Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_P04
(891 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X54473-1|CAA38352.1| 86|Homo sapiens cytochrome oxidase subuni... 91 4e-18
X13923-1|CAA32114.1| 86|Homo sapiens protein ( Human mRNA for ... 91 4e-18
CR542137-1|CAG46934.1| 86|Homo sapiens COX6B protein. 91 4e-18
CR456789-1|CAG33070.1| 86|Homo sapiens COX6B protein. 91 4e-18
BT006945-1|AAP35591.1| 86|Homo sapiens cytochrome c oxidase su... 91 4e-18
BC002478-1|AAH02478.1| 86|Homo sapiens cytochrome c oxidase su... 91 4e-18
BC001015-1|AAH01015.1| 86|Homo sapiens cytochrome c oxidase su... 91 4e-18
AC002115-3|AAB57628.1| 86|Homo sapiens COXG protein. 91 4e-18
BC100902-1|AAI00903.1| 88|Homo sapiens COX6B2 protein protein. 83 1e-15
BC100901-1|AAI00902.1| 88|Homo sapiens cytochrome c oxidase su... 83 1e-15
BC100900-1|AAI00901.1| 88|Homo sapiens cytochrome c oxidase su... 83 1e-15
BC100899-1|AAI00900.1| 88|Homo sapiens cytochrome c oxidase su... 83 1e-15
BC064548-1|AAH64548.1| 88|Homo sapiens cytochrome c oxidase su... 83 1e-15
BC026123-1|AAH26123.3| 88|Homo sapiens cytochrome c oxidase su... 83 1e-15
AY152398-1|AAN46751.1| 88|Homo sapiens cytochrome c oxidase su... 83 1e-15
AL031594-1|CAI21907.1| 108|Homo sapiens protein ( Human DNA seq... 64 7e-10
>X54473-1|CAA38352.1| 86|Homo sapiens cytochrome oxidase subunit
VIb protein.
Length = 86
Score = 91.5 bits (217), Expect = 4e-18
Identities = 40/74 (54%), Positives = 49/74 (66%), Gaps = 3/74 (4%)
Frame = -3
Query: 409 KTAPFDPRFPNXNQTRHXYQSYVDFHRCQK---VXGEKYEPXYYFKRVYRXXCPXEWVDK 239
KTAPFD RFPN NQTR+ +Q+Y+DFHRCQK G +++RVY+ CP WV
Sbjct: 13 KTAPFDSRFPNQNQTRNCWQNYLDFHRCQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTD 72
Query: 238 WDNQXAEGTXAGRI 197
WD Q AEGT G+I
Sbjct: 73 WDEQRAEGTFPGKI 86
>X13923-1|CAA32114.1| 86|Homo sapiens protein ( Human mRNA for
cytochrome c oxidase subunit VIb (EC 1.9.3.1). ).
Length = 86
Score = 91.5 bits (217), Expect = 4e-18
Identities = 40/74 (54%), Positives = 49/74 (66%), Gaps = 3/74 (4%)
Frame = -3
Query: 409 KTAPFDPRFPNXNQTRHXYQSYVDFHRCQK---VXGEKYEPXYYFKRVYRXXCPXEWVDK 239
KTAPFD RFPN NQTR+ +Q+Y+DFHRCQK G +++RVY+ CP WV
Sbjct: 13 KTAPFDSRFPNQNQTRNCWQNYLDFHRCQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTD 72
Query: 238 WDNQXAEGTXAGRI 197
WD Q AEGT G+I
Sbjct: 73 WDEQRAEGTFPGKI 86
>CR542137-1|CAG46934.1| 86|Homo sapiens COX6B protein.
Length = 86
Score = 91.5 bits (217), Expect = 4e-18
Identities = 40/74 (54%), Positives = 49/74 (66%), Gaps = 3/74 (4%)
Frame = -3
Query: 409 KTAPFDPRFPNXNQTRHXYQSYVDFHRCQK---VXGEKYEPXYYFKRVYRXXCPXEWVDK 239
KTAPFD RFPN NQTR+ +Q+Y+DFHRCQK G +++RVY+ CP WV
Sbjct: 13 KTAPFDSRFPNQNQTRNCWQNYLDFHRCQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTD 72
Query: 238 WDNQXAEGTXAGRI 197
WD Q AEGT G+I
Sbjct: 73 WDEQRAEGTFPGKI 86
>CR456789-1|CAG33070.1| 86|Homo sapiens COX6B protein.
Length = 86
Score = 91.5 bits (217), Expect = 4e-18
Identities = 40/74 (54%), Positives = 49/74 (66%), Gaps = 3/74 (4%)
Frame = -3
Query: 409 KTAPFDPRFPNXNQTRHXYQSYVDFHRCQK---VXGEKYEPXYYFKRVYRXXCPXEWVDK 239
KTAPFD RFPN NQTR+ +Q+Y+DFHRCQK G +++RVY+ CP WV
Sbjct: 13 KTAPFDSRFPNQNQTRNCWQNYLDFHRCQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTD 72
Query: 238 WDNQXAEGTXAGRI 197
WD Q AEGT G+I
Sbjct: 73 WDEQRAEGTFPGKI 86
>BT006945-1|AAP35591.1| 86|Homo sapiens cytochrome c oxidase
subunit VIb protein.
Length = 86
Score = 91.5 bits (217), Expect = 4e-18
Identities = 40/74 (54%), Positives = 49/74 (66%), Gaps = 3/74 (4%)
Frame = -3
Query: 409 KTAPFDPRFPNXNQTRHXYQSYVDFHRCQK---VXGEKYEPXYYFKRVYRXXCPXEWVDK 239
KTAPFD RFPN NQTR+ +Q+Y+DFHRCQK G +++RVY+ CP WV
Sbjct: 13 KTAPFDSRFPNQNQTRNCWQNYLDFHRCQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTD 72
Query: 238 WDNQXAEGTXAGRI 197
WD Q AEGT G+I
Sbjct: 73 WDEQRAEGTFPGKI 86
>BC002478-1|AAH02478.1| 86|Homo sapiens cytochrome c oxidase
subunit Vib polypeptide 1 (ubiquitous) protein.
Length = 86
Score = 91.5 bits (217), Expect = 4e-18
Identities = 40/74 (54%), Positives = 49/74 (66%), Gaps = 3/74 (4%)
Frame = -3
Query: 409 KTAPFDPRFPNXNQTRHXYQSYVDFHRCQK---VXGEKYEPXYYFKRVYRXXCPXEWVDK 239
KTAPFD RFPN NQTR+ +Q+Y+DFHRCQK G +++RVY+ CP WV
Sbjct: 13 KTAPFDSRFPNQNQTRNCWQNYLDFHRCQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTD 72
Query: 238 WDNQXAEGTXAGRI 197
WD Q AEGT G+I
Sbjct: 73 WDEQRAEGTFPGKI 86
>BC001015-1|AAH01015.1| 86|Homo sapiens cytochrome c oxidase
subunit Vib polypeptide 1 (ubiquitous) protein.
Length = 86
Score = 91.5 bits (217), Expect = 4e-18
Identities = 40/74 (54%), Positives = 49/74 (66%), Gaps = 3/74 (4%)
Frame = -3
Query: 409 KTAPFDPRFPNXNQTRHXYQSYVDFHRCQK---VXGEKYEPXYYFKRVYRXXCPXEWVDK 239
KTAPFD RFPN NQTR+ +Q+Y+DFHRCQK G +++RVY+ CP WV
Sbjct: 13 KTAPFDSRFPNQNQTRNCWQNYLDFHRCQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTD 72
Query: 238 WDNQXAEGTXAGRI 197
WD Q AEGT G+I
Sbjct: 73 WDEQRAEGTFPGKI 86
>AC002115-3|AAB57628.1| 86|Homo sapiens COXG protein.
Length = 86
Score = 91.5 bits (217), Expect = 4e-18
Identities = 40/74 (54%), Positives = 49/74 (66%), Gaps = 3/74 (4%)
Frame = -3
Query: 409 KTAPFDPRFPNXNQTRHXYQSYVDFHRCQK---VXGEKYEPXYYFKRVYRXXCPXEWVDK 239
KTAPFD RFPN NQTR+ +Q+Y+DFHRCQK G +++RVY+ CP WV
Sbjct: 13 KTAPFDSRFPNQNQTRNCWQNYLDFHRCQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTD 72
Query: 238 WDNQXAEGTXAGRI 197
WD Q AEGT G+I
Sbjct: 73 WDEQRAEGTFPGKI 86
>BC100902-1|AAI00903.1| 88|Homo sapiens COX6B2 protein protein.
Length = 88
Score = 83.4 bits (197), Expect = 1e-15
Identities = 34/73 (46%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Frame = -3
Query: 406 TAPFDPRFPNXNQTRHXYQSYVDFHRCQKV---XGEKYEPXYYFKRVYRXXCPXEWVDKW 236
T PFDPRFP+ NQ R+ YQ+++D+HRC K G+ +P Y+ RVY CP WV+ W
Sbjct: 16 TPPFDPRFPSQNQIRNCYQNFLDYHRCLKTRTRRGKSTQPCEYYFRVYHSLCPISWVESW 75
Query: 235 DNQXAEGTXAGRI 197
+ Q G AG+I
Sbjct: 76 NEQIKNGIFAGKI 88
>BC100901-1|AAI00902.1| 88|Homo sapiens cytochrome c oxidase
subunit VIb polypeptide 2 (testis) protein.
Length = 88
Score = 83.4 bits (197), Expect = 1e-15
Identities = 34/73 (46%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Frame = -3
Query: 406 TAPFDPRFPNXNQTRHXYQSYVDFHRCQKV---XGEKYEPXYYFKRVYRXXCPXEWVDKW 236
T PFDPRFP+ NQ R+ YQ+++D+HRC K G+ +P Y+ RVY CP WV+ W
Sbjct: 16 TPPFDPRFPSQNQIRNCYQNFLDYHRCLKTRTRRGKSTQPCEYYFRVYHSLCPISWVESW 75
Query: 235 DNQXAEGTXAGRI 197
+ Q G AG+I
Sbjct: 76 NEQIKNGIFAGKI 88
>BC100900-1|AAI00901.1| 88|Homo sapiens cytochrome c oxidase
subunit VIb polypeptide 2 (testis) protein.
Length = 88
Score = 83.4 bits (197), Expect = 1e-15
Identities = 34/73 (46%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Frame = -3
Query: 406 TAPFDPRFPNXNQTRHXYQSYVDFHRCQKV---XGEKYEPXYYFKRVYRXXCPXEWVDKW 236
T PFDPRFP+ NQ R+ YQ+++D+HRC K G+ +P Y+ RVY CP WV+ W
Sbjct: 16 TPPFDPRFPSQNQIRNCYQNFLDYHRCLKTRTRRGKSTQPCEYYFRVYHSLCPISWVESW 75
Query: 235 DNQXAEGTXAGRI 197
+ Q G AG+I
Sbjct: 76 NEQIKNGIFAGKI 88
>BC100899-1|AAI00900.1| 88|Homo sapiens cytochrome c oxidase
subunit VIb polypeptide 2 (testis) protein.
Length = 88
Score = 83.4 bits (197), Expect = 1e-15
Identities = 34/73 (46%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Frame = -3
Query: 406 TAPFDPRFPNXNQTRHXYQSYVDFHRCQKV---XGEKYEPXYYFKRVYRXXCPXEWVDKW 236
T PFDPRFP+ NQ R+ YQ+++D+HRC K G+ +P Y+ RVY CP WV+ W
Sbjct: 16 TPPFDPRFPSQNQIRNCYQNFLDYHRCLKTRTRRGKSTQPCEYYFRVYHSLCPISWVESW 75
Query: 235 DNQXAEGTXAGRI 197
+ Q G AG+I
Sbjct: 76 NEQIKNGIFAGKI 88
>BC064548-1|AAH64548.1| 88|Homo sapiens cytochrome c oxidase
subunit VIb polypeptide 2 (testis) protein.
Length = 88
Score = 83.4 bits (197), Expect = 1e-15
Identities = 34/73 (46%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Frame = -3
Query: 406 TAPFDPRFPNXNQTRHXYQSYVDFHRCQKV---XGEKYEPXYYFKRVYRXXCPXEWVDKW 236
T PFDPRFP+ NQ R+ YQ+++D+HRC K G+ +P Y+ RVY CP WV+ W
Sbjct: 16 TPPFDPRFPSQNQIRNCYQNFLDYHRCLKTRTRRGKSTQPCEYYFRVYHSLCPISWVESW 75
Query: 235 DNQXAEGTXAGRI 197
+ Q G AG+I
Sbjct: 76 NEQIKNGIFAGKI 88
>BC026123-1|AAH26123.3| 88|Homo sapiens cytochrome c oxidase
subunit VIb polypeptide 2 (testis) protein.
Length = 88
Score = 83.4 bits (197), Expect = 1e-15
Identities = 34/73 (46%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Frame = -3
Query: 406 TAPFDPRFPNXNQTRHXYQSYVDFHRCQKV---XGEKYEPXYYFKRVYRXXCPXEWVDKW 236
T PFDPRFP+ NQ R+ YQ+++D+HRC K G+ +P Y+ RVY CP WV+ W
Sbjct: 16 TPPFDPRFPSQNQIRNCYQNFLDYHRCLKTRTRRGKSTQPCEYYFRVYHSLCPISWVESW 75
Query: 235 DNQXAEGTXAGRI 197
+ Q G AG+I
Sbjct: 76 NEQIKNGIFAGKI 88
>AY152398-1|AAN46751.1| 88|Homo sapiens cytochrome c oxidase
subunit VIb testes-specific isoform precursor protein.
Length = 88
Score = 83.4 bits (197), Expect = 1e-15
Identities = 34/73 (46%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Frame = -3
Query: 406 TAPFDPRFPNXNQTRHXYQSYVDFHRCQKV---XGEKYEPXYYFKRVYRXXCPXEWVDKW 236
T PFDPRFP+ NQ R+ YQ+++D+HRC K G+ +P Y+ RVY CP WV+ W
Sbjct: 16 TPPFDPRFPSQNQIRNCYQNFLDYHRCLKTRTRRGKSTQPCEYYFRVYHSLCPISWVESW 75
Query: 235 DNQXAEGTXAGRI 197
+ Q G AG+I
Sbjct: 76 NEQIKNGIFAGKI 88
>AL031594-1|CAI21907.1| 108|Homo sapiens protein ( Human DNA
sequence from clone RP4-591N18 on chromosome
22q13.1-13.2.33 Contains the C22orf34 gene for
chromosome 22 open reading frame 34. ).
Length = 108
Score = 64.1 bits (149), Expect = 7e-10
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Frame = -3
Query: 409 KTAPFDPRFPNXNQTRHXYQSYVDFHRCQKV----XGEKYEPXYYFKRVYRXXCPXEWVD 242
+TAPFD RFPN NQTR+ +Q Y+D H +K G +++ VY+ CP W
Sbjct: 13 RTAPFDRRFPNQNQTRNGWQKYLDLHHFKKAMTAKGGGDVSVCEWYQHVYKSLCPIPWAS 72
Query: 241 KWDNQXAEGTXAGR 200
WD+ + GR
Sbjct: 73 AWDDHGQKAHFLGR 86
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,219,815
Number of Sequences: 237096
Number of extensions: 1612854
Number of successful extensions: 1969
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1953
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11437206932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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