Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_O14
         (895 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    34   0.007
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    26   1.8  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    26   1.8  
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    26   1.8  
AY545988-1|AAS99341.1|  423|Anopheles gambiae carboxypeptidase B...    25   2.3  
AJ627286-1|CAF28572.1|  423|Anopheles gambiae carboxypeptidase B...    25   2.3  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   5.4  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   9.5  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 33.9 bits (74), Expect = 0.007
 Identities = 18/53 (33%), Positives = 21/53 (39%)
 Frame = -1

Query: 877 GXGGXXGXPPPWGEGKRGXRPXXGXGGGXXLFXGEXXXGPKKENXXSXGGGGG 719
           G GG  G  P  G G  G     G GGG            ++E   + GGGGG
Sbjct: 203 GGGGSGGGAPGGGGGSSGGPGPGGGGGGGGRDRDHRDRDREREGGGNGGGGGG 255



 Score = 26.2 bits (55), Expect = 1.3
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = -2

Query: 888 GVPPGXGGXXGXPPXGGRGKG 826
           G P G GG  G P  GG G G
Sbjct: 210 GAPGGGGGSSGGPGPGGGGGG 230


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 25.8 bits (54), Expect = 1.8
 Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
 Frame = -1

Query: 886 GSPGXGGXXGXPPPWGE-GKRGXRPXXGXGG 797
           G PG  G  G P P GE G RG     G  G
Sbjct: 229 GEPGNDGLEGLPGPQGEVGPRGFPGRPGEKG 259


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 25.8 bits (54), Expect = 1.8
 Identities = 11/27 (40%), Positives = 12/27 (44%)
 Frame = -1

Query: 529 GGPXPPKVXXLXGGPRNPPXKGXXPPP 449
           G P  P +     GP  PP  G  PPP
Sbjct: 94  GMPGAPPLLMGPNGPLPPPMMGMRPPP 120


>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
           protein I protein.
          Length = 1340

 Score = 25.8 bits (54), Expect = 1.8
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +2

Query: 38  KILIQFVAARTLSFDFAKIQNEILEN 115
           KILI  VA RT+ +D+A +  + L N
Sbjct: 491 KILIATVAGRTVVYDYADLDFQELRN 516


>AY545988-1|AAS99341.1|  423|Anopheles gambiae carboxypeptidase B
           precursor protein.
          Length = 423

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 8/16 (50%), Positives = 15/16 (93%)
 Frame = +3

Query: 186 DLEKMGQRVRDAVISA 233
           DL+++G+R RDA+++A
Sbjct: 330 DLQRLGERARDALVAA 345


>AJ627286-1|CAF28572.1|  423|Anopheles gambiae carboxypeptidase B
           protein.
          Length = 423

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 8/16 (50%), Positives = 15/16 (93%)
 Frame = +3

Query: 186 DLEKMGQRVRDAVISA 233
           DL+++G+R RDA+++A
Sbjct: 330 DLQRLGERARDALVAA 345


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 16/52 (30%), Positives = 17/52 (32%), Gaps = 2/52 (3%)
 Frame = +2

Query: 722 PPPXXXPXVFLFXAPXXFPXKQXXPX--PXXXXGAXXPFPLPPXGGXPXXPP 871
           PPP   P       P   P         P    G   P P+P  GG P  PP
Sbjct: 263 PPPIRPPNPMGGPRPQISPQNSNLSGGMPSGMVGPPRP-PMPMQGGAPGGPP 313


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.4 bits (48), Expect = 9.5
 Identities = 7/18 (38%), Positives = 15/18 (83%)
 Frame = +1

Query: 151 LRSRQLPATSSRILKKWV 204
           LRS+++PA+  ++L+ W+
Sbjct: 607 LRSKEVPASLQKLLQHWM 624


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 698,822
Number of Sequences: 2352
Number of extensions: 12631
Number of successful extensions: 31
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 96334083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)