Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_O12
(919 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.50
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.50
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.50
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 30 2.7
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 4.7
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 4.7
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 29 6.2
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 29 6.2
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 29 6.2
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 28 8.1
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.3 bits (70), Expect = 0.50
Identities = 22/77 (28%), Positives = 23/77 (29%), Gaps = 3/77 (3%)
Frame = -3
Query: 440 GGXXPPXXXGXXXGAPXKXXKXFXXXGGXKKPPXXLXXGGXPXVX---KKPPXPPXXXXX 270
GG PP G P PP GG P + PP PP
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
Query: 269 XGXSXPPGGTXGGXXXP 219
PPGG GG P
Sbjct: 771 PPPPPPPGGFKGGPPPP 787
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/60 (31%), Positives = 19/60 (31%), Gaps = 3/60 (5%)
Frame = +2
Query: 398 PPXTXPRXXGGXXXPPXFFFFXXXXQXKXKNXPPXXKKXXXPPPPX---FXXXPPPPXXP 568
PP P GG PP PP PPPP F PPPP P
Sbjct: 731 PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.3 bits (70), Expect = 0.50
Identities = 22/77 (28%), Positives = 23/77 (29%), Gaps = 3/77 (3%)
Frame = -3
Query: 440 GGXXPPXXXGXXXGAPXKXXKXFXXXGGXKKPPXXLXXGGXPXVX---KKPPXPPXXXXX 270
GG PP G P PP GG P + PP PP
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
Query: 269 XGXSXPPGGTXGGXXXP 219
PPGG GG P
Sbjct: 771 PPPPPPPGGFKGGPPPP 787
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/60 (31%), Positives = 19/60 (31%), Gaps = 3/60 (5%)
Frame = +2
Query: 398 PPXTXPRXXGGXXXPPXFFFFXXXXQXKXKNXPPXXKKXXXPPPPX---FXXXPPPPXXP 568
PP P GG PP PP PPPP F PPPP P
Sbjct: 731 PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.3 bits (70), Expect = 0.50
Identities = 22/77 (28%), Positives = 23/77 (29%), Gaps = 3/77 (3%)
Frame = -3
Query: 440 GGXXPPXXXGXXXGAPXKXXKXFXXXGGXKKPPXXLXXGGXPXVX---KKPPXPPXXXXX 270
GG PP G P PP GG P + PP PP
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 353
Query: 269 XGXSXPPGGTXGGXXXP 219
PPGG GG P
Sbjct: 354 PPPPPPPGGFKGGPPPP 370
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/60 (31%), Positives = 19/60 (31%), Gaps = 3/60 (5%)
Frame = +2
Query: 398 PPXTXPRXXGGXXXPPXFFFFXXXXQXKXKNXPPXXKKXXXPPPPX---FXXXPPPPXXP 568
PP P GG PP PP PPPP F PPPP P
Sbjct: 314 PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 373
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.9 bits (64), Expect = 2.7
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 494 PPXXKKXXXPPPPXFXXXPPPPXXP 568
PP PPPP PPPP P
Sbjct: 96 PPPPMMGGIPPPPPMFGAPPPPPPP 120
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.1 bits (62), Expect = 4.7
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 494 PPXXKKXXXPPPPXFXXXPPPPXXP 568
PP PPPP PPPP P
Sbjct: 48 PPICPPQFCPPPPMCPPPPPPPPPP 72
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.1 bits (62), Expect = 4.7
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 521 PPPPXFXXXPPPPXXPR 571
PPPP PPPP PR
Sbjct: 74 PPPPPMPCPPPPPPMPR 90
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 494 PPXXKKXXXPPPPXFXXXPPPPXXP 568
PP PPPP PPPP P
Sbjct: 349 PPIISPPAPPPPPPPPPPPPPPQTP 373
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = -3
Query: 551 GGXXKKXGGGXXXFFXXXGGGFXFXXVXXXXKKKXGGGG 435
GG GGG GGGF F + GGGG
Sbjct: 75 GGGGGNYGGGGGNQGGGGGGGFNFNDIGGLINSMGGGGG 113
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = -3
Query: 551 GGXXKKXGGGXXXFFXXXGGGFXFXXVXXXXKKKXGGGG 435
GG GGG GGGF F + GGGG
Sbjct: 100 GGGGGNYGGGGGNQGGGGGGGFNFNDIGGLINSMGGGGG 138
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 28.3 bits (60), Expect = 8.1
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +2
Query: 494 PPXXKKXXXPPPPXFXXXPPPP 559
PP PPPP + PPPP
Sbjct: 88 PPPHGLGPPPPPPHYYTQPPPP 109
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,621,723
Number of Sequences: 27780
Number of extensions: 323340
Number of successful extensions: 1420
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1153
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2349764032
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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