Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_P06
(912 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 36 0.011
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 34 0.032
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 26 0.042
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 33 0.043
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 33 0.056
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 31 0.17
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 0.69
SPBC3B9.07c |rpa43|rpa21|DNA-directed RNA polymerase I complex s... 29 0.69
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 28 1.6
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 28 1.6
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 28 1.6
SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr 1|... 28 2.1
SPBC1215.02c |arm1|mdm20|NatB N-acetyltransferase complex non ca... 27 3.7
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 27 4.9
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 26 6.5
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 35.5 bits (78), Expect = 0.011
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = +3
Query: 765 PLXXXPXXXXXPPPXPPPHXXXXXXPPPPXPPXLPXXPXXPXPXXHP 905
P P P P PPP PPPP PP + P P P
Sbjct: 737 PAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 32.3 bits (70), Expect = 0.098
Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 5/28 (17%)
Frame = +2
Query: 752 PXRXXPPXXPPXPX-----PPPPPPXPP 820
P PP PP P PPPPPP PP
Sbjct: 756 PIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 29.1 bits (62), Expect = 0.92
Identities = 14/52 (26%), Positives = 16/52 (30%)
Frame = +1
Query: 751 PPPXXPSXLPPXXXXXPPPXXPPTXXXXXXRXXXXXXXXXXXXPXPPPXXTP 906
PPP P+ + P P P PP P PPP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 29.1 bits (62), Expect = 0.92
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 749 PPXRXXPPXXPPXPXPPPPPPXP 817
PP PP PPPPPP P
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPP 783
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/37 (37%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Frame = +3
Query: 798 PPPXPPPHXXXXXXPPP-PXPPXLPXXPXXPXPXXHP 905
PPP PP P P P PP P P P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 28.7 bits (61), Expect = 1.2
Identities = 18/70 (25%), Positives = 23/70 (32%)
Frame = +3
Query: 426 PPXPPXXXTRQXXAXPXAXXXPXXLXSXXFPPPLXXGXKTPLXPXSXPPXXSXRPPSXSP 605
PP PP P P + PPP G P PP PP+ S
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP-----PPAVSA 787
Query: 606 AXXQHXSPXP 635
++ +P P
Sbjct: 788 GGSRYYAPAP 797
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 33.9 bits (74), Expect = 0.032
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +3
Query: 798 PPPXPPPHXXXXXXPPPPXPP 860
PPP PPP PPPP PP
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPP 30
Score = 33.5 bits (73), Expect = 0.043
Identities = 14/26 (53%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Frame = +2
Query: 749 PPXRXXPPXXPPXPXPP--PPPPXPP 820
PP PP PP PP PPPP PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 30.7 bits (66), Expect = 0.30
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 798 PPPXPPPHXXXXXXPPPPXPP 860
PPP PPP PPP PP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPP 29
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 26.2 bits (55), Expect(2) = 0.042
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2
Query: 794 PPPPPPXPP 820
PPPPPP PP
Sbjct: 945 PPPPPPPPP 953
Score = 25.8 bits (54), Expect(2) = 0.042
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 788 PXPPPPPPXP 817
P PPPPPP P
Sbjct: 905 PTPPPPPPLP 914
Score = 24.2 bits (50), Expect(2) = 2.0
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +2
Query: 788 PXPPPPPPXPP 820
P PPPPP PP
Sbjct: 942 PAFPPPPPPPP 952
Score = 21.8 bits (44), Expect(2) = 2.0
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2
Query: 782 PXPXPPPPPP 811
P P PPPP P
Sbjct: 905 PTPPPPPPLP 914
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 33.5 bits (73), Expect = 0.043
Identities = 17/48 (35%), Positives = 18/48 (37%)
Frame = +3
Query: 762 RPLXXXPXXXXXPPPXPPPHXXXXXXPPPPXPPXLPXXPXXPXPXXHP 905
RP P P P PPP PPPP P +P P P P
Sbjct: 1693 RPQSAAPPQMSAPTPPPPP----MSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 29.9 bits (64), Expect = 0.52
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 740 SXXPPXRXXPPXXPPXPXPPPPPPXPP 820
S PP P PP PPPP PP
Sbjct: 1696 SAAPPQMSAPTPPPPPMSVPPPPSAPP 1722
Score = 28.3 bits (60), Expect = 1.6
Identities = 12/25 (48%), Positives = 12/25 (48%), Gaps = 1/25 (4%)
Frame = +2
Query: 749 PPXRXX-PPXXPPXPXPPPPPPXPP 820
PP PP PP P PP P PP
Sbjct: 1710 PPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 26.2 bits (55), Expect = 6.5
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +2
Query: 749 PPXRXXPPXXPPXPXPPPPPPXPP 820
PP PP P P PP PP
Sbjct: 1709 PPPMSVPPPPSAPPMPAGPPSAPP 1732
Score = 25.8 bits (54), Expect = 8.5
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 749 PPXRXXPPXXPPXPXPPPPPPXP 817
PP PP P P PPPP P
Sbjct: 1715 PPPPSAPPM-PAGPPSAPPPPLP 1736
Score = 25.8 bits (54), Expect = 8.5
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +2
Query: 749 PPXRXXPPXXPPXPXPPPPPPXPP 820
PP PP PP P P P P
Sbjct: 1721 PPMPAGPPSAPPPPLPASSAPSVP 1744
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 33.1 bits (72), Expect = 0.056
Identities = 22/58 (37%), Positives = 22/58 (37%)
Frame = -3
Query: 892 GXGXXGXXGRXGGXGGGGXXXXXXWGGGXGGGXXXXXGXXXRGRAXGGXXRXXRRRGG 719
G G G GG GG G GGG GG G RG A GG RGG
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRGGA---RGGRGGRGGARGGRGGSSGGRGG 66
Score = 28.7 bits (61), Expect = 1.2
Identities = 17/52 (32%), Positives = 18/52 (34%)
Frame = -3
Query: 886 GXXGXXGRXGGXGGGGXXXXXXWGGGXGGGXXXXXGXXXRGRAXGGXXRXXR 731
G G G G GG +GGG GG G GR G R R
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGR 57
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 31.5 bits (68), Expect = 0.17
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = -3
Query: 886 GXXGXXGRXGGXGGGGXXXXXXWGGGXGGGXXXXXGXXXRGRAXGG 749
G G G GG GG GG GGG G RG + GG
Sbjct: 136 GRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGG 181
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 29.5 bits (63), Expect = 0.69
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 740 SXXPPXRXXPPXXPPXPXPPPPPPXPP 820
S PP P P PPPPP PP
Sbjct: 170 SFQPPSAAAPATSLPSDYNPPPPPPPP 196
Score = 29.1 bits (62), Expect = 0.92
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 798 PPPXPPPHXXXXXXPPPPXPPXLP 869
PP P PPPP PP LP
Sbjct: 224 PPTYTPKQADPLPAPPPPPPPTLP 247
Score = 28.3 bits (60), Expect = 1.6
Identities = 12/25 (48%), Positives = 12/25 (48%), Gaps = 1/25 (4%)
Frame = +2
Query: 749 PPXRXXPPXXP-PXPXPPPPPPXPP 820
PP P P P PPPPP PP
Sbjct: 224 PPTYTPKQADPLPAPPPPPPPTLPP 248
>SPBC3B9.07c |rpa43|rpa21|DNA-directed RNA polymerase I complex
subunit Rpa43|Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 29.5 bits (63), Expect = 0.69
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = +1
Query: 19 PHYTGIP*DLSSIRARPAN*RI-YDRTFSMNWFYFSVFTFSEKKVTCLSSXLSI 177
P GI +IR + ++ YD FS W V FS KK CL +++
Sbjct: 42 PRINGIVLAYDNIRFLEKSAKVMYDSPFSFIWVRVDVLVFSPKKGDCLEGKINL 95
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 28.3 bits (60), Expect = 1.6
Identities = 21/73 (28%), Positives = 22/73 (30%)
Frame = +3
Query: 423 SPPXPPXXXTRQXXAXPXAXXXPXXLXSXXFPPPLXXGXKTPLXPXSXPPXXSXRPPSXS 602
+PP P T Q P P PPP P P PP S PP
Sbjct: 123 APPSAPAPPTPQSELRPPTSAPPRP----SIPPPSPAS--APPIPSKAPPIPSSLPPPAQ 176
Query: 603 PAXXQHXSPXPXS 641
PA P S
Sbjct: 177 PAAPVKSPPSAPS 189
Score = 25.8 bits (54), Expect = 8.5
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 788 PXPPPPPPXP 817
P PPPPPP P
Sbjct: 3 PAPPPPPPAP 12
Score = 25.8 bits (54), Expect = 8.5
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +2
Query: 767 PPXXPPXPXPPPPPPXPP 820
PP PP P P P PP
Sbjct: 5 PPPPPPAPAPAAAAPAPP 22
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 28.3 bits (60), Expect = 1.6
Identities = 12/35 (34%), Positives = 13/35 (37%)
Frame = +3
Query: 801 PPXPPPHXXXXXXPPPPXPPXLPXXPXXPXPXXHP 905
PP P P PP P +P P P P P
Sbjct: 577 PPVAPVAPEVPSVPQPPVAPVVPEAPSVPQPPVAP 611
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/69 (21%), Positives = 21/69 (30%)
Frame = +3
Query: 423 SPPXPPXXXTRQXXAXPXAXXXPXXLXSXXFPPPLXXGXKTPLXPXSXPPXXSXRPPSXS 602
+PP PP P + + PPP G P P + PP +
Sbjct: 360 APPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPT 419
Query: 603 PAXXQHXSP 629
P +P
Sbjct: 420 PPSLPPSAP 428
Score = 27.9 bits (59), Expect = 2.1
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +3
Query: 801 PPXPPPHXXXXXXPPPPXPPXLPXXPXXP 887
PP PP PP PP P P P
Sbjct: 432 PPSAPPSLPMGAPAAPPLPPSAPIAPPLP 460
Score = 26.2 bits (55), Expect = 6.5
Identities = 11/22 (50%), Positives = 11/22 (50%), Gaps = 2/22 (9%)
Frame = +3
Query: 798 PPPXPPPHXXXXXXPP--PPXP 857
PPP PPP PP PP P
Sbjct: 253 PPPIPPPSNGTVSSPPNSPPRP 274
Score = 25.8 bits (54), Expect = 8.5
Identities = 13/39 (33%), Positives = 13/39 (33%), Gaps = 1/39 (2%)
Frame = +3
Query: 780 PXXXXXPPPXP-PPHXXXXXXPPPPXPPXLPXXPXXPXP 893
P PP P P PP PP P P P P
Sbjct: 444 PAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAP 482
Score = 25.8 bits (54), Expect = 8.5
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +2
Query: 749 PPXRXXPPXXPPXPXPPPPPPXPP 820
PP P PP P P PP P
Sbjct: 457 PPLPAGMPAAPPLPPAAPAPPPAP 480
Score = 25.8 bits (54), Expect = 8.5
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +2
Query: 767 PPXXPPXPXPPPPPPXPP 820
PP P P PPP P P
Sbjct: 467 PPLPPAAPAPPPAPAPAP 484
>SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1372
Score = 27.9 bits (59), Expect = 2.1
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2
Query: 779 PPXPXPPPPPPXP 817
PP P PPP PP P
Sbjct: 807 PPAPLPPPAPPLP 819
>SPBC1215.02c |arm1|mdm20|NatB N-acetyltransferase complex non
catalytic subunit Arm1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 811
Score = 27.1 bits (57), Expect = 3.7
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -3
Query: 154 KSLSFH*M*TLKNKTNSSRKSDRKYVS*RDGRGWNSNLKE 35
K++S + + ++ T +K+ RKYVS W SNL E
Sbjct: 735 KNISSNKLGSISGITKHKKKAARKYVSELLSNSWLSNLSE 774
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 26.6 bits (56), Expect = 4.9
Identities = 19/70 (27%), Positives = 23/70 (32%)
Frame = +3
Query: 426 PPXPPXXXTRQXXAXPXAXXXPXXLXSXXFPPPLXXGXKTPLXPXSXPPXXSXRPPSXSP 605
PP P P A P + S PP+ TP P S S PP +P
Sbjct: 1012 PPVPKLSSKAPPVPLPSADAPPIPVPSTA--PPVPIPTSTPPVPKSSSGAPSAPPPVPAP 1069
Query: 606 AXXQHXSPXP 635
+ P P
Sbjct: 1070 SSEIPSIPAP 1079
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 26.2 bits (55), Expect = 6.5
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2
Query: 794 PPPPPPXPP 820
PPPPPP PP
Sbjct: 306 PPPPPPPPP 314
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,971,292
Number of Sequences: 5004
Number of extensions: 31405
Number of successful extensions: 479
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 306
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 462505890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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