Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_O09
         (911 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49067-1|CAA88849.2|  376|Caenorhabditis elegans Hypothetical pr...    33   0.37 
Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical pr...    30   2.6  
Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical pr...    30   2.6  
AL132876-2|CAB60843.3|  534|Caenorhabditis elegans Hypothetical ...    29   3.5  
AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical ...    29   4.6  
Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical p...    28   8.1  
Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical pr...    28   8.1  

>Z49067-1|CAA88849.2|  376|Caenorhabditis elegans Hypothetical
           protein C44F1.2 protein.
          Length = 376

 Score = 32.7 bits (71), Expect = 0.37
 Identities = 21/58 (36%), Positives = 31/58 (53%)
 Frame = -3

Query: 243 NQRNSRVVIGSGDSIDEPRFRSGRSGQNVNVQVNKTGAGRQHAGREKHQKLHLDSLGS 70
           N+R+   V+ SGD   EP  +S  SGQ     + K G GR  AG++   KL ++ + S
Sbjct: 174 NKRHLEDVLASGDDASEPTEQS--SGQISEEPIKKRGRGRP-AGKKNKAKLEINFVES 228


>Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical protein
            R10E11.1b protein.
          Length = 2056

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 2/97 (2%)
 Frame = -3

Query: 372  DDFLTLPD--PQFVGEL*NIPIAVSDEIVDGILDDASTRLFLEQQNQRNSRVVIGSGDSI 199
            DD LT P   P F G+    P  + D I +   ++A  ++  +  +  ++   +G GDS 
Sbjct: 1319 DDNLTTPTQLPYFEGDF--WPNVIEDCIREASNEEAQRKVKEDDDDGEDADGGLGGGDSG 1376

Query: 198  DEPRFRSGRSGQNVNVQVNKTGAGRQHAGREKHQKLH 88
             +   ++ ++    N ++NK  AG    G E   KL+
Sbjct: 1377 KKKSSKNKKNNLKKNAKMNKKKAG-SITGNEVADKLY 1412


>Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical protein
            R10E11.1a protein.
          Length = 2045

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 2/97 (2%)
 Frame = -3

Query: 372  DDFLTLPD--PQFVGEL*NIPIAVSDEIVDGILDDASTRLFLEQQNQRNSRVVIGSGDSI 199
            DD LT P   P F G+    P  + D I +   ++A  ++  +  +  ++   +G GDS 
Sbjct: 1308 DDNLTTPTQLPYFEGDF--WPNVIEDCIREASNEEAQRKVKEDDDDGEDADGGLGGGDSG 1365

Query: 198  DEPRFRSGRSGQNVNVQVNKTGAGRQHAGREKHQKLH 88
             +   ++ ++    N ++NK  AG    G E   KL+
Sbjct: 1366 KKKSSKNKKNNLKKNAKMNKKKAG-SITGNEVADKLY 1401


>AL132876-2|CAB60843.3|  534|Caenorhabditis elegans Hypothetical
           protein Y105E8A.2 protein.
          Length = 534

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +3

Query: 546 KVDSSLGRTTGFTSRSTVFRXPPILETWN 632
           K+D S+     FTS S   + PP LET N
Sbjct: 27  KIDDSIHYYVSFTSDSVTIKDPPTLETGN 55


>AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical
           protein M01E10.2 protein.
          Length = 1286

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 20/66 (30%), Positives = 25/66 (37%)
 Frame = +3

Query: 690 TPTXXQLVPESPAKPPTTQVLFLNLTTGQLQSXPLXXLPXSFPQGTGKXTXPFXQAPXXR 869
           TP   Q  P +   PPTTQ      +T Q         P + P  T + T P  QAP   
Sbjct: 367 TPPTIQTPPPTTQTPPTTQ----TSSTTQTPRTKQTWAPWTPPTTTTRQTPPTTQAPPIT 422

Query: 870 XQRFNP 887
              + P
Sbjct: 423 PPPYRP 428


>Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical
            protein C28A5.6 protein.
          Length = 1061

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
 Frame = +3

Query: 420  NVKIINXRDXLAIKLGAA----ADSDNEQNRIRAMPTNKSSENVSWKVDSSLGRTTG 578
            N+  ++ +D +A+  G+     +D D+E+N        K    + W+V S   +TTG
Sbjct: 988  NLVALSVKDEVALSSGSEVEPLSDIDSEENLAIIKRLEKREMEIGWEVSSEREKTTG 1044


>Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical protein
            C28A5.6 protein.
          Length = 1061

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
 Frame = +3

Query: 420  NVKIINXRDXLAIKLGAA----ADSDNEQNRIRAMPTNKSSENVSWKVDSSLGRTTG 578
            N+  ++ +D +A+  G+     +D D+E+N        K    + W+V S   +TTG
Sbjct: 988  NLVALSVKDEVALSSGSEVEPLSDIDSEENLAIIKRLEKREMEIGWEVSSEREKTTG 1044


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,318,226
Number of Sequences: 27780
Number of extensions: 412599
Number of successful extensions: 935
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 935
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2328783996
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)