BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_O12
(919 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY494951-1|AAS82582.1| 1250|Homo sapiens lamellipodin protein. 33 1.1
AJ584699-1|CAE48361.1| 1250|Homo sapiens RAPH1 protein protein. 33 1.1
AB051468-1|BAB21772.1| 1236|Homo sapiens KIAA1681 protein protein. 33 1.1
X66188-1|CAA46956.1| 421|Homo sapiens proacrosin protein. 32 3.4
X54017-1|CAA37964.1| 421|Homo sapiens preproacrosin protein. 32 3.4
M77381-1|AAA51575.1| 184|Homo sapiens acrosin protein. 32 3.4
>AY494951-1|AAS82582.1| 1250|Homo sapiens lamellipodin protein.
Length = 1250
Score = 33.5 bits (73), Expect = 1.1
Identities = 16/51 (31%), Positives = 18/51 (35%)
Frame = +2
Query: 494 PPXXKKXXXPPPPXFXXXPPPPXXPRXXXXKKKNXXXARAHXXXXXPGGXK 646
PP PPPP PPPP P K+ + PGG K
Sbjct: 920 PPESSLVFPPPPPSPVPAPPPPPPPTASPTPDKSGSPGKKTSKTSSPGGKK 970
>AJ584699-1|CAE48361.1| 1250|Homo sapiens RAPH1 protein protein.
Length = 1250
Score = 33.5 bits (73), Expect = 1.1
Identities = 16/51 (31%), Positives = 18/51 (35%)
Frame = +2
Query: 494 PPXXKKXXXPPPPXFXXXPPPPXXPRXXXXKKKNXXXARAHXXXXXPGGXK 646
PP PPPP PPPP P K+ + PGG K
Sbjct: 920 PPESSLVFPPPPPSPVPAPPPPPPPTASPTPDKSGSPGKKTSKTSSPGGKK 970
>AB051468-1|BAB21772.1| 1236|Homo sapiens KIAA1681 protein protein.
Length = 1236
Score = 33.5 bits (73), Expect = 1.1
Identities = 16/51 (31%), Positives = 18/51 (35%)
Frame = +2
Query: 494 PPXXKKXXXPPPPXFXXXPPPPXXPRXXXXKKKNXXXARAHXXXXXPGGXK 646
PP PPPP PPPP P K+ + PGG K
Sbjct: 906 PPESSLVFPPPPPSPVPAPPPPPPPTASPTPDKSGSPGKKTSKTSSPGGKK 956
>X66188-1|CAA46956.1| 421|Homo sapiens proacrosin protein.
Length = 421
Score = 31.9 bits (69), Expect = 3.4
Identities = 17/57 (29%), Positives = 18/57 (31%)
Frame = +2
Query: 398 PPXTXPRXXGGXXXPPXFFFFXXXXQXKXKNXPPXXKKXXXPPPPXFXXXPPPPXXP 568
PP T P P Q + PP PPPP PPPP P
Sbjct: 304 PPTTRPPPIRPPFSHPISAHLPWYFQPPPRPLPPRPPAAQPPPPPSPPPPPPPPASP 360
>X54017-1|CAA37964.1| 421|Homo sapiens preproacrosin protein.
Length = 421
Score = 31.9 bits (69), Expect = 3.4
Identities = 17/57 (29%), Positives = 18/57 (31%)
Frame = +2
Query: 398 PPXTXPRXXGGXXXPPXFFFFXXXXQXKXKNXPPXXKKXXXPPPPXFXXXPPPPXXP 568
PP T P P Q + PP PPPP PPPP P
Sbjct: 304 PPTTRPPPIRPPFSHPISAHLPWYFQPPPRPLPPRPPAAQPPPPPSPPPPPPPPASP 360
>M77381-1|AAA51575.1| 184|Homo sapiens acrosin protein.
Length = 184
Score = 31.9 bits (69), Expect = 3.4
Identities = 17/57 (29%), Positives = 18/57 (31%)
Frame = +2
Query: 398 PPXTXPRXXGGXXXPPXFFFFXXXXQXKXKNXPPXXKKXXXPPPPXFXXXPPPPXXP 568
PP T P P Q + PP PPPP PPPP P
Sbjct: 67 PPTTRPPPIRPPFSHPISAHLPWYFQPPPRPLPPRPPAAQPPPPPSPPPPPPPPASP 123
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,397,056
Number of Sequences: 237096
Number of extensions: 2648736
Number of successful extensions: 9643
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7475
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11936890730
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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