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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_O15
         (1049 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41538-2|AAG00010.1|  997|Caenorhabditis elegans Hypothetical pr...    42   0.001
Z98866-8|CAB11562.2|  425|Caenorhabditis elegans Hypothetical pr...    32   0.78 
Z46676-8|CAB60993.2|  388|Caenorhabditis elegans Hypothetical pr...    30   2.4  
U41557-6|AAA83307.1|  589|Caenorhabditis elegans Collagen sequen...    30   2.4  
U24189-3|AAC47514.1|  398|Caenorhabditis elegans RRM-type RNA bi...    30   2.4  
U40799-6|AAA81484.2|  210|Caenorhabditis elegans Ground-like (gr...    30   3.2  
AF098500-3|ABD94103.1|  774|Caenorhabditis elegans Temporarily a...    30   3.2  
AF098500-2|AAC67399.2|  996|Caenorhabditis elegans Temporarily a...    30   3.2  
AF038613-8|AAL02515.2|  309|Caenorhabditis elegans Human hnrnp a...    29   4.2  
AF038613-6|ABB51186.1|  347|Caenorhabditis elegans Human hnrnp a...    29   4.2  
AL132864-1|CAB63392.1|  613|Caenorhabditis elegans Hypothetical ...    29   5.5  
AL023835-10|CAA19494.2|  691|Caenorhabditis elegans Hypothetical...    29   5.5  
Z68301-5|CAA92620.1|  301|Caenorhabditis elegans Hypothetical pr...    29   7.3  
V00148-1|CAA23464.1|  301|Caenorhabditis elegans protein ( Caeno...    29   7.3  
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def...    29   7.3  
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def...    29   7.3  
J01048-1|AAA27990.1|  301|Caenorhabditis elegans protein ( C.ele...    29   7.3  
D10877-1|BAA01645.1|  346|Caenorhabditis elegans hnRNP like prot...    29   7.3  
AY347575-1|AAP97869.1|  301|Caenorhabditis elegans COLlagen stru...    29   7.3  
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.    29   7.3  
AF038613-7|ABB51185.1|  308|Caenorhabditis elegans Human hnrnp a...    29   7.3  
AF038613-5|AAB92051.1|  346|Caenorhabditis elegans Human hnrnp a...    29   7.3  
AF000298-11|AAM97960.1|  518|Caenorhabditis elegans Prion-like-(...    29   7.3  
AF000298-10|AAM97961.1|  539|Caenorhabditis elegans Prion-like-(...    29   7.3  
AF000298-8|AAC48255.2|  524|Caenorhabditis elegans Prion-like-(q...    29   7.3  
Z79596-1|CAB01857.1|  830|Caenorhabditis elegans Hypothetical pr...    28   9.7  
L29031-1|AAB72228.2|  830|Caenorhabditis elegans dynamin protein.      28   9.7  

>U41538-2|AAG00010.1|  997|Caenorhabditis elegans Hypothetical
           protein R04E5.8a protein.
          Length = 997

 Score = 41.5 bits (93), Expect = 0.001
 Identities = 25/83 (30%), Positives = 29/83 (34%)
 Frame = +1

Query: 586 PAPPPREKAVGXMGXPSPXPPLHXTPXPPRXFXXXXXXXXXXXSKGRXXPVXPPXPXGPX 765
           P PPPR+   G    P P PP      PPR                R  P+ PP P    
Sbjct: 124 PPPPPRKSRAGGSSPPPPPPPRVPRTPPPR------------SPPPRRPPMTPPSPQRRP 171

Query: 766 PRKTPXXTQXGXPKRPXTPSKXP 834
           PR  P       P+ P +P   P
Sbjct: 172 PRTPPSPEPRNPPRTPPSPIPPP 194



 Score = 30.7 bits (66), Expect = 1.8
 Identities = 13/45 (28%), Positives = 17/45 (37%)
 Frame = +3

Query: 744 PXPXGXXPQKNPLXXPKXPPQKARNPVKKXXXRXPFFPXRPXPPP 878
           P P    P++ P+  P    +  R P        P  P  P PPP
Sbjct: 150 PPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPPP 194


>Z98866-8|CAB11562.2|  425|Caenorhabditis elegans Hypothetical
           protein Y49E10.10 protein.
          Length = 425

 Score = 31.9 bits (69), Expect = 0.78
 Identities = 21/85 (24%), Positives = 27/85 (31%), Gaps = 4/85 (4%)
 Frame = +1

Query: 592 PPPREKAVGXMGXPSPXPPLHXTPXPPRXFXXXXXXXXXXXSK----GRXXPVXPPXPXG 759
           PPP  KA       +P PP    P PP              +      +  PV  P P  
Sbjct: 176 PPPTTKAPPPPTTKAPPPPTTKAPPPPTTKAPPPPTTNKEVTTVAPVPKPAPVTAPAPNP 235

Query: 760 PXPRKTPXXTQXGXPKRPXTPSKXP 834
           P P  T    +   P +   P+  P
Sbjct: 236 PAPENTTAKVETTKPTKAAPPAPTP 260


>Z46676-8|CAB60993.2|  388|Caenorhabditis elegans Hypothetical
           protein C08B11.5 protein.
          Length = 388

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 26/90 (28%), Positives = 27/90 (30%), Gaps = 6/90 (6%)
 Frame = +1

Query: 583 TPAPPPREKAVGXMGXPSPXPPLHXTPXP---PRXFXXXXXXXXXXXSKGRXXPVXPP-- 747
           TP PPP   +   M  P P PP   TP P   P                G   P  PP  
Sbjct: 284 TPRPPPPPSS--GMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGM 341

Query: 748 -XPXGPXPRKTPXXTQXGXPKRPXTPSKXP 834
             P G  P   P     G    P  P   P
Sbjct: 342 RYPGGMPPPPPPRYPSAGPGMYPPPPPSRP 371


>U41557-6|AAA83307.1|  589|Caenorhabditis elegans Collagen sequence
           x-hybridizingprotein 1 protein.
          Length = 589

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 21/74 (28%), Positives = 24/74 (32%), Gaps = 1/74 (1%)
 Frame = +1

Query: 631 PSPXPPLHXTPXPPRXFXXXXXXXXXXXSKG-RXXPVXPPXPXGPXPRKTPXXTQXGXPK 807
           PS  P     P  PR               G    P  PP P GP  R  P  ++   P 
Sbjct: 51  PSDLPDPSSPPPAPRPSGQPPGPQGPSDLPGPSGAPPGPPHPSGPPHRPHPHPSRRPRPT 110

Query: 808 RPXTPSKXPXFAXP 849
           R   PS+ P    P
Sbjct: 111 RLPRPSRSPHSDAP 124


>U24189-3|AAC47514.1|  398|Caenorhabditis elegans RRM-type RNA
           binding protein protein.
          Length = 398

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 26/90 (28%), Positives = 27/90 (30%), Gaps = 6/90 (6%)
 Frame = +1

Query: 583 TPAPPPREKAVGXMGXPSPXPPLHXTPXP---PRXFXXXXXXXXXXXSKGRXXPVXPP-- 747
           TP PPP   +   M  P P PP   TP P   P                G   P  PP  
Sbjct: 294 TPRPPPPPSS--GMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGM 351

Query: 748 -XPXGPXPRKTPXXTQXGXPKRPXTPSKXP 834
             P G  P   P     G    P  P   P
Sbjct: 352 RYPGGMPPPPPPRYPSAGPGMYPPPPPSRP 381


>U40799-6|AAA81484.2|  210|Caenorhabditis elegans Ground-like (grd
           related) protein 4 protein.
          Length = 210

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 14/41 (34%), Positives = 16/41 (39%)
 Frame = +2

Query: 698 PVXTXPPKGGXXRFXPXXPGXLPPEKPPXXPKXAXPKGPXP 820
           P+   PP     +F P  P   PP  PP  P    P  P P
Sbjct: 42  PLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMP 82


>AF098500-3|ABD94103.1|  774|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 343, isoform b protein.
          Length = 774

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 17/46 (36%), Positives = 17/46 (36%)
 Frame = +3

Query: 741 PPXPXGXXPQKNPLXXPKXPPQKARNPVKKXXXRXPFFPXRPXPPP 878
           PP P    P  NP   P  PP     P  K   R P  P  P P P
Sbjct: 73  PPLPPPPLPLSNPPAKPTPPP-----PPPKPTIRPPPIPASPPPRP 113


>AF098500-2|AAC67399.2|  996|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 343, isoform a protein.
          Length = 996

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 17/46 (36%), Positives = 17/46 (36%)
 Frame = +3

Query: 741 PPXPXGXXPQKNPLXXPKXPPQKARNPVKKXXXRXPFFPXRPXPPP 878
           PP P    P  NP   P  PP     P  K   R P  P  P P P
Sbjct: 295 PPLPPPPLPLSNPPAKPTPPP-----PPPKPTIRPPPIPASPPPRP 335


>AF038613-8|AAL02515.2|  309|Caenorhabditis elegans Human hnrnp a1
           homolog protein1, isoform b protein.
          Length = 309

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 18/61 (29%), Positives = 23/61 (37%)
 Frame = -1

Query: 767 GXGPXGXGGXTGXXRPLEGGXXXXXXXXGKXRGGXGVXWRGGXGEGXPIXPTAFSRGGGA 588
           G G  G G   G      GG         + +GG G   +GG G+G    P    +GG  
Sbjct: 210 GQGGYGGGNYGGGWGQQGGGGQGGWGGPQQQQGGGGWGQQGGGGQGGWGGPQQQQQGGWG 269

Query: 587 G 585
           G
Sbjct: 270 G 270


>AF038613-6|ABB51186.1|  347|Caenorhabditis elegans Human hnrnp a1
           homolog protein1, isoform d protein.
          Length = 347

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 18/61 (29%), Positives = 23/61 (37%)
 Frame = -1

Query: 767 GXGPXGXGGXTGXXRPLEGGXXXXXXXXGKXRGGXGVXWRGGXGEGXPIXPTAFSRGGGA 588
           G G  G G   G      GG         + +GG G   +GG G+G    P    +GG  
Sbjct: 248 GQGGYGGGNYGGGWGQQGGGGQGGWGGPQQQQGGGGWGQQGGGGQGGWGGPQQQQQGGWG 307

Query: 587 G 585
           G
Sbjct: 308 G 308


>AL132864-1|CAB63392.1|  613|Caenorhabditis elegans Hypothetical
           protein Y53H1A.1 protein.
          Length = 613

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 23/88 (26%), Positives = 25/88 (28%), Gaps = 1/88 (1%)
 Frame = +1

Query: 589 APPPREKA-VGXMGXPSPXPPLHXTPXPPRXFXXXXXXXXXXXSKGRXXPVXPPXPXGPX 765
           APPP      G  G     PP H  P PPR              +    P  P  P  P 
Sbjct: 113 APPPAHHGHFGPPGHHFQGPPQHFPPGPPRP-HFPGPPGPHRPPEHYPGPPRPQAPAAPP 171

Query: 766 PRKTPXXTQXGXPKRPXTPSKXPXFAXP 849
           P+      Q   P      S    F  P
Sbjct: 172 PKSLFPSAQKPKPLFAAASSAPSFFGAP 199


>AL023835-10|CAA19494.2|  691|Caenorhabditis elegans Hypothetical
           protein Y37A1B.11 protein.
          Length = 691

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 14/30 (46%), Positives = 14/30 (46%)
 Frame = +1

Query: 583 TPAPPPREKAVGXMGXPSPXPPLHXTPXPP 672
           TP PPPRE        P P P    TP PP
Sbjct: 547 TPPPPPREPTPREP-TPEPEPVREPTPPPP 575


>Z68301-5|CAA92620.1|  301|Caenorhabditis elegans Hypothetical
           protein W01B6.7 protein.
          Length = 301

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 19/79 (24%), Positives = 19/79 (24%)
 Frame = +1

Query: 586 PAPPPREKAVGXMGXPSPXPPLHXTPXPPRXFXXXXXXXXXXXSKGRXXPVXPPXPXGPX 765
           P  P      G  G P P  P      P                 G   P  PP P GP 
Sbjct: 173 PGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEPGPAGPPGPAGPA 232

Query: 766 PRKTPXXTQXGXPKRPXTP 822
                  T    P  P  P
Sbjct: 233 GNDGAPGTGGPGPAGPKGP 251


>V00148-1|CAA23464.1|  301|Caenorhabditis elegans protein (
           Caenorhabditis elegansgene Col-2 coding for a collagen.
           ).
          Length = 301

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 19/79 (24%), Positives = 19/79 (24%)
 Frame = +1

Query: 586 PAPPPREKAVGXMGXPSPXPPLHXTPXPPRXFXXXXXXXXXXXSKGRXXPVXPPXPXGPX 765
           P  P      G  G P P  P      P                 G   P  PP P GP 
Sbjct: 173 PGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEPGPAGPPGPAGPA 232

Query: 766 PRKTPXXTQXGXPKRPXTP 822
                  T    P  P  P
Sbjct: 233 GNDGAPGTGGPGPAGPKGP 251


>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoformb protein.
          Length = 1437

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 16/44 (36%), Positives = 16/44 (36%), Gaps = 3/44 (6%)
 Frame = +2

Query: 698 PVXTXPPKGGXXRFXPXXPGXLPPEKPPXXP---KXAXPKGPXP 820
           P    PP  G     P  PG  PP  PP  P   K   P  P P
Sbjct: 747 PPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790


>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoforma protein.
          Length = 1435

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 16/44 (36%), Positives = 16/44 (36%), Gaps = 3/44 (6%)
 Frame = +2

Query: 698 PVXTXPPKGGXXRFXPXXPGXLPPEKPPXXP---KXAXPKGPXP 820
           P    PP  G     P  PG  PP  PP  P   K   P  P P
Sbjct: 747 PPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790


>J01048-1|AAA27990.1|  301|Caenorhabditis elegans protein (
           C.elegans (nematode)collagen 2 (col-2) gene, complete
           cds. ).
          Length = 301

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 19/79 (24%), Positives = 19/79 (24%)
 Frame = +1

Query: 586 PAPPPREKAVGXMGXPSPXPPLHXTPXPPRXFXXXXXXXXXXXSKGRXXPVXPPXPXGPX 765
           P  P      G  G P P  P      P                 G   P  PP P GP 
Sbjct: 173 PGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEPGPAGPPGPAGPA 232

Query: 766 PRKTPXXTQXGXPKRPXTP 822
                  T    P  P  P
Sbjct: 233 GNDGAPGTGGPGPAGPKGP 251


>D10877-1|BAA01645.1|  346|Caenorhabditis elegans hnRNP like protein
           protein.
          Length = 346

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
 Frame = -1

Query: 767 GXGPXGXGGXTGXXRPLEGGXXXXXXXXGKXR-GGXGVXWRGGXGEGXPIXPTAFSRGGG 591
           G G  G GG  G     +GG         + + GG G   +GG G+G    P    +GG 
Sbjct: 246 GGGQGGYGGDYGGGWGQQGGGGQGGWGGPQQQQGGGGWGQQGGGGQGGWGGPQQQQQGGW 305

Query: 590 AG 585
            G
Sbjct: 306 GG 307


>AY347575-1|AAP97869.1|  301|Caenorhabditis elegans COLlagen
           structural gene, probabledorsal and ventral cuticle
           component, from embryo to adult,but maximal in dauer
           (28.0 kD) (col-2) protein.
          Length = 301

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 19/79 (24%), Positives = 19/79 (24%)
 Frame = +1

Query: 586 PAPPPREKAVGXMGXPSPXPPLHXTPXPPRXFXXXXXXXXXXXSKGRXXPVXPPXPXGPX 765
           P  P      G  G P P  P      P                 G   P  PP P GP 
Sbjct: 173 PGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEPGPAGPPGPAGPA 232

Query: 766 PRKTPXXTQXGXPKRPXTP 822
                  T    P  P  P
Sbjct: 233 GNDGAPGTGGPGPAGPKGP 251


>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
          Length = 1018

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 16/44 (36%), Positives = 16/44 (36%), Gaps = 3/44 (6%)
 Frame = +2

Query: 698 PVXTXPPKGGXXRFXPXXPGXLPPEKPPXXP---KXAXPKGPXP 820
           P    PP  G     P  PG  PP  PP  P   K   P  P P
Sbjct: 330 PPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 373


>AF038613-7|ABB51185.1|  308|Caenorhabditis elegans Human hnrnp a1
           homolog protein1, isoform c protein.
          Length = 308

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
 Frame = -1

Query: 767 GXGPXGXGGXTGXXRPLEGGXXXXXXXXGKXR-GGXGVXWRGGXGEGXPIXPTAFSRGGG 591
           G G  G GG  G     +GG         + + GG G   +GG G+G    P    +GG 
Sbjct: 208 GGGQGGYGGDYGGGWGQQGGGGQGGWGGPQQQQGGGGWGQQGGGGQGGWGGPQQQQQGGW 267

Query: 590 AG 585
            G
Sbjct: 268 GG 269


>AF038613-5|AAB92051.1|  346|Caenorhabditis elegans Human hnrnp a1
           homolog protein1, isoform a protein.
          Length = 346

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
 Frame = -1

Query: 767 GXGPXGXGGXTGXXRPLEGGXXXXXXXXGKXR-GGXGVXWRGGXGEGXPIXPTAFSRGGG 591
           G G  G GG  G     +GG         + + GG G   +GG G+G    P    +GG 
Sbjct: 246 GGGQGGYGGDYGGGWGQQGGGGQGGWGGPQQQQGGGGWGQQGGGGQGGWGGPQQQQQGGW 305

Query: 590 AG 585
            G
Sbjct: 306 GG 307


>AF000298-11|AAM97960.1|  518|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
           isoform b protein.
          Length = 518

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 15/47 (31%), Positives = 16/47 (34%)
 Frame = +3

Query: 735 GXPPXPXGXXPQKNPLXXPKXPPQKARNPVKKXXXRXPFFPXRPXPP 875
           G PP P    P   P   P  PP     P  +     P  P R  PP
Sbjct: 262 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPP 308


>AF000298-10|AAM97961.1|  539|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
           isoform c protein.
          Length = 539

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 15/47 (31%), Positives = 16/47 (34%)
 Frame = +3

Query: 735 GXPPXPXGXXPQKNPLXXPKXPPQKARNPVKKXXXRXPFFPXRPXPP 875
           G PP P    P   P   P  PP     P  +     P  P R  PP
Sbjct: 283 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPP 329


>AF000298-8|AAC48255.2|  524|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
           isoform a protein.
          Length = 524

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 15/47 (31%), Positives = 16/47 (34%)
 Frame = +3

Query: 735 GXPPXPXGXXPQKNPLXXPKXPPQKARNPVKKXXXRXPFFPXRPXPP 875
           G PP P    P   P   P  PP     P  +     P  P R  PP
Sbjct: 268 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPP 314


>Z79596-1|CAB01857.1|  830|Caenorhabditis elegans Hypothetical
           protein C02C6.1a protein.
          Length = 830

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 19/67 (28%), Positives = 22/67 (32%), Gaps = 2/67 (2%)
 Frame = +1

Query: 586 PAPPPREKAVGXMGXPSPXPPLHXTPXPPRXFXXXXXXXXXXXSKGRXXPVXP--PXPXG 759
           P+P PR       G  +P PP    P  P                G   P+ P  P P G
Sbjct: 763 PSPVPRPAPAPPGGRQAPMPP-RGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGG 821

Query: 760 PXPRKTP 780
           P P   P
Sbjct: 822 PPPNMAP 828


>L29031-1|AAB72228.2|  830|Caenorhabditis elegans dynamin protein.
          Length = 830

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 19/67 (28%), Positives = 22/67 (32%), Gaps = 2/67 (2%)
 Frame = +1

Query: 586 PAPPPREKAVGXMGXPSPXPPLHXTPXPPRXFXXXXXXXXXXXSKGRXXPVXP--PXPXG 759
           P+P PR       G  +P PP    P  P                G   P+ P  P P G
Sbjct: 763 PSPVPRPAPAPPGGRQAPMPP-RGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGG 821

Query: 760 PXPRKTP 780
           P P   P
Sbjct: 822 PPPNMAP 828


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,553,083
Number of Sequences: 27780
Number of extensions: 214079
Number of successful extensions: 1148
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 633
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1008
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2793417546
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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