Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_N24
(937 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 38 0.003
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 36 0.008
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 35 0.014
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 33 0.058
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 33 0.058
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 33 0.076
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.23
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 0.71
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 29 0.94
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 29 0.94
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 27 3.8
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 27 3.8
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 27 3.8
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 26 8.8
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 37.5 bits (83), Expect = 0.003
Identities = 29/78 (37%), Positives = 33/78 (42%), Gaps = 8/78 (10%)
Frame = -3
Query: 893 GWGXVXGGXGRGEXGGGXCFXFXCWGGXGXX-----GXXGGPRPRXGXXGAWXGG-GG*X 732
G+G GG G G G F +GG G G GGP G G + GG GG
Sbjct: 189 GFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFG 248
Query: 731 XXVXG--GGXXGGGGGXG 684
+ G GG G GGG G
Sbjct: 249 GGLGGFGGGPGGFGGGPG 266
Score = 35.9 bits (79), Expect = 0.008
Identities = 24/58 (41%), Positives = 26/58 (44%)
Frame = -3
Query: 863 RGEXGGGXCFXFXCWGGXGXXGXXGGPRPRXGXXGAWXGGGG*XXXVXGGGXXGGGGG 690
RG GGG +GG G G GGP P G G + G GG G G GGG G
Sbjct: 183 RGHNGGG-------FGGFG--GGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPG 231
Score = 25.8 bits (54), Expect = 8.8
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -1
Query: 553 GGGGXXLGGGAXPPPPXXG 497
GGG GGG+ PPP G
Sbjct: 187 GGGFGGFGGGSGGPPPGPG 205
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 35.9 bits (79), Expect = 0.008
Identities = 20/46 (43%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = +1
Query: 685 PXPPPPPXX-PPPXTXXXXPPPPXHAPXXPXRGRGPPXXPXXPXPP 819
P P P P PPP PPPP P G GPP P P PP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPP--PPPPGVAGAGPP--PPPPPPP 783
Score = 32.7 bits (71), Expect = 0.076
Identities = 16/44 (36%), Positives = 17/44 (38%)
Frame = +1
Query: 691 PPPPPXXPPPXTXXXXPPPPXHAPXXPXRGRGPPXXPXXPXPPQ 822
PPPPP PPP PPPP P G P P+
Sbjct: 761 PPPPP--PPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEPE 802
Score = 31.5 bits (68), Expect = 0.18
Identities = 19/54 (35%), Positives = 19/54 (35%)
Frame = +1
Query: 691 PPPPPXXPPPXTXXXXPPPPXHAPXXPXRGRGPPXXPXXPXPPQXXKXKHXPPP 852
PPPPP P P P P P G GPP P P PPP
Sbjct: 732 PPPPP--PAVIVPTPAPAPIPVPPPAPIMG-GPPPPPPPPGVAGAGPPPPPPPP 782
Score = 30.7 bits (66), Expect = 0.31
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = +2
Query: 743 PXPXTPPXHXXGGGGPPXXXXXPPPPNXKKXNTXPXPSPPGP 868
P P PP GG PP PPPP P P PP P
Sbjct: 748 PIPVPPPAPIMGGPPPP-----PPPPGVA--GAGPPPPPPPP 782
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +2
Query: 545 PPPPXQXXPFXLXPPXXPXPPP 610
PPPP PP P PPP
Sbjct: 762 PPPPPPPGVAGAGPPPPPPPPP 783
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 35.1 bits (77), Expect = 0.014
Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Frame = +1
Query: 685 PXPPPPPX-XPPPXTXXXXPPPPXHAPXXPXRGRGPPXXP 801
P PPPPP PPP + P P AP P P P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 33.5 bits (73), Expect = 0.044
Identities = 17/50 (34%), Positives = 18/50 (36%), Gaps = 4/50 (8%)
Frame = +1
Query: 682 HPXPPPP----PXXPPPXTXXXXPPPPXHAPXXPXRGRGPPXXPXXPXPP 819
HP PP PP + PPPP P P P P P PP
Sbjct: 1685 HPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 32.3 bits (70), Expect = 0.10
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = +1
Query: 676 RXHPXPPPPPXXPPPXTXXXXPPPPXHAPXXPXRGRGPPXXPXXPXP 816
R PP P P PPP AP P GPP P P P
Sbjct: 1693 RPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMP---AGPPSAPPPPLP 1736
Score = 28.7 bits (61), Expect = 1.2
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +2
Query: 524 PXPQXXXPPPPXQXXPFXLXPPXXPXPP 607
P P PPP P PP P PP
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/52 (28%), Positives = 15/52 (28%)
Frame = +1
Query: 694 PPPPXXPPPXTXXXXPPPPXHAPXXPXRGRGPPXXPXXPXPPQXXKXKHXPP 849
P P PP PP AP P P P P P PP
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 3/33 (9%)
Frame = +1
Query: 691 PPPPPXXPPPXTXXXXPPPPX---HAPXXPXRG 780
PPPP P P PPPP AP P G
Sbjct: 1715 PPPPSAPPMPAGPPSAPPPPLPASSAPSVPNPG 1747
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = +2
Query: 788 PPXXXXXPPPPNXKKXNTXPXPSPPGP 868
PP PPPP+ P +PP P
Sbjct: 1708 PPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 25.8 bits (54), Expect = 8.8
Identities = 15/57 (26%), Positives = 15/57 (26%), Gaps = 1/57 (1%)
Frame = +1
Query: 685 PXPPPP-PXXPPPXTXXXXPPPPXHAPXXPXRGRGPPXXPXXPXPPQXXKXKHXPPP 852
P PP P PP P P P P PP H P P
Sbjct: 1476 PAPPAPVSQLPPAVPNVPVPSMIPSVAQQPPSSVAPATAPSSTLPPSQSSFAHVPSP 1532
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 33.1 bits (72), Expect = 0.058
Identities = 22/60 (36%), Positives = 22/60 (36%), Gaps = 4/60 (6%)
Frame = +1
Query: 685 PXPPP--PPXXPP--PXTXXXXPPPPXHAPXXPXRGRGPPXXPXXPXPPQXXKXKHXPPP 852
P PP PP PP P PP P AP P G P P P PP P P
Sbjct: 425 PSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAP--PLPPAAPAPPPAPAP 482
Score = 29.9 bits (64), Expect = 0.54
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 8/44 (18%)
Frame = +1
Query: 685 PXPPPPP--------XXPPPXTXXXXPPPPXHAPXXPXRGRGPP 792
P PPPPP PP PPPP A P GR PP
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSA---PSTGRQPP 377
Score = 28.7 bits (61), Expect = 1.2
Identities = 19/57 (33%), Positives = 19/57 (33%), Gaps = 1/57 (1%)
Frame = +1
Query: 685 PXPPP-PPXXPPPXTXXXXPPPPXHAPXXPXRGRGPPXXPXXPXPPQXXKXKHXPPP 852
P PP PP PP P P AP P PP P P P PP
Sbjct: 418 PTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPL---PPSAPIAPPLPAGMPAAPPLPP 471
Score = 28.3 bits (60), Expect = 1.6
Identities = 16/56 (28%), Positives = 16/56 (28%)
Frame = +1
Query: 685 PXPPPPPXXPPPXTXXXXPPPPXHAPXXPXRGRGPPXXPXXPXPPQXXKXKHXPPP 852
P P PP PP P P P PP P P P PP
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAP--AAPPLPPSAPIAPPLPAGMPAAPP 468
Score = 28.3 bits (60), Expect = 1.6
Identities = 19/63 (30%), Positives = 19/63 (30%), Gaps = 7/63 (11%)
Frame = +1
Query: 685 PXPPPP--PXXPPPXTXXXXPP-----PPXHAPXXPXRGRGPPXXPXXPXPPQXXKXKHX 843
P P PP P PP PP P P P PP P P
Sbjct: 416 PVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPA 475
Query: 844 PPP 852
PPP
Sbjct: 476 PPP 478
Score = 27.1 bits (57), Expect = 3.8
Identities = 16/53 (30%), Positives = 17/53 (32%)
Frame = +1
Query: 691 PPPPPXXPPPXTXXXXPPPPXHAPXXPXRGRGPPXXPXXPXPPQXXKXKHXPP 849
PPPPP PP AP P R P P P + PP
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPP-PRSAPSTGRQPPPLSSSRAVSNPP 389
Score = 26.6 bits (56), Expect = 5.0
Identities = 22/69 (31%), Positives = 24/69 (34%), Gaps = 8/69 (11%)
Frame = +1
Query: 676 RXHPXPPPPP----XXPPP----XTXXXXPPPPXHAPXXPXRGRGPPXXPXXPXPPQXXK 831
+ P PPPPP PP + PPPP P R P PPQ
Sbjct: 308 KKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPP-----PPPRSNA---AGSIPLPPQGRS 359
Query: 832 XKHXPPPXS 858
PPP S
Sbjct: 360 APPPPPPRS 368
Score = 26.2 bits (55), Expect = 6.6
Identities = 15/47 (31%), Positives = 15/47 (31%), Gaps = 2/47 (4%)
Frame = +1
Query: 685 PXPPPPPXXPPPXTXXXX--PPPPXHAPXXPXRGRGPPXXPXXPXPP 819
P PP P PP P PP P PP P P P
Sbjct: 231 PIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAP 277
Score = 26.2 bits (55), Expect = 6.6
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = +2
Query: 749 PXTPPXHXXGGGGPPXXXXXPPPPNXKKXNTXPXPSPP 862
P PP G P PP N + +T P P+PP
Sbjct: 388 PPAPPPAIPGRSAPAL----PPLGNASRTSTPPVPTPP 421
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 33.1 bits (72), Expect = 0.058
Identities = 20/59 (33%), Positives = 20/59 (33%), Gaps = 4/59 (6%)
Frame = +1
Query: 685 PXPPPPPXXPP---PXTXXXXPPPPXHAPXXPXRGRG-PPXXPXXPXPPQXXKXKHXPP 849
P P P PP P PPP AP P G PP P PP PP
Sbjct: 1170 PVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPP 1228
Score = 31.9 bits (69), Expect = 0.13
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Frame = +1
Query: 685 PXPPPP--PXXPPPXTXXXXPPPPXHAPXXPXRGRGPPXXP 801
P PPP P P P PPP AP P G P P
Sbjct: 1190 PVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVP 1230
Score = 29.1 bits (62), Expect = 0.94
Identities = 16/56 (28%), Positives = 16/56 (28%)
Frame = +1
Query: 685 PXPPPPPXXPPPXTXXXXPPPPXHAPXXPXRGRGPPXXPXXPXPPQXXKXKHXPPP 852
P P P P P P P AP P P P P K PP
Sbjct: 1115 PAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPP 1170
Score = 28.7 bits (61), Expect = 1.2
Identities = 17/54 (31%), Positives = 18/54 (33%), Gaps = 1/54 (1%)
Frame = +1
Query: 691 PPPPPXXPPPXTXXXXPPPPXHAPXXPXRGRGPP-XXPXXPXPPQXXKXKHXPP 849
P PP P P + P P AP P PP P PP PP
Sbjct: 1060 PSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPP 1113
Score = 28.7 bits (61), Expect = 1.2
Identities = 16/56 (28%), Positives = 16/56 (28%)
Frame = +1
Query: 685 PXPPPPPXXPPPXTXXXXPPPPXHAPXXPXRGRGPPXXPXXPXPPQXXKXKHXPPP 852
P P P P P P P AP P P P P K PP
Sbjct: 1077 PAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPP 1132
Score = 27.9 bits (59), Expect = 2.2
Identities = 18/59 (30%), Positives = 18/59 (30%), Gaps = 4/59 (6%)
Frame = +1
Query: 685 PXPPP---PPXXPPPXTXXXXPPPPXHAPXXPXRGRG-PPXXPXXPXPPQXXKXKHXPP 849
P P P PP P P P P P G PP P PP PP
Sbjct: 1151 PVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPP 1209
Score = 27.5 bits (58), Expect = 2.9
Identities = 19/60 (31%), Positives = 19/60 (31%), Gaps = 5/60 (8%)
Frame = +1
Query: 685 PXPPP----PPXXPPPXTXXXXPPPPXHAPXXPXRGRGPP-XXPXXPXPPQXXKXKHXPP 849
P P P PP PPP P P P P PP P PP PP
Sbjct: 1180 PVPKPAAGVPP-VPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPP 1238
Score = 27.1 bits (57), Expect = 3.8
Identities = 17/59 (28%), Positives = 17/59 (28%), Gaps = 3/59 (5%)
Frame = +1
Query: 685 PXPPPP---PXXPPPXTXXXXPPPPXHAPXXPXRGRGPPXXPXXPXPPQXXKXKHXPPP 852
P P P P P P P P AP P P P P K PP
Sbjct: 1093 PVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPP 1151
Score = 27.1 bits (57), Expect = 3.8
Identities = 18/59 (30%), Positives = 18/59 (30%), Gaps = 4/59 (6%)
Frame = +1
Query: 685 PXPPPPPXXPPPXTXXXXPP---PPXHAPXXPXRGRGPP-XXPXXPXPPQXXKXKHXPP 849
P P P PP PP P AP P PP P PP PP
Sbjct: 1122 PVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPP 1180
Score = 26.6 bits (56), Expect = 5.0
Identities = 19/63 (30%), Positives = 20/63 (31%), Gaps = 5/63 (7%)
Frame = +1
Query: 685 PXPPPP---PXXPPPXTXXXXPPPPXHAPXXP-XRGRGPP-XXPXXPXPPQXXKXKHXPP 849
P P P P PPP T P P P P + PP P P P
Sbjct: 1199 PVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTPRSSVPS 1258
Query: 850 PXS 858
P S
Sbjct: 1259 PHS 1261
Score = 25.8 bits (54), Expect = 8.8
Identities = 18/63 (28%), Positives = 19/63 (30%), Gaps = 8/63 (12%)
Frame = +1
Query: 685 PXPPPPPXXPPP------XTXXXXPPPPXHAPXXPXRG--RGPPXXPXXPXPPQXXKXKH 840
P P PP PPP + PP H P P P P PP
Sbjct: 961 PRPAAPPSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSK 1020
Query: 841 XPP 849
PP
Sbjct: 1021 APP 1023
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 32.7 bits (71), Expect = 0.076
Identities = 19/58 (32%), Positives = 21/58 (36%), Gaps = 3/58 (5%)
Frame = +1
Query: 685 PXPPPPPXX-PPPXTXXXXP--PPPXHAPXXPXRGRGPPXXPXXPXPPQXXKXKHXPP 849
P PP P PP + P PPP A P + PP P P Q PP
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPP 185
Score = 31.1 bits (67), Expect = 0.23
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +1
Query: 691 PPPPPXXPPPXTXXXXPPPPXHAPXXPXRGRGPPXXPXXPXPP 819
PP P PPP P AP P PP P P PP
Sbjct: 165 PPIPSSLPPPAQPAAPVKSPPSAPSLP--SAVPPMPPKVPPPP 205
Score = 30.3 bits (65), Expect = 0.41
Identities = 20/63 (31%), Positives = 21/63 (33%), Gaps = 5/63 (7%)
Frame = +1
Query: 685 PXPPPPPXXPPPXTXXXXPP-----PPXHAPXXPXRGRGPPXXPXXPXPPQXXKXKHXPP 849
P PPP P PP PP P P + PP P P K PP
Sbjct: 147 PSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPV--KSPPSAPSLPSAVPPMPPKVPPP 204
Query: 850 PXS 858
P S
Sbjct: 205 PLS 207
Score = 28.7 bits (61), Expect = 1.2
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 685 PXPPPPPXXPPPXTXXXXPP 744
P PPPPP P P PP
Sbjct: 3 PAPPPPPPAPAPAAAAPAPP 22
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 31.1 bits (67), Expect = 0.23
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 682 HPXPPPPPXXPPPXTXXXXPPPPXH 756
+P PPPPP P + PPPP +
Sbjct: 8 NPPPPPPPPGFEPPSQPPPPPPPGY 32
Score = 29.9 bits (64), Expect = 0.54
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 685 PXPPPPPXXPPPXTXXXXPPPP 750
P PPPP PP PPPP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPP 27
Score = 28.3 bits (60), Expect = 1.6
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +1
Query: 742 PPPXHAPXXPXRGRGPPXXPXXPXPPQXXKXKHXPPP 852
PP P P G PP P P PP K + P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPPGYVKKRKNKTP 41
Score = 28.3 bits (60), Expect = 1.6
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +2
Query: 782 GGPPXXXXXPPPPNXKKXNTXPXPSPPG 865
G PP PPPP + + P P PPG
Sbjct: 7 GNPPPP---PPPPGFEPPSQPPPPPPPG 31
Score = 27.9 bits (59), Expect = 2.2
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +1
Query: 691 PPPPPXXPPPXTXXXXPPPPXHAP 762
PPPPP PPP PPP P
Sbjct: 9 PPPPP--PPPGFEPPSQPPPPPPP 30
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 530 PQXXXPPPPXQXXPFXLXPPXXPXPPP 610
P PPPP P PP P PPP
Sbjct: 5 PPGNPPPPPP---PPGFEPPSQPPPPP 28
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 29.5 bits (63), Expect = 0.71
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = +1
Query: 685 PXPPPPPXXPPPXTXXXXPPPPXHAPXXPXRGRGPPXXPXXPXPP 819
P PPPPP PP T P P P P P P
Sbjct: 238 PPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQP 282
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 29.1 bits (62), Expect = 0.94
Identities = 14/49 (28%), Positives = 16/49 (32%)
Frame = +1
Query: 676 RXHPXPPPPPXXPPPXTXXXXPPPPXHAPXXPXRGRGPPXXPXXPXPPQ 822
+ P PPPP PP PP P + P P PQ
Sbjct: 203 KAQPPPPPPQQNYPPAASSSAPPMQYQQTAYPPQQAPYPPVQAYPQAPQ 251
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 29.1 bits (62), Expect = 0.94
Identities = 14/53 (26%), Positives = 15/53 (28%)
Frame = +1
Query: 691 PPPPPXXPPPXTXXXXPPPPXHAPXXPXRGRGPPXXPXXPXPPQXXKXKHXPP 849
P PP P P PPPP + P P P PP
Sbjct: 729 PAPPTPAPTPAVKHHPPPPPVRSSISPSMPPAPLTHANSSTPMNYVSQPESPP 781
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 27.1 bits (57), Expect = 3.8
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +1
Query: 685 PXPPPPPXXPPPXTXXXXPPPPXHAPXXPXRGRGPPXXPXXPXP 816
P PP P P P PP P G P P P P
Sbjct: 104 PREPPLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPPLPNEPVP 147
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 27.1 bits (57), Expect = 3.8
Identities = 24/64 (37%), Positives = 24/64 (37%)
Frame = -3
Query: 875 GGXGRGEXGGGXCFXFXCWGGXGXXGXXGGPRPRXGXXGAWXGGGG*XXXVXGGGXXGGG 696
GG G G GG F GG G G G G GA G GG GG G G
Sbjct: 9 GGRG-GSRGGRGGFN----GGRGGFGGGRGGARGGGRGGARGGRGG-----RGGARGGRG 58
Query: 695 GGXG 684
G G
Sbjct: 59 GSSG 62
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 27.1 bits (57), Expect = 3.8
Identities = 16/49 (32%), Positives = 17/49 (34%), Gaps = 3/49 (6%)
Frame = +1
Query: 682 HPXPPPPPXXPPPXTXXXXPPPP---XHAPXXPXRGRGPPXXPXXPXPP 819
HP PPPPP P + P A G P P P PP
Sbjct: 904 HPTPPPPPPLPVKTSLNTFSHPDSVNIVANDTSVAGVMPAFPPPPPPPP 952
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 25.8 bits (54), Expect = 8.8
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = -3
Query: 800 GXXGGPRPRXGXXGAWXGGGG*XXXVXGGGXXGGGGG 690
G GP R G G + GG G GG GG GG
Sbjct: 129 GARNGPAGR-GGRGGFRGGRGGSRGGFGGNSRGGFGG 164
Score = 25.8 bits (54), Expect = 8.8
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = -3
Query: 818 GGXGXXGXXGGPRPRXGXXGAWXGGGG*XXXVXGGGXXGGGGG 690
G G G GG R G GGG GG G GG
Sbjct: 139 GRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGG 181
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.314 0.149 0.525
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,614,602
Number of Sequences: 5004
Number of extensions: 22347
Number of successful extensions: 289
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 178
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 475330268
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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