Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_O10
(919 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK091683-1|BAC03720.1| 749|Homo sapiens protein ( Homo sapiens ... 33 1.1
AK056450-1|BAB71186.1| 568|Homo sapiens protein ( Homo sapiens ... 33 1.1
AB051500-1|BAB21804.2| 1652|Homo sapiens KIAA1713 protein protein. 33 1.1
X56597-1|CAA39935.1| 321|Homo sapiens fibrillarin protein. 33 1.9
M59849-1|AAA52453.1| 321|Homo sapiens fibrillarin protein. 33 1.9
CR457069-1|CAG33350.1| 321|Homo sapiens FBL protein. 33 1.9
BT020144-1|AAV38946.1| 321|Homo sapiens fibrillarin protein. 33 1.9
BT006830-1|AAP35476.1| 321|Homo sapiens fibrillarin protein. 33 1.9
BC019260-1|AAH19260.1| 321|Homo sapiens fibrillarin protein. 33 1.9
AC006950-1|AAD15623.1| 227|Homo sapiens FBRL_HUMAN [AA 1- 227] ... 33 1.9
AC005393-3|AAC28913.1| 318|Homo sapiens FBRL_HUMAN protein. 33 1.9
X71428-1|CAA50559.1| 525|Homo sapiens FUS gycline rich protein ... 32 3.4
U36561-1|AAA79948.1| 528|Homo sapiens fus-like protein protein. 32 3.4
S62140-1|AAB27102.1| 526|Homo sapiens TLS protein. 32 3.4
CR456747-1|CAG33028.1| 526|Homo sapiens FUS protein. 32 3.4
BT007131-1|AAP35795.1| 526|Homo sapiens fusion, derived from t(... 32 3.4
BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein. 32 3.4
BC026062-1|AAH26062.1| 526|Homo sapiens fusion (involved in t(1... 32 3.4
BC002459-1|AAH02459.1| 526|Homo sapiens fusion (involved in t(1... 32 3.4
BC000402-1|AAH00402.1| 526|Homo sapiens fusion (involved in t(1... 32 3.4
AJ549096-1|CAD79346.1| 157|Homo sapiens BBF2H7/FUS protein prot... 32 3.4
AF071213-2|AAC35284.1| 525|Homo sapiens FUS/TLS protein protein. 32 3.4
AF071213-1|AAC35285.1| 526|Homo sapiens FUS/TLS protein protein. 32 3.4
AB208902-1|BAD92139.1| 300|Homo sapiens fusion (involved in t(1... 32 3.4
AY260762-1|AAP20225.1| 3567|Homo sapiens zinc finger homeodomain... 31 4.4
AB065557-1|BAC45258.1| 542|Homo sapiens seven transmembrane hel... 31 5.9
>AK091683-1|BAC03720.1| 749|Homo sapiens protein ( Homo sapiens
cDNA FLJ34364 fis, clone FEBRA2015175, weakly similar to
Mus musculus (clone E5.53) Huntington disease (hdh)
gene. ).
Length = 749
Score = 33.5 bits (73), Expect = 1.1
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +1
Query: 562 HXPPPXXXXXPPPXRXPPSPXPXXPXRXXXP 654
H PPP PPP PP P P P P
Sbjct: 654 HPPPPPPPPPPPPLALPPPPPPPPPLPPPLP 684
>AK056450-1|BAB71186.1| 568|Homo sapiens protein ( Homo sapiens
cDNA FLJ31888 fis, clone NT2RP7003055. ).
Length = 568
Score = 33.5 bits (73), Expect = 1.1
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +1
Query: 562 HXPPPXXXXXPPPXRXPPSPXPXXPXRXXXP 654
H PPP PPP PP P P P P
Sbjct: 336 HPPPPPPPPPPPPLALPPPPPPPPPLPPPLP 366
>AB051500-1|BAB21804.2| 1652|Homo sapiens KIAA1713 protein protein.
Length = 1652
Score = 33.5 bits (73), Expect = 1.1
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +1
Query: 562 HXPPPXXXXXPPPXRXPPSPXPXXPXRXXXP 654
H PPP PPP PP P P P P
Sbjct: 1420 HPPPPPPPPPPPPLALPPPPPPPPPLPPPLP 1450
>X56597-1|CAA39935.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 32.7 bits (71), Expect = 1.9
Identities = 19/35 (54%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -2
Query: 918 GGRGXXREGX-RGXGXAGXRXRGRGGXXXGGGGXG 817
GGRG G RG G G R RG GG GGGG G
Sbjct: 25 GGRGGFGGGRGRGGGFRG-RGRGGGGGGGGGGGGG 58
>M59849-1|AAA52453.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 32.7 bits (71), Expect = 1.9
Identities = 19/35 (54%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -2
Query: 918 GGRGXXREGX-RGXGXAGXRXRGRGGXXXGGGGXG 817
GGRG G RG G G R RG GG GGGG G
Sbjct: 25 GGRGGFGGGRGRGGGFRG-RGRGGGGGGGGGGGGG 58
>CR457069-1|CAG33350.1| 321|Homo sapiens FBL protein.
Length = 321
Score = 32.7 bits (71), Expect = 1.9
Identities = 19/35 (54%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -2
Query: 918 GGRGXXREGX-RGXGXAGXRXRGRGGXXXGGGGXG 817
GGRG G RG G G R RG GG GGGG G
Sbjct: 25 GGRGGFGGGRGRGGGFRG-RGRGGGGGGGGGGGGG 58
>BT020144-1|AAV38946.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 32.7 bits (71), Expect = 1.9
Identities = 19/35 (54%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -2
Query: 918 GGRGXXREGX-RGXGXAGXRXRGRGGXXXGGGGXG 817
GGRG G RG G G R RG GG GGGG G
Sbjct: 25 GGRGGFGGGRGRGGGFRG-RGRGGGGGGGGGGGGG 58
>BT006830-1|AAP35476.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 32.7 bits (71), Expect = 1.9
Identities = 19/35 (54%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -2
Query: 918 GGRGXXREGX-RGXGXAGXRXRGRGGXXXGGGGXG 817
GGRG G RG G G R RG GG GGGG G
Sbjct: 25 GGRGGFGGGRGRGGGFRG-RGRGGGGGGGGGGGGG 58
>BC019260-1|AAH19260.1| 321|Homo sapiens fibrillarin protein.
Length = 321
Score = 32.7 bits (71), Expect = 1.9
Identities = 19/35 (54%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -2
Query: 918 GGRGXXREGX-RGXGXAGXRXRGRGGXXXGGGGXG 817
GGRG G RG G G R RG GG GGGG G
Sbjct: 25 GGRGGFGGGRGRGGGFRG-RGRGGGGGGGGGGGGG 58
>AC006950-1|AAD15623.1| 227|Homo sapiens FBRL_HUMAN [AA 1- 227]
protein.
Length = 227
Score = 32.7 bits (71), Expect = 1.9
Identities = 19/35 (54%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -2
Query: 918 GGRGXXREGX-RGXGXAGXRXRGRGGXXXGGGGXG 817
GGRG G RG G G R RG GG GGGG G
Sbjct: 25 GGRGGFGGGRGRGGGFRG-RGRGGGGGGGGGGGGG 58
>AC005393-3|AAC28913.1| 318|Homo sapiens FBRL_HUMAN protein.
Length = 318
Score = 32.7 bits (71), Expect = 1.9
Identities = 19/35 (54%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = -2
Query: 918 GGRGXXREGX-RGXGXAGXRXRGRGGXXXGGGGXG 817
GGRG G RG G G R RG GG GGGG G
Sbjct: 22 GGRGGFGGGRGRGGGFRG-RGRGGGGGGGGGGGGG 55
>X71428-1|CAA50559.1| 525|Homo sapiens FUS gycline rich protein
protein.
Length = 525
Score = 31.9 bits (69), Expect = 3.4
Identities = 17/35 (48%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = -2
Query: 918 GGRGXXRE-GXRGXGXAGXRXRGRGGXXXGGGGXG 817
GGRG G G G G GRGG GGGG G
Sbjct: 383 GGRGRGGPMGRGGYGGGGSGGGGRGGFPSGGGGGG 417
>U36561-1|AAA79948.1| 528|Homo sapiens fus-like protein protein.
Length = 528
Score = 31.9 bits (69), Expect = 3.4
Identities = 17/35 (48%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = -2
Query: 918 GGRGXXRE-GXRGXGXAGXRXRGRGGXXXGGGGXG 817
GGRG G G G G GRGG GGGG G
Sbjct: 387 GGRGRGGPMGRGGYGGGGSGGGGRGGFPSGGGGGG 421
>S62140-1|AAB27102.1| 526|Homo sapiens TLS protein.
Length = 526
Score = 31.9 bits (69), Expect = 3.4
Identities = 17/35 (48%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = -2
Query: 918 GGRGXXRE-GXRGXGXAGXRXRGRGGXXXGGGGXG 817
GGRG G G G G GRGG GGGG G
Sbjct: 384 GGRGRGGPMGRGGYGGGGSGGGGRGGFPSGGGGGG 418
>CR456747-1|CAG33028.1| 526|Homo sapiens FUS protein.
Length = 526
Score = 31.9 bits (69), Expect = 3.4
Identities = 17/35 (48%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = -2
Query: 918 GGRGXXRE-GXRGXGXAGXRXRGRGGXXXGGGGXG 817
GGRG G G G G GRGG GGGG G
Sbjct: 384 GGRGRGGPMGRGGYGGGGSGGGGRGGFPSGGGGGG 418
>BT007131-1|AAP35795.1| 526|Homo sapiens fusion, derived from
t(12;16) malignant liposarcoma protein.
Length = 526
Score = 31.9 bits (69), Expect = 3.4
Identities = 17/35 (48%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = -2
Query: 918 GGRGXXRE-GXRGXGXAGXRXRGRGGXXXGGGGXG 817
GGRG G G G G GRGG GGGG G
Sbjct: 384 GGRGRGGPMGRGGYGGGGSGGGGRGGFPSGGGGGG 418
>BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein.
Length = 673
Score = 31.9 bits (69), Expect = 3.4
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +1
Query: 568 PPPXXXXXPPPXRXPPSPXPXXPXRXXXP 654
PPP PPP + PP P P P P
Sbjct: 70 PPPPPPPPPPPQQPPPPPPPPSPGASYPP 98
>BC026062-1|AAH26062.1| 526|Homo sapiens fusion (involved in
t(12;16) in malignant liposarcoma) protein.
Length = 526
Score = 31.9 bits (69), Expect = 3.4
Identities = 17/35 (48%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = -2
Query: 918 GGRGXXRE-GXRGXGXAGXRXRGRGGXXXGGGGXG 817
GGRG G G G G GRGG GGGG G
Sbjct: 384 GGRGRGGPMGRGGYGGGGSGGGGRGGFPSGGGGGG 418
>BC002459-1|AAH02459.1| 526|Homo sapiens fusion (involved in
t(12;16) in malignant liposarcoma) protein.
Length = 526
Score = 31.9 bits (69), Expect = 3.4
Identities = 17/35 (48%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = -2
Query: 918 GGRGXXRE-GXRGXGXAGXRXRGRGGXXXGGGGXG 817
GGRG G G G G GRGG GGGG G
Sbjct: 384 GGRGRGGPMGRGGYGGGGSGGGGRGGFPSGGGGGG 418
>BC000402-1|AAH00402.1| 526|Homo sapiens fusion (involved in
t(12;16) in malignant liposarcoma) protein.
Length = 526
Score = 31.9 bits (69), Expect = 3.4
Identities = 17/35 (48%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = -2
Query: 918 GGRGXXRE-GXRGXGXAGXRXRGRGGXXXGGGGXG 817
GGRG G G G G GRGG GGGG G
Sbjct: 384 GGRGRGGPMGRGGYGGGGSGGGGRGGFPSGGGGGG 418
>AJ549096-1|CAD79346.1| 157|Homo sapiens BBF2H7/FUS protein
protein.
Length = 157
Score = 31.9 bits (69), Expect = 3.4
Identities = 17/35 (48%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = -2
Query: 918 GGRGXXRE-GXRGXGXAGXRXRGRGGXXXGGGGXG 817
GGRG G G G G GRGG GGGG G
Sbjct: 117 GGRGRGGPMGRGGYGGGGSGGGGRGGFPSGGGGGG 151
>AF071213-2|AAC35284.1| 525|Homo sapiens FUS/TLS protein protein.
Length = 525
Score = 31.9 bits (69), Expect = 3.4
Identities = 17/35 (48%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = -2
Query: 918 GGRGXXRE-GXRGXGXAGXRXRGRGGXXXGGGGXG 817
GGRG G G G G GRGG GGGG G
Sbjct: 383 GGRGRGGPMGRGGYGGGGSGGGGRGGFPSGGGGGG 417
>AF071213-1|AAC35285.1| 526|Homo sapiens FUS/TLS protein protein.
Length = 526
Score = 31.9 bits (69), Expect = 3.4
Identities = 17/35 (48%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = -2
Query: 918 GGRGXXRE-GXRGXGXAGXRXRGRGGXXXGGGGXG 817
GGRG G G G G GRGG GGGG G
Sbjct: 384 GGRGRGGPMGRGGYGGGGSGGGGRGGFPSGGGGGG 418
>AB208902-1|BAD92139.1| 300|Homo sapiens fusion (involved in
t(12;16) in malignant liposarcoma) isoform a variant
protein.
Length = 300
Score = 31.9 bits (69), Expect = 3.4
Identities = 17/35 (48%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = -2
Query: 918 GGRGXXRE-GXRGXGXAGXRXRGRGGXXXGGGGXG 817
GGRG G G G G GRGG GGGG G
Sbjct: 158 GGRGRGGPMGRGGYGGGGSGGGGRGGFPSGGGGGG 192
>AY260762-1|AAP20225.1| 3567|Homo sapiens zinc finger homeodomain 4
protein protein.
Length = 3567
Score = 31.5 bits (68), Expect = 4.4
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +1
Query: 568 PPPXXXXXPPPXRXPPSPXPXXPXRXXXP 654
PPP PPP PP P P P + P
Sbjct: 1997 PPPPPPPPPPPPPPPPPPPPSAPPQVQLP 2025
>AB065557-1|BAC45258.1| 542|Homo sapiens seven transmembrane helix
receptor protein.
Length = 542
Score = 31.1 bits (67), Expect = 5.9
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -2
Query: 918 GGRGXXREGXRGXGXAGXRXRGRGGXXXGGGGXG 817
GGR R+G R G G + GR G GG G
Sbjct: 39 GGRAAGRQGGRAAGWQGGKAAGRRGGEARGGARG 72
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,964,978
Number of Sequences: 237096
Number of extensions: 671190
Number of successful extensions: 12514
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 2968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8744
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11936890730
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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