Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_O03
         (1081 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    26   1.7  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    26   1.7  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           24   9.0  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    24   9.0  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 26.2 bits (55), Expect = 1.7
 Identities = 12/26 (46%), Positives = 12/26 (46%)
 Frame = +2

Query: 692 GGXXPFXGGGXXPPPXXXXXGGXGGR 769
           GG  P  GGG    P     GG GGR
Sbjct: 208 GGGAPGGGGGSSGGPGPGGGGGGGGR 233


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 26.2 bits (55), Expect = 1.7
 Identities = 12/28 (42%), Positives = 12/28 (42%)
 Frame = -2

Query: 771 GRPPXPPXXXXXGGGXXPPPXXGXXPPP 688
           G P  PP      G   PPP  G  PPP
Sbjct: 94  GMPGAPPLLMGPNG-PLPPPMMGMRPPP 120


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 23.8 bits (49), Expect = 9.0
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +2

Query: 713  GGGXXPPPXXXXXGGXGGRPP 775
            G G   PP     GG GG+ P
Sbjct: 1409 GSGRSKPPGPEGVGGGGGKSP 1429


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 23.8 bits (49), Expect = 9.0
 Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +3

Query: 285 PIXRGNLKGXK-KVXNSRPLGPPGRTGLKKKTFGAPNGLEPG 407
           P+    L G + +  NS P+GPPG  G +    GAP GL PG
Sbjct: 52  PVGPRGLTGHRGEKGNSGPVGPPGAPG-RDGMPGAP-GL-PG 90


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 784,877
Number of Sequences: 2352
Number of extensions: 14229
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 120863106
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)