Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_O01
(870 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoi... 31 4.1
M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein. 31 4.1
M63730-1|AAA51839.1| 349|Homo sapiens BPAG2 protein. 31 4.1
AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alph... 31 4.1
AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alph... 31 4.1
BC071596-1|AAH71596.1| 1287|Homo sapiens RAB6 interacting protei... 30 9.5
BC009354-1|AAH09354.2| 948|Homo sapiens RAB6IP1 protein protein. 30 9.5
BC001593-1|AAH01593.3| 393|Homo sapiens TP53I13 protein protein. 30 9.5
AK075341-1|BAC11555.1| 393|Homo sapiens protein ( Homo sapiens ... 30 9.5
AK025499-1|BAB15155.1| 872|Homo sapiens protein ( Homo sapiens ... 30 9.5
AB209378-1|BAD92615.1| 317|Homo sapiens T-box 2 variant protein. 30 9.5
AB110214-1|BAD08208.1| 393|Homo sapiens damage stimulated cytop... 30 9.5
AB110209-1|BAD08203.1| 393|Homo sapiens damage stimulated cytop... 30 9.5
AB029014-1|BAA83043.1| 1359|Homo sapiens KIAA1091 protein protein. 30 9.5
>U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoid
antigen 2/type XVII collagen protein.
Length = 1497
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = +1
Query: 289 KPVTTERSSMMTAAN*PGRPTAPGVLGPAG 378
K VT+E SSM+T PG P PG +GP G
Sbjct: 807 KIVTSEGSSMLTV---PGPPGPPGAMGPPG 833
>M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein.
Length = 1532
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = +1
Query: 289 KPVTTERSSMMTAAN*PGRPTAPGVLGPAG 378
K VT+E SSM+T PG P PG +GP G
Sbjct: 842 KIVTSEGSSMLTV---PGPPGPPGAMGPPG 868
>M63730-1|AAA51839.1| 349|Homo sapiens BPAG2 protein.
Length = 349
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = +1
Query: 289 KPVTTERSSMMTAAN*PGRPTAPGVLGPAG 378
K VT+E SSM+T PG P PG +GP G
Sbjct: 300 KIVTSEGSSMLTV---PGPPGPPGAMGPPG 326
>AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1497
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = +1
Query: 289 KPVTTERSSMMTAAN*PGRPTAPGVLGPAG 378
K VT+E SSM+T PG P PG +GP G
Sbjct: 807 KIVTSEGSSMLTV---PGPPGPPGAMGPPG 833
>AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1415
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = +1
Query: 289 KPVTTERSSMMTAAN*PGRPTAPGVLGPAG 378
K VT+E SSM+T PG P PG +GP G
Sbjct: 807 KIVTSEGSSMLTV---PGPPGPPGAMGPPG 833
>BC071596-1|AAH71596.1| 1287|Homo sapiens RAB6 interacting protein 1
protein.
Length = 1287
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 151 IGRTKKDIQLAVSFQSDTRVTSPGTNKWGEGRSSARWAK 267
IG+ K + QSD T P +NKW + + A+W +
Sbjct: 660 IGQGKYEPGFFPKLQSDVLSTGPASNKWTKRNAPAQWRR 698
>BC009354-1|AAH09354.2| 948|Homo sapiens RAB6IP1 protein protein.
Length = 948
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 151 IGRTKKDIQLAVSFQSDTRVTSPGTNKWGEGRSSARWAK 267
IG+ K + QSD T P +NKW + + A+W +
Sbjct: 321 IGQGKYEPGFFPKLQSDVLSTGPASNKWTKRNAPAQWRR 359
>BC001593-1|AAH01593.3| 393|Homo sapiens TP53I13 protein protein.
Length = 393
Score = 30.3 bits (65), Expect = 9.5
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = -2
Query: 542 RPYRRLRGGCSCQDPSTPEPVAVIPDLPPICLFISIAASAFLLA-QSRRPP*FVLSPAGP 366
R R+ + C+ S P P P +C + A A A +S RPP ++ GP
Sbjct: 135 RKQRKKKAWIYCESLSGPAPSEPTPGRGRLCRRGCVQALALAFALRSWRPPGTEVTSQGP 194
Query: 365 RTPGAVG 345
R P + G
Sbjct: 195 RQPSSSG 201
>AK075341-1|BAC11555.1| 393|Homo sapiens protein ( Homo sapiens
cDNA PSEC0020 fis, clone NT2RP1000255. ).
Length = 393
Score = 30.3 bits (65), Expect = 9.5
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = -2
Query: 542 RPYRRLRGGCSCQDPSTPEPVAVIPDLPPICLFISIAASAFLLA-QSRRPP*FVLSPAGP 366
R R+ + C+ S P P P +C + A A A +S RPP ++ GP
Sbjct: 135 RKQRKKKAWIYCESLSGPAPSEPTPGRGRLCRRGCVQALALAFALRSWRPPGTEVTSQGP 194
Query: 365 RTPGAVG 345
R P + G
Sbjct: 195 RQPSSSG 201
>AK025499-1|BAB15155.1| 872|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21846 fis, clone HEP01887. ).
Length = 872
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 151 IGRTKKDIQLAVSFQSDTRVTSPGTNKWGEGRSSARWAK 267
IG+ K + QSD T P +NKW + + A+W +
Sbjct: 245 IGQGKYEPGFFPKLQSDVLSTGPASNKWTKRNAPAQWRR 283
>AB209378-1|BAD92615.1| 317|Homo sapiens T-box 2 variant protein.
Length = 317
Score = 30.3 bits (65), Expect = 9.5
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1
Query: 211 TSPGTNKWGEGRSSARWAKMMM 276
T GT +WG GRSS RWA +++
Sbjct: 292 TGGGTGRWG-GRSSGRWAGLLL 312
>AB110214-1|BAD08208.1| 393|Homo sapiens damage stimulated
cytoplasmic protein1 protein.
Length = 393
Score = 30.3 bits (65), Expect = 9.5
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = -2
Query: 542 RPYRRLRGGCSCQDPSTPEPVAVIPDLPPICLFISIAASAFLLA-QSRRPP*FVLSPAGP 366
R R+ + C+ S P P P +C + A A A +S RPP ++ GP
Sbjct: 135 RKQRKKKAWIYCESLSGPAPSEPTPGRGRLCRRGCVQALALAFALRSWRPPGTEVTSQGP 194
Query: 365 RTPGAVG 345
R P + G
Sbjct: 195 RQPSSSG 201
>AB110209-1|BAD08203.1| 393|Homo sapiens damage stimulated
cytoplasmic protein1 protein.
Length = 393
Score = 30.3 bits (65), Expect = 9.5
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = -2
Query: 542 RPYRRLRGGCSCQDPSTPEPVAVIPDLPPICLFISIAASAFLLA-QSRRPP*FVLSPAGP 366
R R+ + C+ S P P P +C + A A A +S RPP ++ GP
Sbjct: 135 RKQRKKKAWIYCESLSGPAPSEPTPGRGRLCRRGCVQALALAFALRSWRPPGTEVTSQGP 194
Query: 365 RTPGAVG 345
R P + G
Sbjct: 195 RQPSSSG 201
>AB029014-1|BAA83043.1| 1359|Homo sapiens KIAA1091 protein protein.
Length = 1359
Score = 30.3 bits (65), Expect = 9.5
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 151 IGRTKKDIQLAVSFQSDTRVTSPGTNKWGEGRSSARWAK 267
IG+ K + QSD T P +NKW + + A+W +
Sbjct: 732 IGQGKYEPGFFPKLQSDVLSTGPASNKWTKRNAPAQWRR 770
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,347,341
Number of Sequences: 237096
Number of extensions: 2626960
Number of successful extensions: 13492
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 9974
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13383
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11048563978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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