Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_O21
         (929 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0001 - 3864-4049,4861-4917,5514-5648,5710-5808,5884-5952,6...    36   0.035
04_03_0988 - 21469811-21469831,21470823-21471047,21471327-214716...    34   0.19 
02_04_0214 - 20976977-20977171,20977499-20977611,20978041-209781...    33   0.43 
02_04_0182 + 20719782-20720033,20720502-20720605,20720693-207210...    32   0.57 
04_04_0092 - 22759791-22760676,22761446-22761813,22762202-227622...    30   3.0  
03_06_0014 - 31012116-31012229,31012773-31012985,31013058-310131...    28   9.2  
03_02_0324 - 7463482-7463601,7463660-7463736,7463827-7463883,746...    28   9.2  

>02_01_0001 -
           3864-4049,4861-4917,5514-5648,5710-5808,5884-5952,
           6419-6493,6619-6705,6873-6953,7021-7163,7262-7430,
           7538-7667,7753-8255
          Length = 577

 Score = 36.3 bits (80), Expect = 0.035
 Identities = 19/61 (31%), Positives = 34/61 (55%)
 Frame = +2

Query: 176 EENVLVLSKANFETVISTTEYILVEFLWLHGCGHWQSLGAGNTPKAAPKAGLKERISLFK 355
           E +V +LS ANF   +++  +++VEF +   C H Q+L       AA  + L  +++L K
Sbjct: 72  ETHVFLLSAANFSDFLASHRHVMVEF-YAPWCAHCQALAPDYAAAAADLSPLAHQVALAK 130

Query: 356 L 358
           +
Sbjct: 131 V 131


>04_03_0988 -
           21469811-21469831,21470823-21471047,21471327-21471634,
           21471864-21472234,21472327-21472430,21473086-21473325
          Length = 422

 Score = 33.9 bits (74), Expect = 0.19
 Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
 Frame = +2

Query: 185 VLVLSKANFETVISTTEYILVEFLWLHGCGHWQSLGAGNTPKAAP-KAGLKERISLFKLS 361
           V+ L +++FE  +   +Y+ V+F +   CGH + L A    +AAP  AGL E I + K++
Sbjct: 44  VIELDESSFEAALGAIDYLFVDF-YAPWCGHCKRL-APELDEAAPVLAGLSEPIIVAKVN 101


>02_04_0214 -
           20976977-20977171,20977499-20977611,20978041-20978158,
           20978585-20978701,20978836-20978973,20979193-20979318,
           20979827-20980015,20980539-20980863,20980977-20981134
          Length = 492

 Score = 32.7 bits (71), Expect = 0.43
 Identities = 22/76 (28%), Positives = 31/76 (40%)
 Frame = +2

Query: 152 LSEMXVATEENVLVLSKANFETVISTTEYILVEFLWLHGCGHWQSLGAGNTPKAAPKAGL 331
           L+    A  E VL L   NF  V+   ++I+VEF +   CGH   L       AA     
Sbjct: 16  LASSAAAEGEAVLTLDAGNFTEVVGAHDFIVVEF-YAPWCGHCNQLAPEYEAAAAALRSH 74

Query: 332 KERISLFKLSEKLNAN 379
              + L K+    + N
Sbjct: 75  DPPVVLAKVDASADLN 90


>02_04_0182 +
           20719782-20720033,20720502-20720605,20720693-20721066,
           20721302-20721609,20721853-20722092
          Length = 425

 Score = 32.3 bits (70), Expect = 0.57
 Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
 Frame = +2

Query: 140 G*GSLSEMXVATEENVLVLSKANFETVISTTEYILVEFLWLHGCGHWQSLGAGNTPKAAP 319
           G G   E  +  +  VL L   NF+  +     + V+F +   CGH + L A    +AAP
Sbjct: 33  GGGEAEEFQIPRDGRVLELDDGNFDAAVRAAGLLFVDF-YAPWCGHCKRL-APQLDEAAP 90

Query: 320 -KAGLKERISLFKLS 361
             AGL   I + K++
Sbjct: 91  VLAGLSTPIVVAKVN 105


>04_04_0092 -
           22759791-22760676,22761446-22761813,22762202-22762207,
           22763365-22763603,22764808-22765339
          Length = 676

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -3

Query: 306 GVFPAPRDCQCPHPWSHRNSTKMYSVVEITVSKLALLKTS 187
           G     RD +   PWSH   T    V+ I +SK+A +K +
Sbjct: 372 GAISESRDLRRVEPWSHGVHTSNPDVLSIPISKMASVKAA 411


>03_06_0014 -
           31012116-31012229,31012773-31012985,31013058-31013171,
           31013909-31014040,31014624-31014692,31014763-31015017,
           31015347-31015520,31016104-31016280,31016999-31017107,
           31017343-31017506,31018221-31018517
          Length = 605

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 15/31 (48%), Positives = 15/31 (48%)
 Frame = +2

Query: 497 PSLNXHHPVXLKKKKTGPPCXLXVPXWLEPG 589
           P  N  H   LK K  GPP  L VP  L PG
Sbjct: 217 PDENIEHE--LKDKPLGPPLNLVVPRMLPPG 245


>03_02_0324 -
           7463482-7463601,7463660-7463736,7463827-7463883,
           7464154-7464246,7464528-7464654,7464836-7466794
          Length = 810

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
 Frame = -3

Query: 399 ARSXFLELAFNFSLSLNREILSFSPA--LGAALGVFPAPRDCQCPHPWSHRNSTKMYSVV 226
           A   F E+ +   +S N  I  F+ A   G A+ VF      QCP P +   ++ + S+ 
Sbjct: 176 AYQMFEEMQYRDVVSWNAMISGFAHAGLFGRAMDVFRELVALQCPKPDAGTMASILPSMG 235

Query: 225 EITVSKLALLK 193
           +  V  +ALLK
Sbjct: 236 KARVEDIALLK 246


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,878,574
Number of Sequences: 37544
Number of extensions: 416108
Number of successful extensions: 812
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 811
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2659245980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)