Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_O21
         (929 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41542-8|AAN39682.1|  437|Caenorhabditis elegans Protein disulfi...    50   2e-06
U41542-7|ABO16445.1|  371|Caenorhabditis elegans Protein disulfi...    50   2e-06
U41542-6|AAK39152.1|  493|Caenorhabditis elegans Protein disulfi...    50   2e-06
Z37139-1|CAA85491.1|  485|Caenorhabditis elegans Hypothetical pr...    44   1e-04
U95074-1|AAB94647.1|  485|Caenorhabditis elegans protein disulph...    44   1e-04
L15188-9|AAM22024.1|  618|Caenorhabditis elegans Hypothetical pr...    36   0.041
Z82068-5|CAB04896.2|  218|Caenorhabditis elegans Hypothetical pr...    31   1.2  
AL031629-3|CAA20976.1|  555|Caenorhabditis elegans Hypothetical ...    30   2.1  
U40411-4|AAC47065.1|  440|Caenorhabditis elegans Temporarily ass...    29   6.3  

>U41542-8|AAN39682.1|  437|Caenorhabditis elegans Protein disulfide
           isomerase protein2, isoform b protein.
          Length = 437

 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 50/132 (37%), Positives = 65/132 (49%)
 Frame = +2

Query: 155 SEMXVATEENVLVLSKANFETVISTTEYILVEFLWLHGCGHWQSLGAGNTPKAAPKAGLK 334
           S   +  EENV+VL+K NF+ VI+  E+ILVEF +   CGH +SL A    KAA +  LK
Sbjct: 15  SAAVIEEEENVIVLTKDNFDEVINGNEFILVEF-YAPWCGHCKSL-APEYAKAATQ--LK 70

Query: 335 ERISLFKLSEKLNANSRNXDLAGRSYRCYEGIPELLKIPSGNGQSLXD*FRVGRPSLNXH 514
           E  S  KL  KL+A       +    R   G P L    +G  Q     +  GR   +  
Sbjct: 71  EEGSDIKLG-KLDATVHGEVSSKFEVR---GYPTLKLFRNGKPQE----YNGGR---DHD 119

Query: 515 HPVXLKKKKTGP 550
             +   KKKTGP
Sbjct: 120 SIIAWLKKKTGP 131


>U41542-7|ABO16445.1|  371|Caenorhabditis elegans Protein disulfide
           isomerase protein2, isoform c protein.
          Length = 371

 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 50/132 (37%), Positives = 65/132 (49%)
 Frame = +2

Query: 155 SEMXVATEENVLVLSKANFETVISTTEYILVEFLWLHGCGHWQSLGAGNTPKAAPKAGLK 334
           S   +  EENV+VL+K NF+ VI+  E+ILVEF +   CGH +SL A    KAA +  LK
Sbjct: 15  SAAVIEEEENVIVLTKDNFDEVINGNEFILVEF-YAPWCGHCKSL-APEYAKAATQ--LK 70

Query: 335 ERISLFKLSEKLNANSRNXDLAGRSYRCYEGIPELLKIPSGNGQSLXD*FRVGRPSLNXH 514
           E  S  KL  KL+A       +    R   G P L    +G  Q     +  GR   +  
Sbjct: 71  EEGSDIKLG-KLDATVHGEVSSKFEVR---GYPTLKLFRNGKPQE----YNGGR---DHD 119

Query: 515 HPVXLKKKKTGP 550
             +   KKKTGP
Sbjct: 120 SIIAWLKKKTGP 131


>U41542-6|AAK39152.1|  493|Caenorhabditis elegans Protein disulfide
           isomerase protein2, isoform a protein.
          Length = 493

 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 50/132 (37%), Positives = 65/132 (49%)
 Frame = +2

Query: 155 SEMXVATEENVLVLSKANFETVISTTEYILVEFLWLHGCGHWQSLGAGNTPKAAPKAGLK 334
           S   +  EENV+VL+K NF+ VI+  E+ILVEF +   CGH +SL A    KAA +  LK
Sbjct: 15  SAAVIEEEENVIVLTKDNFDEVINGNEFILVEF-YAPWCGHCKSL-APEYAKAATQ--LK 70

Query: 335 ERISLFKLSEKLNANSRNXDLAGRSYRCYEGIPELLKIPSGNGQSLXD*FRVGRPSLNXH 514
           E  S  KL  KL+A       +    R   G P L    +G  Q     +  GR   +  
Sbjct: 71  EEGSDIKLG-KLDATVHGEVSSKFEVR---GYPTLKLFRNGKPQE----YNGGR---DHD 119

Query: 515 HPVXLKKKKTGP 550
             +   KKKTGP
Sbjct: 120 SIIAWLKKKTGP 131


>Z37139-1|CAA85491.1|  485|Caenorhabditis elegans Hypothetical
           protein C14B1.1 protein.
          Length = 485

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 47/128 (36%), Positives = 66/128 (51%)
 Frame = +2

Query: 167 VATEENVLVLSKANFETVISTTEYILVEFLWLHGCGHWQSLGAGNTPKAAPKAGLKERIS 346
           VA  ENVLVL+++NFE  I+  E++LV+F +   C H +SL A    +AA    LKE  S
Sbjct: 19  VADSENVLVLTESNFEETINGNEFVLVKF-YAPWCVHCKSL-APKYDEAADL--LKEEGS 74

Query: 347 LFKLSEKLNANSRNXDLAGRSYRCYEGIPELLKIPSGNGQSLXD*FRVGRPSLNXHHPVX 526
             KL+ K++A + N  LA +      G P +L   SG        +  GR +      V 
Sbjct: 75  DIKLA-KVDA-TENQALASKFE--VRGYPTILYFKSGKPTK----YTGGRATAQI---VD 123

Query: 527 LKKKKTGP 550
             KKK+GP
Sbjct: 124 WVKKKSGP 131


>U95074-1|AAB94647.1|  485|Caenorhabditis elegans protein disulphide
           isomerase isoformI protein.
          Length = 485

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 47/128 (36%), Positives = 66/128 (51%)
 Frame = +2

Query: 167 VATEENVLVLSKANFETVISTTEYILVEFLWLHGCGHWQSLGAGNTPKAAPKAGLKERIS 346
           VA  ENVLVL+++NFE  I+  E++LV+F +   C H +SL A    +AA    LKE  S
Sbjct: 19  VADSENVLVLTESNFEETINGNEFVLVKF-YAPWCVHCKSL-APKYDEAADL--LKEEGS 74

Query: 347 LFKLSEKLNANSRNXDLAGRSYRCYEGIPELLKIPSGNGQSLXD*FRVGRPSLNXHHPVX 526
             KL+ K++A + N  LA +      G P +L   SG        +  GR +      V 
Sbjct: 75  DIKLA-KVDA-TENQALASKFE--VRGYPTILYFKSGKPTK----YTGGRATAQI---VD 123

Query: 527 LKKKKTGP 550
             KKK+GP
Sbjct: 124 WVKKKSGP 131


>L15188-9|AAM22024.1|  618|Caenorhabditis elegans Hypothetical
           protein C14B9.2 protein.
          Length = 618

 Score = 35.9 bits (79), Expect = 0.041
 Identities = 26/62 (41%), Positives = 34/62 (54%)
 Frame = +2

Query: 179 ENVLVLSKANFETVISTTEYILVEFLWLHGCGHWQSLGAGNTPKAAPKAGLKERISLFKL 358
           E V+ L+  NF+  IS  E +LVEF +   CGH + L A    KAA K  LK + S  KL
Sbjct: 147 EEVVTLTTENFDDFISNNELVLVEF-YAPWCGHCKKL-APEYEKAAQK--LKAQGSKVKL 202

Query: 359 SE 364
            +
Sbjct: 203 GK 204


>Z82068-5|CAB04896.2|  218|Caenorhabditis elegans Hypothetical
           protein W04A4.2 protein.
          Length = 218

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -3

Query: 297 PAPRDCQCPHPWSHRNSTKMYSVVEI 220
           PAP  CQC H WS   S + +SV+ +
Sbjct: 152 PAPTTCQCEHFWSDTASIEGWSVLNL 177


>AL031629-3|CAA20976.1|  555|Caenorhabditis elegans Hypothetical
           protein Y106G6D.3 protein.
          Length = 555

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 19/58 (32%), Positives = 30/58 (51%)
 Frame = +1

Query: 286 SGRREYAQGXPQSWAERKNLPIQTKRKVERQLKKXGSRRKKLPVLRRNTRTSQNSFRK 459
           +G+R  ++   +S    K+   Q  ++   Q KK  SRRKK  + +  +R SQ S RK
Sbjct: 34  TGQRSNSRNSRKSSRSNKSKRSQRSKRRSAQRKKSSSRRKK-KLRKEKSRKSQRSKRK 90


>U40411-4|AAC47065.1|  440|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 320 protein.
          Length = 440

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 15/39 (38%), Positives = 29/39 (74%), Gaps = 1/39 (2%)
 Frame = +2

Query: 176 EENVLVLSKANFET-VISTTEYILVEFLWLHGCGHWQSL 289
           +++V+ L++ANF++ VI++ +  +VEF +   CGH +SL
Sbjct: 23  KDDVVELTEANFQSKVINSDDIWIVEF-YAPWCGHCKSL 60


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,090,827
Number of Sequences: 27780
Number of extensions: 342504
Number of successful extensions: 606
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 592
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 605
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2391724104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)