Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_O21
         (929 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po...    28   2.2  
SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual         27   2.8  
SPBC20F10.08c |||conserved eukaryotic protein|Schizosaccharomyce...    27   5.0  
SPBPB2B2.13 |||galactokinase Gal1 |Schizosaccharomyces pombe|chr...    27   5.0  
SPBC2D10.14c |myo51||myosin type V|Schizosaccharomyces pombe|chr...    27   5.0  
SPCC70.09c |mug9||conserved fungal protein|Schizosaccharomyces p...    26   8.7  

>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 492

 Score = 27.9 bits (59), Expect = 2.2
 Identities = 14/40 (35%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
 Frame = +2

Query: 173 TEENVLVLSKANFETVI-STTEYILVEFLWLHGCGHWQSL 289
           ++E+++VL   NF+ ++   T+ +LVEF +   CGH ++L
Sbjct: 353 SQEDLVVLVADNFDDIVMDETKDVLVEF-YAPWCGHCKNL 391


>SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 503

 Score = 27.5 bits (58), Expect = 2.8
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = -3

Query: 387 FLELAFNFSLSLNREILSFSPALGAALGVFPAPRDCQCPHPW 262
           FL L  +F++  + ++ S+ P +GA  G FP P D     PW
Sbjct: 439 FLTLK-SFNVIGSMQLRSWGPIIGAWFGAFPIPLDWD--RPW 477


>SPBC20F10.08c |||conserved eukaryotic protein|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 747

 Score = 26.6 bits (56), Expect = 5.0
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = -2

Query: 115 NTHCDIIATFLL 80
           NTHCDI+ +FLL
Sbjct: 275 NTHCDIVTSFLL 286


>SPBPB2B2.13 |||galactokinase Gal1 |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 519

 Score = 26.6 bits (56), Expect = 5.0
 Identities = 21/87 (24%), Positives = 35/87 (40%)
 Frame = +2

Query: 116 LIFTGYSPG*GSLSEMXVATEENVLVLSKANFETVISTTEYILVEFLWLHGCGHWQSLGA 295
           LIF G  P  G LS        ++L + KAN    I+  + + +  +      H+  +  
Sbjct: 150 LIFDGNVPTGGGLSSSAAFCVASILAILKANGINTITKEDLVKISVV----SEHYVGVNT 205

Query: 296 GNTPKAAPKAGLKERISLFKLSEKLNA 376
           G   + A   G + +  L +   KL A
Sbjct: 206 GGMDQCASIYGEQNKALLVQFKPKLMA 232


>SPBC2D10.14c |myo51||myosin type V|Schizosaccharomyces pombe|chr
            2|||Manual
          Length = 1471

 Score = 26.6 bits (56), Expect = 5.0
 Identities = 17/46 (36%), Positives = 23/46 (50%)
 Frame = +1

Query: 325  WAERKNLPIQTKRKVERQLKKXGSRRKKLPVLRRNTRTSQNSFRKW 462
            + ++KNL      +V +QLK   S  KK+ VLR       NS  KW
Sbjct: 905  YEKQKNLQASIT-EVSKQLK---SNSKKVTVLRNKLNILNNSLSKW 946


>SPCC70.09c |mug9||conserved fungal protein|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 208

 Score = 25.8 bits (54), Expect = 8.7
 Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
 Frame = +2

Query: 278 WQSLGAGNTP----KAAPKAGLKERISLFKLSEKLNANSR 385
           WQ +  G  P    KAA  + LK   SL + ++++NANS+
Sbjct: 69  WQDVAEGKVPASNEKAARVSNLKTVPSLKRENKEVNANSK 108


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,288,897
Number of Sequences: 5004
Number of extensions: 60845
Number of successful extensions: 125
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 125
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 471335896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)