Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_P04
         (891 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-2928|AAN09514.1|   77|Drosophila melanogaster CG14235-P...   112   7e-25
AE014298-2927|AAN09513.1|   77|Drosophila melanogaster CG14235-P...   112   7e-25
AE014298-2926|AAF49015.2|   96|Drosophila melanogaster CG14235-P...   112   7e-25
AE014134-2820|ABI31319.1|  122|Drosophila melanogaster CG34106-P...    29   8.6  

>AE014298-2928|AAN09514.1|   77|Drosophila melanogaster CG14235-PC,
           isoform C protein.
          Length = 77

 Score =  112 bits (269), Expect = 7e-25
 Identities = 45/72 (62%), Positives = 54/72 (75%)
 Frame = -3

Query: 412 LKTAPFDPRFPNXNQTRHXYQSYVDFHRCQKVXGEKYEPXYYFKRVYRXXCPXEWVDKWD 233
           L+TAPFDPRFPN N TR+ YQSY+DFHRCQK  GE + P  YF++VY+  CP  WV+KWD
Sbjct: 6   LETAPFDPRFPNQNVTRYCYQSYIDFHRCQKKRGEDFAPCNYFQKVYKSMCPNAWVEKWD 65

Query: 232 NQXAEGTXAGRI 197
           +Q   GT  GRI
Sbjct: 66  DQRESGTFPGRI 77


>AE014298-2927|AAN09513.1|   77|Drosophila melanogaster CG14235-PB,
           isoform B protein.
          Length = 77

 Score =  112 bits (269), Expect = 7e-25
 Identities = 45/72 (62%), Positives = 54/72 (75%)
 Frame = -3

Query: 412 LKTAPFDPRFPNXNQTRHXYQSYVDFHRCQKVXGEKYEPXYYFKRVYRXXCPXEWVDKWD 233
           L+TAPFDPRFPN N TR+ YQSY+DFHRCQK  GE + P  YF++VY+  CP  WV+KWD
Sbjct: 6   LETAPFDPRFPNQNVTRYCYQSYIDFHRCQKKRGEDFAPCNYFQKVYKSMCPNAWVEKWD 65

Query: 232 NQXAEGTXAGRI 197
           +Q   GT  GRI
Sbjct: 66  DQRESGTFPGRI 77


>AE014298-2926|AAF49015.2|   96|Drosophila melanogaster CG14235-PA,
           isoform A protein.
          Length = 96

 Score =  112 bits (269), Expect = 7e-25
 Identities = 45/72 (62%), Positives = 54/72 (75%)
 Frame = -3

Query: 412 LKTAPFDPRFPNXNQTRHXYQSYVDFHRCQKVXGEKYEPXYYFKRVYRXXCPXEWVDKWD 233
           L+TAPFDPRFPN N TR+ YQSY+DFHRCQK  GE + P  YF++VY+  CP  WV+KWD
Sbjct: 25  LETAPFDPRFPNQNVTRYCYQSYIDFHRCQKKRGEDFAPCNYFQKVYKSMCPNAWVEKWD 84

Query: 232 NQXAEGTXAGRI 197
           +Q   GT  GRI
Sbjct: 85  DQRESGTFPGRI 96


>AE014134-2820|ABI31319.1|  122|Drosophila melanogaster CG34106-PA
           protein.
          Length = 122

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +1

Query: 157 NRNKLKHRERLGSKSYRXRCLRRXGCP 237
           NRN+LK   R+ +KSY+ R  RR   P
Sbjct: 67  NRNRLKEEHRVNTKSYKRRERRRSHRP 93


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,835,495
Number of Sequences: 53049
Number of extensions: 499738
Number of successful extensions: 725
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 725
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4352837424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)