Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_O17
         (889 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0871 - 20441689-20441756,20442220-20442349,20442422-204425...   180   2e-45
02_04_0100 - 19730137-19730237,19731215-19731344,19731419-197315...   168   6e-42
02_01_0469 - 3359156-3359500,3359595-3359680,3359766-3359811,335...   161   7e-40
02_01_0045 + 307058-307552,308670-308716,308779-308866,309664-30...    50   2e-06
08_02_0250 + 14772746-14773037,14773141-14773203,14773458-147736...    29   6.5  

>04_03_0871 -
           20441689-20441756,20442220-20442349,20442422-20442507,
           20444271-20444316,20444425-20444547,20445302-20445370
          Length = 173

 Score =  180 bits (437), Expect = 2e-45
 Identities = 91/137 (66%), Positives = 101/137 (73%)
 Frame = +1

Query: 94  RKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVK 273
           +K +  KEE  VTLGP    GE VFGVAHIFASFNDTF+HVTDLSGRET+ R+TGGMKVK
Sbjct: 27  KKTREPKEE-NVTLGPTVREGEYVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVK 85

Query: 274 ADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRXXXXXXXXXXXXXXQXXXXXXXXXX 453
           ADRDE+SPYAAMLA+QDVA++CK LGITALHIKLR              Q          
Sbjct: 86  ADRDESSPYAAMLASQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSG 145

Query: 454 MKIGRIEDVTPVPSDST 504
           MKIGRIEDVTPVP+DST
Sbjct: 146 MKIGRIEDVTPVPTDST 162


>02_04_0100 -
           19730137-19730237,19731215-19731344,19731419-19731504,
           19732410-19732455,19732558-19732680,19732779-19732781
          Length = 162

 Score =  168 bits (408), Expect = 6e-42
 Identities = 91/151 (60%), Positives = 101/151 (66%), Gaps = 11/151 (7%)
 Frame = +1

Query: 85  MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 264
           M+ RK     +E  VTLGP    GE VFGVAHIFASFNDTF+HVTDLSGRET+ R+TGGM
Sbjct: 1   MSGRKKTREPKEENVTLGPTVREGEYVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGM 60

Query: 265 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRXXXXXXXXXXXXXXQXXXXXXX 444
           KVKADRDE+SPYAAMLA+QDVA++CK LGITALHIKLR              Q       
Sbjct: 61  KVKADRDESSPYAAMLASQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALA 120

Query: 445 XXXMKIGRI-----------EDVTPVPSDST 504
              MKIGRI           EDVTPVP+DST
Sbjct: 121 RSGMKIGRIADDVLSIFCHTEDVTPVPTDST 151


>02_01_0469 -
           3359156-3359500,3359595-3359680,3359766-3359811,
           3359897-3360016,3360622-3360624
          Length = 199

 Score =  161 bits (391), Expect = 7e-40
 Identities = 83/129 (64%), Positives = 92/129 (71%)
 Frame = +1

Query: 85  MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 264
           M+ RK +  KEE  VTLGP    GE VFGVAHIFASFNDTF+HVTDLSGRET+ R+TGGM
Sbjct: 1   MSKRKTREPKEE-NVTLGPTVREGEYVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGM 59

Query: 265 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRXXXXXXXXXXXXXXQXXXXXXX 444
           KVKADRDE+SPYAAMLA+QDVA++CK LGITALHIKLR              Q       
Sbjct: 60  KVKADRDESSPYAAMLASQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALA 119

Query: 445 XXXMKIGRI 471
              MKIGRI
Sbjct: 120 RSGMKIGRI 128


>02_01_0045 +
           307058-307552,308670-308716,308779-308866,309664-309756,
           309788-309950,310554-310627,310889-310927
          Length = 332

 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 23/31 (74%), Positives = 26/31 (83%)
 Frame = +1

Query: 250 VTGGMKVKADRDEASPYAAMLAAQDVAEKCK 342
           V GGMK+KAD DE+SPYAAML +QDVA  CK
Sbjct: 211 VGGGMKIKADCDESSPYAAMLVSQDVALCCK 241



 Score = 29.5 bits (63), Expect = 3.7
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +1

Query: 250 VTGGMKVKADRDEASPYAAMLAAQDVA 330
           V GGM +K+D DE SP+ + +   D++
Sbjct: 166 VGGGMNIKSDCDEPSPHCSCVGQTDIS 192


>08_02_0250 +
           14772746-14773037,14773141-14773203,14773458-14773621,
           14774126-14774220,14774517-14774728,14774972-14775009,
           14775131-14775424,14775510-14775617
          Length = 421

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 13/37 (35%), Positives = 15/37 (40%)
 Frame = +3

Query: 357 GLAHKAPCYWWKQNKXPWSWCSVCTSGSCSFKYEDWP 467
           G  H  PC+ W      W WC    SG C   +  WP
Sbjct: 345 GKPHGWPCWGW-DGAEMWLWCQSKNSGHC---HIGWP 377


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,024,864
Number of Sequences: 37544
Number of extensions: 431192
Number of successful extensions: 807
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 804
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)