Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_O03
(1081 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 38 0.012
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 38 0.012
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 38 0.012
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 33 0.35
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.47
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.47
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.47
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.4
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.4
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 31 1.9
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 31 1.9
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 31 1.9
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 31 1.9
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 30 3.3
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 4.3
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z82055-6|CAB04851.1| 365|Caenorhabditis elegans Hypothetical pr... 29 7.6
Z77667-7|CAB01238.2| 534|Caenorhabditis elegans Hypothetical pr... 29 7.6
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 29 7.6
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 37.9 bits (84), Expect = 0.012
Identities = 24/92 (26%), Positives = 24/92 (26%)
Frame = -2
Query: 963 PRGXSXPPXXXXKKEXKXXGGGGGXXVFXPXGPXGGXXKXXGXXPXXXPKKKXVXXXPXX 784
P S PP K G G P P P P
Sbjct: 232 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 291
Query: 783 XXGGGRPPXPPXXXXXGGGXXPPPXXGXXPPP 688
G PP PP G PPP G PPP
Sbjct: 292 PRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 323
Score = 29.9 bits (64), Expect = 3.3
Identities = 17/58 (29%), Positives = 19/58 (32%)
Frame = -1
Query: 859 GXXKKXXGXPPGXSXKKKXXXXXPXXXGGGAPXXPPXXXXXXGGXXTPPXKXGXPPPP 686
G K P G P G G+P PP PP + G PPPP
Sbjct: 224 GFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPP------AAGSPPPPRTGSPPPP 275
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 37.9 bits (84), Expect = 0.012
Identities = 24/92 (26%), Positives = 24/92 (26%)
Frame = -2
Query: 963 PRGXSXPPXXXXKKEXKXXGGGGGXXVFXPXGPXGGXXKXXGXXPXXXPKKKXVXXXPXX 784
P S PP K G G P P P P
Sbjct: 253 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 312
Query: 783 XXGGGRPPXPPXXXXXGGGXXPPPXXGXXPPP 688
G PP PP G PPP G PPP
Sbjct: 313 PRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 344
Score = 29.9 bits (64), Expect = 3.3
Identities = 17/58 (29%), Positives = 19/58 (32%)
Frame = -1
Query: 859 GXXKKXXGXPPGXSXKKKXXXXXPXXXGGGAPXXPPXXXXXXGGXXTPPXKXGXPPPP 686
G K P G P G G+P PP PP + G PPPP
Sbjct: 245 GFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPP------AAGSPPPPRTGSPPPP 296
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 37.9 bits (84), Expect = 0.012
Identities = 24/92 (26%), Positives = 24/92 (26%)
Frame = -2
Query: 963 PRGXSXPPXXXXKKEXKXXGGGGGXXVFXPXGPXGGXXKXXGXXPXXXPKKKXVXXXPXX 784
P S PP K G G P P P P
Sbjct: 238 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 297
Query: 783 XXGGGRPPXPPXXXXXGGGXXPPPXXGXXPPP 688
G PP PP G PPP G PPP
Sbjct: 298 PRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 329
Score = 29.9 bits (64), Expect = 3.3
Identities = 17/58 (29%), Positives = 19/58 (32%)
Frame = -1
Query: 859 GXXKKXXGXPPGXSXKKKXXXXXPXXXGGGAPXXPPXXXXXXGGXXTPPXKXGXPPPP 686
G K P G P G G+P PP PP + G PPPP
Sbjct: 230 GFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPP------AAGSPPPPRTGSPPPP 281
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 33.1 bits (72), Expect = 0.35
Identities = 16/35 (45%), Positives = 16/35 (45%)
Frame = -2
Query: 792 PXXXXGGGRPPXPPXXXXXGGGXXPPPXXGXXPPP 688
P GG PP PP GG PPP G PPP
Sbjct: 86 PPPMFAGGIPPPPPMM---GGIPPPPPMFGAPPPP 117
Score = 32.7 bits (71), Expect = 0.47
Identities = 16/35 (45%), Positives = 16/35 (45%)
Frame = -2
Query: 792 PXXXXGGGRPPXPPXXXXXGGGXXPPPXXGXXPPP 688
P GG PP PP GG PPP G PPP
Sbjct: 75 PPPPGPGGIPPPPPMFA--GGIPPPPPMMGGIPPP 107
Score = 31.5 bits (68), Expect = 1.1
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -1
Query: 790 PXXXGGGAPXXPPXXXXXXGGXXTPPXKXGXPPPP 686
P GG P PP GG PP G PPPP
Sbjct: 87 PPMFAGGIPPPPPMM----GGIPPPPPMFGAPPPP 117
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.7 bits (71), Expect = 0.47
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 771 GRPPXPPXXXXXGGGXXPPPXXGXXPP 691
G PP PP GG PPP G PP
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPP 737
Score = 32.7 bits (71), Expect = 0.47
Identities = 20/58 (34%), Positives = 20/58 (34%)
Frame = +2
Query: 620 PPPXXPPXXXXXXXTXKXXXXXXGGGXXPFXGGGXXPPPXXXXXGGXGGRPPPXXXXG 793
PPP PP T GG P GG PPP GG PPP G
Sbjct: 715 PPPGLPPI------TGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 766
Score = 32.3 bits (70), Expect = 0.62
Identities = 21/66 (31%), Positives = 21/66 (31%), Gaps = 9/66 (13%)
Frame = +2
Query: 623 PPXXPPXXXXXXXTXKXXXXXXGGGXXPFXGG---------GXXPPPXXXXXGGXGGRPP 775
PP PP T GG P GG G PPP GG G PP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Query: 776 PXXXXG 793
P G
Sbjct: 786 PPPPPG 791
Score = 31.9 bits (69), Expect = 0.81
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 3/32 (9%)
Frame = -2
Query: 774 GGRPPXPPXXXXX---GGGXXPPPXXGXXPPP 688
GG PP PP GG PPP G PPP
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
Score = 31.5 bits (68), Expect = 1.1
Identities = 22/68 (32%), Positives = 22/68 (32%), Gaps = 6/68 (8%)
Frame = -2
Query: 876 PXGPXGGXXKXXGXXPXXXPKKKXVXXX----PXXXXGGGRPPXPPXXXXXG--GGXXPP 715
P P GG G P P P GG PP PP G GG PP
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Query: 714 PXXGXXPP 691
P G P
Sbjct: 788 PPPGMFAP 795
Score = 29.9 bits (64), Expect = 3.3
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Frame = -2
Query: 777 GGGRPPXPP-XXXXXGGGXXPPPXXGXXPP 691
GG PP PP GG PPP G PP
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPP 753
Score = 29.5 bits (63), Expect = 4.3
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +1
Query: 994 PPPGGXXXFFFXPPPPPXXXXXXXXRPP 1077
PPPGG PPPPP PP
Sbjct: 746 PPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Score = 29.1 bits (62), Expect = 5.7
Identities = 24/101 (23%), Positives = 25/101 (24%)
Frame = +1
Query: 601 KKKXKXPXPXXPPXXXXXXXNPKTXXKXXGGGXXPXXGGGXXXPPXXXXTRGXGXAPPPP 780
+K P PP P T G P GG PP G PPPP
Sbjct: 675 RKHINDPKIPLPPPTKMNLSAPST--SAGGSSALPPITGGPPPPPGLPPITGGPPPPPPP 732
Query: 781 XXXGXXXNXFFFXXXXGXXPXXFXXXPPXXXGXKXXXXPPP 903
G P PP PPP
Sbjct: 733 GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Score = 28.7 bits (61), Expect = 7.6
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -2
Query: 774 GGRPPXPPXXXXXGGGXXPPPXXGXXP 694
GG PP P GG PPP G P
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPP 737
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.7 bits (71), Expect = 0.47
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 771 GRPPXPPXXXXXGGGXXPPPXXGXXPP 691
G PP PP GG PPP G PP
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPP 737
Score = 32.7 bits (71), Expect = 0.47
Identities = 20/58 (34%), Positives = 20/58 (34%)
Frame = +2
Query: 620 PPPXXPPXXXXXXXTXKXXXXXXGGGXXPFXGGGXXPPPXXXXXGGXGGRPPPXXXXG 793
PPP PP T GG P GG PPP GG PPP G
Sbjct: 715 PPPGLPPI------TGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 766
Score = 32.3 bits (70), Expect = 0.62
Identities = 21/66 (31%), Positives = 21/66 (31%), Gaps = 9/66 (13%)
Frame = +2
Query: 623 PPXXPPXXXXXXXTXKXXXXXXGGGXXPFXGG---------GXXPPPXXXXXGGXGGRPP 775
PP PP T GG P GG G PPP GG G PP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Query: 776 PXXXXG 793
P G
Sbjct: 786 PPPPPG 791
Score = 31.9 bits (69), Expect = 0.81
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 3/32 (9%)
Frame = -2
Query: 774 GGRPPXPPXXXXX---GGGXXPPPXXGXXPPP 688
GG PP PP GG PPP G PPP
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
Score = 31.5 bits (68), Expect = 1.1
Identities = 22/68 (32%), Positives = 22/68 (32%), Gaps = 6/68 (8%)
Frame = -2
Query: 876 PXGPXGGXXKXXGXXPXXXPKKKXVXXX----PXXXXGGGRPPXPPXXXXXG--GGXXPP 715
P P GG G P P P GG PP PP G GG PP
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Query: 714 PXXGXXPP 691
P G P
Sbjct: 788 PPPGMFAP 795
Score = 29.9 bits (64), Expect = 3.3
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Frame = -2
Query: 777 GGGRPPXPP-XXXXXGGGXXPPPXXGXXPP 691
GG PP PP GG PPP G PP
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPP 753
Score = 29.5 bits (63), Expect = 4.3
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +1
Query: 994 PPPGGXXXFFFXPPPPPXXXXXXXXRPP 1077
PPPGG PPPPP PP
Sbjct: 746 PPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Score = 29.1 bits (62), Expect = 5.7
Identities = 24/101 (23%), Positives = 25/101 (24%)
Frame = +1
Query: 601 KKKXKXPXPXXPPXXXXXXXNPKTXXKXXGGGXXPXXGGGXXXPPXXXXTRGXGXAPPPP 780
+K P PP P T G P GG PP G PPPP
Sbjct: 675 RKHINDPKIPLPPPTKMNLSAPST--SAGGSSALPPITGGPPPPPGLPPITGGPPPPPPP 732
Query: 781 XXXGXXXNXFFFXXXXGXXPXXFXXXPPXXXGXKXXXXPPP 903
G P PP PPP
Sbjct: 733 GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Score = 28.7 bits (61), Expect = 7.6
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -2
Query: 774 GGRPPXPPXXXXXGGGXXPPPXXGXXP 694
GG PP P GG PPP G P
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPP 737
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.7 bits (71), Expect = 0.47
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 771 GRPPXPPXXXXXGGGXXPPPXXGXXPP 691
G PP PP GG PPP G PP
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPPGGLPP 320
Score = 32.7 bits (71), Expect = 0.47
Identities = 20/58 (34%), Positives = 20/58 (34%)
Frame = +2
Query: 620 PPPXXPPXXXXXXXTXKXXXXXXGGGXXPFXGGGXXPPPXXXXXGGXGGRPPPXXXXG 793
PPP PP T GG P GG PPP GG PPP G
Sbjct: 298 PPPGLPPI------TGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 349
Score = 32.3 bits (70), Expect = 0.62
Identities = 21/66 (31%), Positives = 21/66 (31%), Gaps = 9/66 (13%)
Frame = +2
Query: 623 PPXXPPXXXXXXXTXKXXXXXXGGGXXPFXGG---------GXXPPPXXXXXGGXGGRPP 775
PP PP T GG P GG G PPP GG G PP
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 368
Query: 776 PXXXXG 793
P G
Sbjct: 369 PPPPPG 374
Score = 31.9 bits (69), Expect = 0.81
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 3/32 (9%)
Frame = -2
Query: 774 GGRPPXPPXXXXX---GGGXXPPPXXGXXPPP 688
GG PP PP GG PPP G PPP
Sbjct: 323 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 354
Score = 31.5 bits (68), Expect = 1.1
Identities = 22/68 (32%), Positives = 22/68 (32%), Gaps = 6/68 (8%)
Frame = -2
Query: 876 PXGPXGGXXKXXGXXPXXXPKKKXVXXX----PXXXXGGGRPPXPPXXXXXG--GGXXPP 715
P P GG G P P P GG PP PP G GG PP
Sbjct: 311 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 370
Query: 714 PXXGXXPP 691
P G P
Sbjct: 371 PPPGMFAP 378
Score = 29.9 bits (64), Expect = 3.3
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Frame = -2
Query: 777 GGGRPPXPP-XXXXXGGGXXPPPXXGXXPP 691
GG PP PP GG PPP G PP
Sbjct: 307 GGPPPPPPPGGLPPITGGPPPPPPPGGLPP 336
Score = 29.5 bits (63), Expect = 4.3
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +1
Query: 994 PPPGGXXXFFFXPPPPPXXXXXXXXRPP 1077
PPPGG PPPPP PP
Sbjct: 329 PPPGGLPPISGGPPPPPPPPGGCPPPPP 356
Score = 29.1 bits (62), Expect = 5.7
Identities = 24/101 (23%), Positives = 25/101 (24%)
Frame = +1
Query: 601 KKKXKXPXPXXPPXXXXXXXNPKTXXKXXGGGXXPXXGGGXXXPPXXXXTRGXGXAPPPP 780
+K P PP P T G P GG PP G PPPP
Sbjct: 258 RKHINDPKIPLPPPTKMNLSAPST--SAGGSSALPPITGGPPPPPGLPPITGGPPPPPPP 315
Query: 781 XXXGXXXNXFFFXXXXGXXPXXFXXXPPXXXGXKXXXXPPP 903
G P PP PPP
Sbjct: 316 GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 356
Score = 28.7 bits (61), Expect = 7.6
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -2
Query: 774 GGRPPXPPXXXXXGGGXXPPPXXGXXP 694
GG PP P GG PPP G P
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPPGGLPP 320
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.1 bits (67), Expect = 1.4
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -2
Query: 777 GGGRPPXPPXXXXXGGGXXPPPXXGXXPPP 688
GG PP PP G G PPP P P
Sbjct: 345 GGMPPPPPPRYPSAGPGMYPPPPPSRPPAP 374
Score = 30.3 bits (65), Expect = 2.5
Identities = 21/69 (30%), Positives = 22/69 (31%)
Frame = +3
Query: 696 GSPXXXGGVXXPPXXKXNXGGXXGAPPPXXXGXXXXXFFFXEXPGGXPXXFFXXPPXXPG 875
G P G PP + G G PPP G PGG P PP P
Sbjct: 309 GPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPG--------MRYPGGMPP---PPPPRYPS 357
Query: 876 XXXXXXPPP 902
PPP
Sbjct: 358 AGPGMYPPP 366
Score = 29.1 bits (62), Expect = 5.7
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -2
Query: 774 GGRPPXPPXXXXXGGGXXPPP 712
GG PP PP GG PPP
Sbjct: 331 GGMPPPPPPGMRYPGGMPPPP 351
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.1 bits (67), Expect = 1.4
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -2
Query: 777 GGGRPPXPPXXXXXGGGXXPPPXXGXXPPP 688
GG PP PP G G PPP P P
Sbjct: 355 GGMPPPPPPRYPSAGPGMYPPPPPSRPPAP 384
Score = 30.3 bits (65), Expect = 2.5
Identities = 21/69 (30%), Positives = 22/69 (31%)
Frame = +3
Query: 696 GSPXXXGGVXXPPXXKXNXGGXXGAPPPXXXGXXXXXFFFXEXPGGXPXXFFXXPPXXPG 875
G P G PP + G G PPP G PGG P PP P
Sbjct: 319 GPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPG--------MRYPGGMPP---PPPPRYPS 367
Query: 876 XXXXXXPPP 902
PPP
Sbjct: 368 AGPGMYPPP 376
Score = 29.1 bits (62), Expect = 5.7
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -2
Query: 774 GGRPPXPPXXXXXGGGXXPPP 712
GG PP PP GG PPP
Sbjct: 341 GGMPPPPPPGMRYPGGMPPPP 361
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical protein
ZK863.2 protein.
Length = 330
Score = 30.7 bits (66), Expect = 1.9
Identities = 28/120 (23%), Positives = 32/120 (26%)
Frame = -2
Query: 1050 GXGGXGGXKKKXXXXAGXGGXVFXXXGXXPRGXSXPPXXXXKKEXKXXGGGGGXXVFXPX 871
G GG + AG G P G + P GG G P
Sbjct: 88 GGGGCQCAAQASGCPAGPPGPPGPDGSAGPAGPAGNPGADGDAGSPGEAGGAGPP--GPP 145
Query: 870 GPXGGXXKXXGXXPXXXPKKKXVXXXPXXXXGGGRPPXPPXXXXXGGGXXPPPXXGXXPP 691
GP G P + + P G P P GGG P P PP
Sbjct: 146 GPDGNPGAPGNDGEAGSPGTRSI-SSPGPAGPAGPPGPPGPDGAPGGGSGPGPAGPAGPP 204
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical protein
ZK863.2 protein.
Length = 330
Score = 30.7 bits (66), Expect = 1.9
Identities = 28/120 (23%), Positives = 32/120 (26%)
Frame = -2
Query: 1050 GXGGXGGXKKKXXXXAGXGGXVFXXXGXXPRGXSXPPXXXXKKEXKXXGGGGGXXVFXPX 871
G GG + AG G P G + P GG G P
Sbjct: 88 GGGGCQCAAQASGCPAGPPGPPGPDGSAGPAGPAGNPGADGDAGSPGEAGGAGPP--GPP 145
Query: 870 GPXGGXXKXXGXXPXXXPKKKXVXXXPXXXXGGGRPPXPPXXXXXGGGXXPPPXXGXXPP 691
GP G P + + P G P P GGG P P PP
Sbjct: 146 GPDGNPGAPGNDGEAGSPGTRSI-SSPGPAGPAGPPGPPGPDGAPGGGSGPGPAGPAGPP 204
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 30.7 bits (66), Expect = 1.9
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 994 PPPGGXXXFFFXPPPPP 1044
PPPGG F PPPPP
Sbjct: 664 PPPGGLGGFMPPPPPPP 680
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 30.7 bits (66), Expect = 1.9
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 994 PPPGGXXXFFFXPPPPP 1044
PPPGG F PPPPP
Sbjct: 664 PPPGGLGGFMPPPPPPP 680
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 29.9 bits (64), Expect = 3.3
Identities = 24/105 (22%), Positives = 27/105 (25%), Gaps = 3/105 (2%)
Frame = +1
Query: 730 PPXXXXTRGXGXAPPPPXXXGXXXNXFFFXXXX---GXXPXXFXXXPPXXXGXKXXXXPP 900
PP +G G P P G F P F PP PP
Sbjct: 322 PPQGAPQQGFGAPPQGPPQGGPPQGSFGAPPPQQFHAPSPQSFGGPPPPVSSAPGNFAPP 381
Query: 901 PXXXLXFFFXXXPRGGASPXGXXXXXXKNXXPPPGGXXXFFFXPP 1035
P F P +P G PP G + PP
Sbjct: 382 PQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPP 426
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 29.5 bits (63), Expect = 4.3
Identities = 15/52 (28%), Positives = 16/52 (30%)
Frame = +2
Query: 623 PPXXPPXXXXXXXTXKXXXXXXGGGXXPFXGGGXXPPPXXXXXGGXGGRPPP 778
PP PP + G P G PPP GG PPP
Sbjct: 503 PPPPPPLLGIAPMSTNAPPPPPMPGMAPLSTGAPTPPPPPPVGMANGGPPPP 554
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 29.1 bits (62), Expect = 5.7
Identities = 21/69 (30%), Positives = 23/69 (33%), Gaps = 2/69 (2%)
Frame = -2
Query: 903 GGGGXXVFXPXGPXGGXXKXXGXXPXXXPKKKXVXXXPXXXXGGG--RPPXPPXXXXXGG 730
GGGG P P G P+ + P GGG PP P GG
Sbjct: 22 GGGGGCGCAPPPPPPSPCGCGGGGGLALPQLPPLSL-PSLGGGGGCCPPPAPACGGGCGG 80
Query: 729 GXXPPPXXG 703
G P P G
Sbjct: 81 GVAPAPIGG 89
>Z82055-6|CAB04851.1| 365|Caenorhabditis elegans Hypothetical
protein T26H2.6 protein.
Length = 365
Score = 28.7 bits (61), Expect = 7.6
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -3
Query: 575 SIGKLLIPNNVXGPLITISINLGVKXLRIT*KIT 474
SIG L N+V G ++ + I GVK ++T K T
Sbjct: 206 SIGTALTLNSVFGAMVIVIIYCGVKTYKVTHKTT 239
>Z77667-7|CAB01238.2| 534|Caenorhabditis elegans Hypothetical
protein M04B2.5 protein.
Length = 534
Score = 28.7 bits (61), Expect = 7.6
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = -3
Query: 605 FFXXFFXXXFSIGKL----LIPNNVX-GPLITISINLGVKXLRIT*KITF 471
FF F+ S+ + ++PNNV PLITI G+ L++ ++T+
Sbjct: 361 FFHAFYFSFISMSTIGLGDVMPNNVTFSPLITIMFFFGMPILKVVNRVTY 410
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 28.7 bits (61), Expect = 7.6
Identities = 22/75 (29%), Positives = 23/75 (30%), Gaps = 1/75 (1%)
Frame = -2
Query: 1077 GXAXXXGXXGXGGXGGXKKKXXXXAGXGGXVFXXXGXXPRGXSXPPXXXXKKEXKXXG-G 901
G G G GG GG G GG F G G G G
Sbjct: 157 GGGGDFGGYGGGGMGGGGYGGGGDGGYGGGGFGGGGMGGYGGGMGGGGYGGGGMGGGGYG 216
Query: 900 GGGXXVFXPXGPXGG 856
GGG + P G GG
Sbjct: 217 GGGDGGYGPSGGYGG 231
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,547,321
Number of Sequences: 27780
Number of extensions: 425979
Number of successful extensions: 1956
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 717
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1446
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2898039926
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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