- 229
Query: 567 NRXAKTPGTXKPA 605
+ PGT PA
Sbjct: 230 GQVVDVPGTPGPA 242
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/67 (26%), Positives = 23/67 (34%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPGXEHAPQ 566
GP G GPPG P+ G A G P P P + +PG P
Sbjct: 156 GPLGPPGPPGPEGPNGTAGNKGPAGPPGPGGKPGPAGPPGENGRNGEPQPGSPGEPGRPG 215
Query: 567 NRXAKTP 587
++ P
Sbjct: 216 QPGSRGP 222
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 30.7 bits (66), Expect = 1.6
Identities = 23/73 (31%), Positives = 25/73 (34%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPGXEHAPQ 566
GP G GP G P G G P PQ P P NPG P
Sbjct: 192 GPPGKQGPKGPNGEPGAPGTPGGNALPGPPGPPGPQGPPGADGLP-----GNPGAPGVP- 245
Query: 567 NRXAKTPGTXKPA 605
+ + PGT PA
Sbjct: 246 GQVIEVPGTPGPA 258
>Z77132-3|CAB00860.1| 310|Caenorhabditis elegans Hypothetical
protein F54D1.3 protein.
Length = 310
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/74 (27%), Positives = 22/74 (29%)
Frame = +3
Query: 366 SGNXPXXGPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNP 545
SG GP G G PG P G + G P P P + P
Sbjct: 174 SGPAGPAGPSGQPGTPGQRGNDGFPGAPGAPGDNGQPGFPGQDGAPGQPGADGQRGAGTP 233
Query: 546 GXEHAPQNRXAKTP 587
G AP N P
Sbjct: 234 GAPGAPGNAGPAGP 247
Score = 28.3 bits (60), Expect = 8.3
Identities = 21/68 (30%), Positives = 22/68 (32%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPGXEHAPQ 566
GP G GP G P P G G P P P + PG A
Sbjct: 169 GPAGSSGPAGPAGPSGQPGTPGQRGNDGFPGAPGAPGDNGQPGFPGQDGA--PGQPGADG 226
Query: 567 NRXAKTPG 590
R A TPG
Sbjct: 227 QRGAGTPG 234
>Z77132-2|CAB00858.1| 294|Caenorhabditis elegans Hypothetical
protein F54D1.2 protein.
Length = 294
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/74 (27%), Positives = 22/74 (29%)
Frame = +3
Query: 366 SGNXPXXGPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNP 545
SG GP G G PG P G + G P P P + P
Sbjct: 158 SGPAGPAGPSGQPGTPGQRGNDGFPGAPGAPGDNGQPGFPGQDGAPGQPGADGQRGAGTP 217
Query: 546 GXEHAPQNRXAKTP 587
G AP N P
Sbjct: 218 GAPGAPGNAGPAGP 231
Score = 28.3 bits (60), Expect = 8.3
Identities = 21/68 (30%), Positives = 22/68 (32%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPGXEHAPQ 566
GP G GP G P P G G P P P + PG A
Sbjct: 153 GPAGSSGPAGPAGPSGQPGTPGQRGNDGFPGAPGAPGDNGQPGFPGQDGA--PGQPGADG 210
Query: 567 NRXAKTPG 590
R A TPG
Sbjct: 211 QRGAGTPG 218
>AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical
protein Y51H4A.9 protein.
Length = 351
Score = 30.3 bits (65), Expect = 2.1
Identities = 22/73 (30%), Positives = 24/73 (32%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPGXEHAPQ 566
GP G G PG P P G + G P P P P N G AP
Sbjct: 211 GPPGPSGAPGQKGPSGAPGAPGQSGGSALPGPPGPAGSPGRSGQPGSN--GNVGAPGAP- 267
Query: 567 NRXAKTPGTXKPA 605
+ PG PA
Sbjct: 268 GQVVDVPGAPGPA 280
>AF003386-13|AAB54250.1| 311|Caenorhabditis elegans Blistered
cuticle protein 2 protein.
Length = 311
Score = 30.3 bits (65), Expect = 2.1
Identities = 24/72 (33%), Positives = 24/72 (33%), Gaps = 8/72 (11%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXRE---AGXPXPQXXPXYP-----PXPXKXXVXN 542
GP G GPPGL P P G E AG P P P P
Sbjct: 237 GPPGSPGPPGLPGPDGLPGTPGNPGQDGEQGPAGEPGRDGKDGQPGRPGQPGPPGEPGTG 296
Query: 543 PGXEHAPQNRXA 578
G EH P R A
Sbjct: 297 GGCEHCPTPRTA 308
>Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.6 protein.
Length = 290
Score = 29.9 bits (64), Expect = 2.7
Identities = 21/67 (31%), Positives = 24/67 (35%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPGXEHAPQ 566
GP G GP G P + G A A AG P P P + PG + AP
Sbjct: 202 GPAGAPGPQGPAGGPGQPGQSGGAGAPGPAGAPGAPGGPGQPGQDGQPGA--PGNDGAPG 259
Query: 567 NRXAKTP 587
A P
Sbjct: 260 GDAAYCP 266
>Z70682-4|CAA94581.1| 299|Caenorhabditis elegans Hypothetical
protein F08G5.4 protein.
Length = 299
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/59 (30%), Positives = 20/59 (33%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPGXEHAP 563
G G G PG P P G A +AG P P P P + G AP
Sbjct: 154 GAPGPDGQPGQDGPAGQPGAPGPAGPEGDAGAPGDAGAPGAPGAPGQDGQRGTGLPGAP 212
>AL021448-3|CAA16275.1| 291|Caenorhabditis elegans Hypothetical
protein Y2H9A.3 protein.
Length = 291
Score = 29.9 bits (64), Expect = 2.7
Identities = 20/68 (29%), Positives = 23/68 (33%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPGXEHAPQ 566
GP G G PG P P + G AG P P P + PG
Sbjct: 139 GPAGEAGAPGPAGPDGQPGQDGQGGQPGPAGPAGPAGDAGAPGAPGQD--GQPGAPGQDG 196
Query: 567 NRXAKTPG 590
+R TPG
Sbjct: 197 HRSTGTPG 204
>AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen protein
48 protein.
Length = 285
Score = 29.9 bits (64), Expect = 2.7
Identities = 25/72 (34%), Positives = 26/72 (36%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPGXEHAPQ 566
G G GPPG P R+G E G P PQ P PP P PG P
Sbjct: 146 GLGGPPGPPGQDGIPGNPGRNG------EDGAPGPQ-GPSGPPGP-PGQPGQPGQRGPPG 197
Query: 567 NRXAKTPGTXKP 602
A PG P
Sbjct: 198 EPGALLPGGDAP 209
>Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical
protein Y69H2.14 protein.
Length = 338
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/39 (43%), Positives = 17/39 (43%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXP 503
GP G GPPGL P P HG G P PQ P
Sbjct: 265 GPPGPQGPPGLAGPDGQP-GHGG------GGQPGPQGPP 296
>Z81050-3|CAB02849.1| 291|Caenorhabditis elegans Hypothetical
protein C50B6.4 protein.
Length = 291
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/68 (29%), Positives = 22/68 (32%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPGXEHAPQ 566
GP G G PG P P + G AG P P P + PG
Sbjct: 139 GPAGEAGAPGPAGPDGQPGQDGQGGQPGPAGPAGPAGDAGAPGAPGQD--GQPGAPGQDG 196
Query: 567 NRXAKTPG 590
R TPG
Sbjct: 197 QRSTGTPG 204
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = -1
Query: 520 GXGG*XGXCWGXGXPASRXAGAXPWRQGXXXGEXSPGGPXSP 395
G GG G C G P G P + G +PG P +P
Sbjct: 90 GGGGGGGGCDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNP 131
>Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical
protein M110.1 protein.
Length = 499
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/45 (35%), Positives = 18/45 (40%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXP 521
GP G G PGL + R+G A P Q P PP P
Sbjct: 99 GPDGGPGQPGLIGLNGRNGRNGKYVASEAHNEPACQKCPVAPPGP 143
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = -1
Query: 520 GXGG*XGXCWGXGXPASRXAGAXPWRQGXXXGEXSPGGPXSP 395
G GG G C G P G P + G +PG P +P
Sbjct: 90 GGGGGGGGCDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNP 131
>U42439-7|AAA83511.1| 304|Caenorhabditis elegans Collagen protein
110 protein.
Length = 304
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/55 (27%), Positives = 20/55 (36%)
Frame = -1
Query: 502 GXCWGXGXPASRXAGAXPWRQGXXXGEXSPGGPXSPXGPXXGXLPXSLXAXVPLP 338
G C G P + P R G +PG P +P P G +L + P
Sbjct: 97 GTCDGCCIPGAPGPSGTPGRHGRHGAPGAPGRPGNPGEPPRGPCDPTLASPCDCP 151
>L23651-12|AAA27958.1| 305|Caenorhabditis elegans Collagen protein
90 protein.
Length = 305
Score = 29.5 bits (63), Expect = 3.6
Identities = 21/77 (27%), Positives = 25/77 (32%), Gaps = 5/77 (6%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPGXEHA-- 560
G G G PGL H P + G G P YP P K + A
Sbjct: 214 GEPGWLGQPGLPGKHGEPGQDGEEGPKGAPGTPGSNGRDAYPGQPGKAGEPGAVGKDANY 273
Query: 561 ---PQNRXAKTPGTXKP 602
P R +KT +P
Sbjct: 274 CPCPARRDSKTESVHEP 290
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = -1
Query: 520 GXGG*XGXCWGXGXPASRXAGAXPWRQGXXXGEXSPGGPXSP 395
G GG G C G P G P + G +PG P +P
Sbjct: 90 GGGGGGGGCDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNP 131
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = -1
Query: 520 GXGG*XGXCWGXGXPASRXAGAXPWRQGXXXGEXSPGGPXSP 395
G GG G C G P G P + G +PG P +P
Sbjct: 90 GGGGGGGGCDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNP 131
>AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen protein
50 protein.
Length = 418
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = -1
Query: 490 GXGXPASRXAGAXPWRQGXXXGEXSPGGPXSPXGP 386
G PA A P +G E P GP P GP
Sbjct: 177 GNAGPAGPAGAAGPDGEGAGYAEPGPAGPAGPPGP 211
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical
protein F33E2.6 protein.
Length = 846
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/59 (27%), Positives = 18/59 (30%)
Frame = +1
Query: 430 TXXPDATGPPXPXXKRXXLXPSXPPXTRRPXQXPXXITQGXNMPPKTAXXKXXEPXNPP 606
T P T PP + + PP P P PPKT K P P
Sbjct: 364 TTVPPKTDPPRTEPPKTEPPTTEPPKIEPPRTEPPKTEPPPTEPPKTEPPKTTPPKTEP 422
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/52 (26%), Positives = 18/52 (34%)
Frame = +1
Query: 439 PDATGPPXPXXKRXXLXPSXPPXTRRPXQXPXXITQGXNMPPKTAXXKXXEP 594
P T PP R + + PP T P P +PP+T P
Sbjct: 600 PPRTEPPMTEAPRTEVPMTEPPKTEPPRTAPPRTEVSMTLPPETVPPNTEAP 651
>Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.6 protein.
Length = 316
Score = 29.1 bits (62), Expect = 4.8
Identities = 20/68 (29%), Positives = 24/68 (35%), Gaps = 1/68 (1%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXN-PGXEHAP 563
G G G PG P P + G A AG P P P P + PG + P
Sbjct: 204 GLPGPSGAPGSQGPPGAPGQPGSGNAPGPAGPPGPAGPNGQPGHPGQDGQPGAPGNDGTP 263
Query: 564 QNRXAKTP 587
+ A P
Sbjct: 264 GSDAAYCP 271
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXP 491
G G GPPG P P G A +AG P P
Sbjct: 238 GAPGNDGPPGPPGPKGSPGPDGPAGVDGQAGPPGP 272
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 29.1 bits (62), Expect = 4.8
Identities = 19/55 (34%), Positives = 19/55 (34%), Gaps = 2/55 (3%)
Frame = -1
Query: 520 GXGG*XGXCWGXGXPASRXAGAXPWRQGXXXGEXSPGGPXSPXGP--XXGXLPXS 362
G GG G G P G P G GGP P GP G LP S
Sbjct: 170 GMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGGPGGMLPKS 224
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 29.1 bits (62), Expect = 4.8
Identities = 19/55 (34%), Positives = 19/55 (34%), Gaps = 2/55 (3%)
Frame = -1
Query: 520 GXGG*XGXCWGXGXPASRXAGAXPWRQGXXXGEXSPGGPXSPXGP--XXGXLPXS 362
G GG G G P G P G GGP P GP G LP S
Sbjct: 450 GMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGGPGGMLPKS 504
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXP 521
GP G GPPG P G A E G P+ P P P
Sbjct: 154 GPPGPPGPPGDSGEPGSPGLPGQDAAPGEPGPKGPKGPPGAPGAP 198
>L11247-3|AAA28008.1| 278|Caenorhabditis elegans Collagen protein
91 protein.
Length = 278
Score = 29.1 bits (62), Expect = 4.8
Identities = 20/69 (28%), Positives = 23/69 (33%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPGXEHAPQ 566
GP G G PG P P G A AG P P P PG + P
Sbjct: 140 GPAGAPGAPGPAGPDGQPGADGQGGAPGPAGPEGPAGDAGAPGAPGA-----PGNDGQPG 194
Query: 567 NRXAKTPGT 593
++ GT
Sbjct: 195 QNGQRSTGT 203
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 29.1 bits (62), Expect = 4.8
Identities = 22/82 (26%), Positives = 24/82 (29%), Gaps = 1/82 (1%)
Frame = +3
Query: 345 GTXAXXXSGNXPXXGPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPX 524
G G GP G GPPG + P G G P P P P P
Sbjct: 242 GRPGKNAQGGSSRPGPPGPAGPPGPPGNNGAP---GGGYGVGPPGPPGPSGRPGAPGQPG 298
Query: 525 KXXVXN-PGXEHAPQNRXAKTP 587
PG + P A P
Sbjct: 299 PDGQPGAPGNDGTPGTDAAYCP 320
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXP 491
G G GPPG P P G A +AG P P
Sbjct: 238 GAPGNDGPPGPPGPKGSPGPDGPAGVDGQAGPPGP 272
>Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.5 protein.
Length = 316
Score = 28.7 bits (61), Expect = 6.3
Identities = 20/68 (29%), Positives = 24/68 (35%), Gaps = 1/68 (1%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXN-PGXEHAP 563
G G G PG P P + G A AG P P P P + PG + P
Sbjct: 204 GLPGPSGAPGPQGPPGAPGQPGSGNAPGPAGPPGPAGPNGQPGHPGQDGQPGAPGNDGTP 263
Query: 564 QNRXAKTP 587
+ A P
Sbjct: 264 GSDAAYCP 271
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 28.7 bits (61), Expect = 6.3
Identities = 19/73 (26%), Positives = 22/73 (30%), Gaps = 1/73 (1%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXN-PGXEHAP 563
G G G PG P P G + G P P +P P PG P
Sbjct: 155 GAPGAPGKPGSEGPPGPPGHDGPNGGPGQPGQPGPHGPNGHPGKPGSQGPPGPPGHSDEP 214
Query: 564 QNRXAKTPGTXKP 602
+ PG P
Sbjct: 215 KPGQPGQPGRAGP 227
>U42437-5|AAA83499.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 13 protein.
Length = 302
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/51 (31%), Positives = 19/51 (37%)
Frame = -1
Query: 520 GXGG*XGXCWGXGXPASRXAGAXPWRQGXXXGEXSPGGPXSPXGPXXGXLP 368
G G G G P + A P QG +PG P +P P LP
Sbjct: 160 GLPGDQGDKGEAGQPGQPGSDAAPGEQGPKGPNGAPGKPGAPGAPGDEGLP 210
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/56 (28%), Positives = 20/56 (35%), Gaps = 1/56 (1%)
Frame = +2
Query: 443 TPRXRPXXPXSGXAXXPAXPPL-PAXPXKXXRX*PRXXTCPPKPPXXNXXNPXTRP 607
TP +P P + P P+ P P + P CPP PP P P
Sbjct: 32 TPMCQPRMPCAAPMPMPMPMPVCPPPPPCPAQFCPPPPICPPPPPPPMPCPPPPPP 87
>U23520-6|AAC46553.1| 287|Caenorhabditis elegans Collagen protein
175 protein.
Length = 287
Score = 28.7 bits (61), Expect = 6.3
Identities = 24/69 (34%), Positives = 24/69 (34%), Gaps = 1/69 (1%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPGXEHAP- 563
GP G GPPG P R G EAG P P P P PG P
Sbjct: 151 GPRGDAGPPG---PPGNGGRPGQRGTPGEAGTPGPVGEPGETGGPGPQ--GRPGQRGEPG 205
Query: 564 QNRXAKTPG 590
Q TPG
Sbjct: 206 QPGTVHTPG 214
>M23559-1|AAA27994.1| 302|Caenorhabditis elegans protein (
C.elegans collagen (dpy-13) gene, complete cds. ).
Length = 302
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/51 (31%), Positives = 19/51 (37%)
Frame = -1
Query: 520 GXGG*XGXCWGXGXPASRXAGAXPWRQGXXXGEXSPGGPXSPXGPXXGXLP 368
G G G G P + A P QG +PG P +P P LP
Sbjct: 160 GLPGDQGDKGEAGQPGQPGSDAAPGEQGPKGPNGAPGKPGAPGAPGDEGLP 210
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/41 (34%), Positives = 16/41 (39%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXY 509
GP G GPPG P G A + G P P P +
Sbjct: 205 GPSGRPGPPGPAGGPGQPGHSGGAGSPGPQGPPGPSGQPGH 245
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 28.3 bits (60), Expect = 8.3
Identities = 18/49 (36%), Positives = 18/49 (36%), Gaps = 2/49 (4%)
Frame = +3
Query: 387 GPXGXXGPPGL--XSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXK 527
GP G GPPG SP P G AG P P P P K
Sbjct: 229 GPPGPAGPPGPDGASPTAAPGAAGPPGPPGPAGAPGPDGNPGTAGPPGK 277
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical
protein F12F6.6 protein.
Length = 1126
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = +3
Query: 450 GXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPGXEHAPQ 566
G +P+ +AG P Q YP P PG PQ
Sbjct: 181 GGSPSSFQAGAPTSQNVQGYPGGPSSAPSAYPGAPQVPQ 219
>Z71258-1|CAA95780.1| 307|Caenorhabditis elegans Hypothetical
protein C01H6.1 protein.
Length = 307
Score = 28.3 bits (60), Expect = 8.3
Identities = 17/59 (28%), Positives = 19/59 (32%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPGXEHAP 563
GP G G PG P R G + G P P P K + PG P
Sbjct: 167 GPNGKPGNPGYRGEDGKPGRPGEPGSSGLPGRPGSDGKPGLPGRDGKKGIGLPGRMGRP 225
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 28.3 bits (60), Expect = 8.3
Identities = 18/49 (36%), Positives = 18/49 (36%), Gaps = 2/49 (4%)
Frame = +3
Query: 387 GPXGXXGPPGL--XSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXK 527
GP G GPPG SP P G AG P P P P K
Sbjct: 228 GPPGPAGPPGPDGASPTAAPGAAGPPGPPGPAGAPGPDGNPGTAGPPGK 276
>Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical
protein ZC373.7 protein.
Length = 297
Score = 28.3 bits (60), Expect = 8.3
Identities = 18/66 (27%), Positives = 21/66 (31%)
Frame = +3
Query: 366 SGNXPXXGPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNP 545
+G+ GP G G PG P G + G P P P P K
Sbjct: 157 AGSAGPAGPKGPDGRPGQPGSAGHPGAPGQPGSKGNNGAPGAAGGPGQPGRPGKDGQRGK 216
Query: 546 GXEHAP 563
G AP
Sbjct: 217 GSAGAP 222
Score = 28.3 bits (60), Expect = 8.3
Identities = 19/69 (27%), Positives = 22/69 (31%), Gaps = 1/69 (1%)
Frame = -1
Query: 589 PGVXAWRFWGACSXPGLXTXXFX-GXGG*XGXCWGXGXPASRXAGAXPWRQGXXXGEXSP 413
PG R G+ PG G G G G P P G + P
Sbjct: 208 PGKDGQRGKGSAGAPGAPGKAGPAGPAGGPGNNGSAGTPGPAGPAGNPGTPGNKGSDGHP 267
Query: 412 GGPXSPXGP 386
G P +P GP
Sbjct: 268 GTPGAPGGP 276
>U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protein
111 protein.
Length = 332
Score = 28.3 bits (60), Expect = 8.3
Identities = 25/82 (30%), Positives = 26/82 (31%), Gaps = 4/82 (4%)
Frame = +3
Query: 369 GNXPXXGPXGXXGPPGLXSPHXXP*RHG--XAPAXR-EAGXPXPQXXPXYPPXPXKXXVX 539
GN GP G G PG P HG P R + G P P P P V
Sbjct: 175 GNMGRPGPPGPAGDPGQAGSKGAPGTHGRQGMPGVRYQLGEPGPAGYPG--PRGAPGPVG 232
Query: 540 NPG-XEHAPQNRXAKTPGTXKP 602
PG E P KP
Sbjct: 233 PPGVAEEGPDGLPGPAGPPGKP 254
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 28.3 bits (60), Expect = 8.3
Identities = 20/72 (27%), Positives = 24/72 (33%)
Frame = +3
Query: 387 GPXGXXGPPGLXSPHXXP*RHGXAPAXREAGXPXPQXXPXYPPXPXKXXVXNPGXEHAPQ 566
GP G G PG + P G EAG P P P P + PG + +
Sbjct: 159 GPPGPPGAPGDAGTNGAPGAPGGDAPPGEAGPKGPPGPPGSPGAPGEP--GRPGDDAPSE 216
Query: 567 NRXAKTPGTXKP 602
PG P
Sbjct: 217 PLIPGEPGPQGP 228
>AC024805-16|AAK39336.1| 448|Caenorhabditis elegans Hypothetical
protein Y51H7C.1 protein.
Length = 448
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = -1
Query: 484 GXPASRXAGAXPWRQGXXXGEXSPGGPXSPXGP 386
G P + P G G +PGGP +P GP
Sbjct: 37 GGPGTPGGPGTPGGPGTPGGLGTPGGPGTPGGP 69
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,932,689
Number of Sequences: 27780
Number of extensions: 89921
Number of successful extensions: 1709
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1446
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2412704140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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