Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_O10
(919 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82064-2|CAI79180.1| 167|Caenorhabditis elegans Hypothetical pr... 36 0.031
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 33 0.22
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 33 0.29
U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical pr... 33 0.38
U29096-1|AAA68406.1| 105|Caenorhabditis elegans Neuropeptide-li... 32 0.50
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 32 0.66
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 32 0.66
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 31 1.2
AF098992-4|AAK73869.2| 250|Caenorhabditis elegans Hypothetical ... 30 2.0
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 30 2.7
AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical ... 30 2.7
Z81525-8|CAB04257.1| 208|Caenorhabditis elegans Hypothetical pr... 29 3.5
U42436-10|AAF99899.1| 272|Caenorhabditis elegans Ribosomal prot... 29 3.5
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 29 4.7
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 29 6.2
AF043700-5|AAB97575.2| 573|Caenorhabditis elegans Lipid deplete... 29 6.2
Z70783-9|CAA94857.2| 455|Caenorhabditis elegans Hypothetical pr... 28 8.1
U52003-5|AAG00057.1| 730|Caenorhabditis elegans P granule abnor... 28 8.1
U52003-4|ABB51171.1| 771|Caenorhabditis elegans P granule abnor... 28 8.1
AF077868-1|AAC36100.1| 730|Caenorhabditis elegans PGL-1 protein. 28 8.1
>Z82064-2|CAI79180.1| 167|Caenorhabditis elegans Hypothetical
protein W02B9.2 protein.
Length = 167
Score = 36.3 bits (80), Expect = 0.031
Identities = 19/36 (52%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = -2
Query: 918 GGRGXXREGXRGXGXAGXRX--RGRGGXXXGGGGXG 817
G RG R G RG G R RGRGG GGGG G
Sbjct: 100 GDRGGDRGGDRGGDRGGDRGGRRGRGGYRDGGGGRG 135
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = -2
Query: 918 GGRGXXREGXRGXGXAGXRXRGRGGXXXGGGG 823
GGRG R G RG G R RGG G G
Sbjct: 84 GGRGGGRGGDRGGDRGGDRGGDRGGDRGGDRG 115
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = -2
Query: 918 GGRGXXREGXRGXGXAGXRXRGRGGXXXGGGG 823
GGRG R G RG G R RGG G G
Sbjct: 88 GGRGGDRGGDRGGDRGGDRGGDRGGDRGGDRG 119
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 33.5 bits (73), Expect = 0.22
Identities = 16/34 (47%), Positives = 16/34 (47%)
Frame = -2
Query: 918 GGRGXXREGXRGXGXAGXRXRGRGGXXXGGGGXG 817
GG G G G G R R RGG GGGG G
Sbjct: 222 GGGGGYGSGGGWGGGGGGRDRDRGGWGGGGGGRG 255
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 33.1 bits (72), Expect = 0.29
Identities = 17/34 (50%), Positives = 17/34 (50%)
Frame = -2
Query: 918 GGRGXXREGXRGXGXAGXRXRGRGGXXXGGGGXG 817
G RG G RG G G GRGG GGGG G
Sbjct: 19 GSRGGYGGGGRGGGGGGYSG-GRGGGYGGGGGGG 51
>U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical
protein F07C4.7 protein.
Length = 180
Score = 32.7 bits (71), Expect = 0.38
Identities = 16/34 (47%), Positives = 16/34 (47%)
Frame = -2
Query: 918 GGRGXXREGXRGXGXAGXRXRGRGGXXXGGGGXG 817
GGRG G G G G GRGG G GG G
Sbjct: 113 GGRGGNGGGRGGTGGFGDNGGGRGGNGGGRGGNG 146
Score = 31.5 bits (68), Expect = 0.87
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = -2
Query: 918 GGRGXXREGXRGXGXAGXRXRGRGGXXXGGGG 823
GGRG R G G G G G GG G GG
Sbjct: 76 GGRGGGRGGNGGFGDNGGLRGGNGGGRGGNGG 107
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -2
Query: 918 GGRGXXREGXRGXGXAGXRXRGRGGXXXGGGG 823
GG G R G G G G G GG G GG
Sbjct: 116 GGNGGGRGGTGGFGDNGGGRGGNGGGRGGNGG 147
>U29096-1|AAA68406.1| 105|Caenorhabditis elegans Neuropeptide-like
protein protein32 protein.
Length = 105
Score = 32.3 bits (70), Expect = 0.50
Identities = 19/36 (52%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = -2
Query: 918 GGRGXX-REGXRGXGXAGXRXRGRGGXX-XGGGGXG 817
GGRG R G RG G G GRGG GGGG G
Sbjct: 59 GGRGGWGRGGGRGYGGRGGGWGGRGGGWGRGGGGRG 94
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 31.9 bits (69), Expect = 0.66
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -2
Query: 918 GGRGXXREGXRGXGXAGXRXRGRGGXXXGGGGXG 817
GG G ++G G G G+GG GGGG G
Sbjct: 168 GGWGGSQDGGSQGGWGGQNGGGQGGNQGGGGGRG 201
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/37 (48%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
Frame = -2
Query: 918 GGRGXXR---EGXRGXGXAGXRXRGRGGXXXGGGGXG 817
GGRG R G RG G G R G GG GG G G
Sbjct: 54 GGRGGGRGGSGGGRGGGSGGGRG-GSGGAGAGGSGSG 89
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 31.9 bits (69), Expect = 0.66
Identities = 17/34 (50%), Positives = 17/34 (50%)
Frame = -2
Query: 918 GGRGXXREGXRGXGXAGXRXRGRGGXXXGGGGXG 817
GGRG G G G G GRGG GGGG G
Sbjct: 92 GGRGGGGGGGGGRGGGGG---GRGGGGGGGGGRG 122
Score = 31.5 bits (68), Expect = 0.87
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = -2
Query: 918 GGRGXXREGXRGXGXAGXRXRGRGGXXXGGGGXG 817
GG G G G G G GRGG G GG G
Sbjct: 82 GGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGG 115
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -2
Query: 915 GRGXXREGXRGXGXAGXRXRGRGGXXXGGGGXG 817
G G R G G G G GG GGGG G
Sbjct: 63 GWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRG 95
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/34 (47%), Positives = 16/34 (47%)
Frame = -2
Query: 918 GGRGXXREGXRGXGXAGXRXRGRGGXXXGGGGXG 817
GGRG G G G G G GG GGGG G
Sbjct: 102 GGRGGGGGGRGGGGGGGGGRGGGGGG-RGGGGRG 134
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -2
Query: 918 GGRGXXREGXRGXGXAGXRXRGRGGXXXGGGGXG 817
GG G G G G G G G GGGG G
Sbjct: 87 GGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGG 120
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -3
Query: 635 GXXGXGXGGXRXGGGXXXXXGGGXW 561
G G G GG R GGG GGG W
Sbjct: 58 GGGGSGWGGGR-GGGWGNNGGGGNW 81
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/26 (57%), Positives = 15/26 (57%)
Frame = -2
Query: 894 GXRGXGXAGXRXRGRGGXXXGGGGXG 817
G RG G G RGRGG GGGG G
Sbjct: 812 GGRGGGFGGT-GRGRGGGVFGGGGRG 836
>AF098992-4|AAK73869.2| 250|Caenorhabditis elegans Hypothetical
protein F53C3.6a protein.
Length = 250
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/36 (50%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = -2
Query: 918 GGRGXXREGXRGXGXAGXRXR--GRGGXXXGGGGXG 817
GGRG G G G +G R GRGG GGGG G
Sbjct: 23 GGRGRGGGGG-GRGSSGARGGVGGRGGGGRGGGGGG 57
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = -2
Query: 918 GGRGXXREGXRGXGXAGXRXRGRGGXXXGGGGXG 817
GGRG G G G R RGG G GG G
Sbjct: 89 GGRGGFGGSRGGGGYDGGRGGSRGGYDGGRGGYG 122
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = -2
Query: 918 GGRGXXREGXRGXGXAGXRXRGRGGXXXGGG 826
G RG R G RG G R RGG GGG
Sbjct: 359 GFRGGDRGGFRGGDRGGDRGGFRGGRGVGGG 389
>AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical
protein Y66H1A.4 protein.
Length = 244
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/33 (48%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = -2
Query: 918 GGRGXXREGXRG-XGXAGXRXRGRGGXXXGGGG 823
GGRG G G G G GRGG GGGG
Sbjct: 151 GGRGRGGRGRGGDRGGRGSDRGGRGGFGRGGGG 183
>Z81525-8|CAB04257.1| 208|Caenorhabditis elegans Hypothetical
protein F33A8.3 protein.
Length = 208
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/37 (48%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
Frame = -2
Query: 918 GGRGXXRE--GXRGXGXAGX-RXRGRGGXXXGGGGXG 817
GGRG R G R G R GRGG GGGG G
Sbjct: 122 GGRGGIRHDSGSRDAEEGGAPRGGGRGGSRRGGGGRG 158
>U42436-10|AAF99899.1| 272|Caenorhabditis elegans Ribosomal
protein, small subunitprotein 2 protein.
Length = 272
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/34 (50%), Positives = 17/34 (50%)
Frame = -2
Query: 918 GGRGXXREGXRGXGXAGXRXRGRGGXXXGGGGXG 817
GGRG R G R AG R GRGG GG G
Sbjct: 12 GGRGGGRGGAR---PAGDRPAGRGGRGGRGGRGG 42
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -3
Query: 653 GXXXRXGXXGXGXGGXRXGGGXXXXXGGG 567
G G G G GG R GGG GGG
Sbjct: 596 GGGGNGGGGGFGGGGQRSGGGGGFQSGGG 624
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -2
Query: 918 GGRGXXREGXRGXGXAGXRXRGRGGXXXGGGGXG 817
GGRG G G G GG GGGG G
Sbjct: 139 GGRGGDGRGPPGSNGGGDWGGNGGGGRGGGGGRG 172
>AF043700-5|AAB97575.2| 573|Caenorhabditis elegans Lipid depleted
protein 6 protein.
Length = 573
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/37 (45%), Positives = 17/37 (45%), Gaps = 4/37 (10%)
Frame = -2
Query: 915 GRGXXREGXRGXGXAGXRXRG----RGGXXXGGGGXG 817
GRG R G RG G RG RGG GGG G
Sbjct: 464 GRGGDRGGFRGRDRDGGGFRGRSVDRGGFRGGGGDRG 500
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -2
Query: 909 GXXREGXRGXGXAGXRXRGRGGXXXGGGGXG 817
G R G G G G R RGG GGG G
Sbjct: 525 GGFRGGFGGRGGGGFRGGDRGGFRGRGGGGG 555
>Z70783-9|CAA94857.2| 455|Caenorhabditis elegans Hypothetical
protein ZK856.9 protein.
Length = 455
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/32 (50%), Positives = 16/32 (50%)
Frame = -2
Query: 918 GGRGXXREGXRGXGXAGXRXRGRGGXXXGGGG 823
GG G R G G G G R RGG GGGG
Sbjct: 360 GGVGNQRFGGGGRGRGG-RGFHRGGANRGGGG 390
>U52003-5|AAG00057.1| 730|Caenorhabditis elegans P granule
abnormality protein 1,isoform a protein.
Length = 730
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = -2
Query: 918 GGRGXXREGXRGXGXAGXRXRGRGGXXXGGGGXG 817
GGRG G RG RGRGG GG G
Sbjct: 696 GGRGGYGGGDRGGRGGYGGDRGRGGYGGRGGRGG 729
>U52003-4|ABB51171.1| 771|Caenorhabditis elegans P granule
abnormality protein 1,isoform b protein.
Length = 771
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = -2
Query: 918 GGRGXXREGXRGXGXAGXRXRGRGGXXXGGGGXG 817
GGRG G RG RGRGG GG G
Sbjct: 737 GGRGGYGGGDRGGRGGYGGDRGRGGYGGRGGRGG 770
>AF077868-1|AAC36100.1| 730|Caenorhabditis elegans PGL-1 protein.
Length = 730
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = -2
Query: 918 GGRGXXREGXRGXGXAGXRXRGRGGXXXGGGGXG 817
GGRG G RG RGRGG GG G
Sbjct: 696 GGRGGYGGGDRGGRGGYGGDRGRGGYGGRGGRGG 729
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,144,960
Number of Sequences: 27780
Number of extensions: 76716
Number of successful extensions: 1607
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 410
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1255
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2349764032
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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