Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_N19
(863 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0703 + 6212409-6212456,6212661-6212742,6214031-6214106,621... 68 1e-11
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 31 0.90
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 31 0.90
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 31 0.90
02_05_0686 - 30900748-30902167,30903442-30904742 30 2.1
05_01_0131 + 888247-888771,889092-889154 30 2.7
11_02_0149 - 8801675-8804332 29 4.8
11_06_0610 - 25449085-25453284 29 6.3
07_03_1643 + 28329090-28329125,28329260-28329335,28329413-28330305 29 6.3
05_05_0228 + 23454434-23455456,23456151-23456555,23456657-23457004 29 6.3
12_02_0299 - 17051570-17052474,17053542-17053755 28 8.4
02_04_0654 - 24755339-24755408,24755488-24755624,24756243-247563... 28 8.4
>08_01_0703 +
6212409-6212456,6212661-6212742,6214031-6214106,
6214498-6214594,6214760-6214862,6214973-6215103,
6215285-6215462,6215528-6215715,6215945-6216154,
6216231-6216578,6216660-6216786,6217304-6217455
Length = 579
Score = 67.7 bits (158), Expect = 1e-11
Identities = 35/73 (47%), Positives = 44/73 (60%)
Frame = +2
Query: 98 KLALLSVSDKTGLLSLAKSLSECGLQLIASGGTXTALRNAGLTVQDVSDIXRAPEMLGXP 277
K AL+S+SDKT L L L G +I++GGT ++L AG+ V V I PEML
Sbjct: 46 KQALISLSDKTDLAYLGNGLQALGFSIISTGGTASSLEAAGVNVTKVEQITNFPEMLDGR 105
Query: 278 VKTLHPAVPAGXL 316
VKTLHP+V G L
Sbjct: 106 VKTLHPSVHGGIL 118
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 31.5 bits (68), Expect = 0.90
Identities = 18/76 (23%), Positives = 20/76 (26%)
Frame = +3
Query: 588 PXXXPXXPPXPXXXFGXXXXKNXPPXGGXXLXFSXKKPPPXFXAXXPPXKKXSPRXXPPX 767
P P PP P + PP PPP P + P PP
Sbjct: 566 PPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPPPPPPPILPNRSVPPPPPPPP 625
Query: 768 XXXXXGXXPPXXXXPP 815
PP PP
Sbjct: 626 PLPNHSVLPPPPPPPP 641
Score = 31.1 bits (67), Expect = 1.2
Identities = 25/104 (24%), Positives = 28/104 (26%), Gaps = 1/104 (0%)
Frame = +2
Query: 497 PPXXPXXQKTPNPGFPXXLVXXPXXXXXFXPXXXPXXXPXPXPXXWGXXGKKLXPQXGXX 676
PP P +T PG P P P P K+ P
Sbjct: 694 PPPLPPANRTNGPGVPSAPPPPPPPPPANRSNGPSAPAPPLPPPLPAAANKRNPPAPPPP 753
Query: 677 PXFFGKKTP-PXIXSKXSPXXKXFPPGXPPXXXXXXGXXPPXXK 805
P GKK P P +P P PP PP K
Sbjct: 754 PLMTGKKAPAPPPPPPQAPKPPGTVPPPPPLHGASGRPHPPSSK 797
Score = 28.7 bits (61), Expect = 6.3
Identities = 19/72 (26%), Positives = 21/72 (29%)
Frame = +1
Query: 598 PXXXPPPPPXXLGXXGXKIXPPXGXSPXXFRXKNPPPXXXQXFPXXKXFPPGXXPXXXXX 777
P PPPPP G PP P PPP + + PP P
Sbjct: 544 PPPPPPPPPPPSGNKPAFSPPPPPPPPP------PPPLPQSNYASSQPPPPPPPPPLPNC 597
Query: 778 XXXXXPPXXXXP 813
PP P
Sbjct: 598 LVPSPPPPPPPP 609
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 31.5 bits (68), Expect = 0.90
Identities = 22/93 (23%), Positives = 27/93 (29%), Gaps = 2/93 (2%)
Frame = +3
Query: 543 PXXWXPXPXXXXXFXPXXXPXXPPXPXXXFGXXXXKNXPPXGGXXLXFSXKKPPPXF--X 716
P P P P P P P FG + P + + PPP +
Sbjct: 43 PPQGAPPPFLAPPPPPPPGPPPPHQPQFNFGPGPPQQQQPPPPPQMYYQPPPPPPPYGVN 102
Query: 717 AXXPPXKKXSPRXXPPXXXXXXGXXPPXXXXPP 815
+ PP P PP PP PP
Sbjct: 103 SSQPPPPPPPPPSPPPSAPPP--PPPPPTQPPP 133
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = +1
Query: 610 PPPPPXXLGXXGXKIXPPXGXSPXXFRXKNPPPXXXQXFPXXKXFPP 750
PPPPP + PP SP PPP Q P P
Sbjct: 94 PPPPPYGVNSSQPPPPPPPPPSPPPSAPPPPPPPPTQPPPREAQLAP 140
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/41 (31%), Positives = 14/41 (34%)
Frame = +3
Query: 699 PPPXFXAXXPPXKKXSPRXXPPXXXXXXGXXPPXXXXPPVF 821
PPP P +P PP G PP PP F
Sbjct: 11 PPPPQGGFPPQPPPMNPYGPPPPQQPAYGHMPPPQGAPPPF 51
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 31.5 bits (68), Expect = 0.90
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = +1
Query: 559 PAPXTXXXFXXKXPXXXPPPPPXXLGXXGXKIXPPXGXSPXXFRXKNPPP 708
P P P PPPPP G G PP P R + PPP
Sbjct: 353 PPPAAPAAPRPPGPGPGPPPPPGAAGRGGG--GPPPPALPGGPRARGPPP 400
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/51 (31%), Positives = 17/51 (33%)
Frame = +1
Query: 610 PPPPPXXLGXXGXKIXPPXGXSPXXFRXKNPPPXXXQXFPXXKXFPPGXXP 762
PPPPP PP +P K PPP P P G P
Sbjct: 314 PPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSP 364
Score = 28.3 bits (60), Expect = 8.4
Identities = 21/70 (30%), Positives = 21/70 (30%), Gaps = 4/70 (5%)
Frame = +3
Query: 600 PXXPPXPXXXFGXXXXKNXPPXGGXXLXFSXKKPPPXFXA----XXPPXKKXSPRXXPPX 767
P PP P PP K PPP A PP K SP PP
Sbjct: 311 PAPPPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPP 370
Query: 768 XXXXXGXXPP 797
G PP
Sbjct: 371 GGKKGGPPPP 380
>05_01_0131 + 888247-888771,889092-889154
Length = 195
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/51 (31%), Positives = 18/51 (35%)
Frame = +1
Query: 610 PPPPPXXLGXXGXKIXPPXGXSPXXFRXKNPPPXXXQXFPXXKXFPPGXXP 762
PPPPP P G P +PPP FP + P G P
Sbjct: 81 PPPPPSTPTQFSVLRKVPTGPDPIT---SDPPPPPLSEFPVLREVPSGPDP 128
>11_02_0149 - 8801675-8804332
Length = 885
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +2
Query: 71 SKQNMASNGKLALLSVSDKTGLLSLAKSLSECGLQL 178
S QN+ S G +ALL+ ++ T + S + S +E G QL
Sbjct: 553 SCQNVTSMGVMALLATAEPTSMPSSSTSSNETGSQL 588
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 28.7 bits (61), Expect = 6.3
Identities = 20/65 (30%), Positives = 22/65 (33%), Gaps = 2/65 (3%)
Frame = +1
Query: 610 PPPPPXXLGXXGXKIXPPXGXSPXXFRXK-NPPPXXXQXFP-XXKXFPPGXXPXXXXXXX 783
PPP P K PP G SP K +PPP + P K PP
Sbjct: 565 PPPVPEGHTPSPPKSGPPAGESPPTPESKASPPPTPEEYTPSPPKSTPPAEKSPPTPESK 624
Query: 784 XXXPP 798
PP
Sbjct: 625 ASSPP 629
>07_03_1643 + 28329090-28329125,28329260-28329335,28329413-28330305
Length = 334
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/50 (30%), Positives = 18/50 (36%), Gaps = 2/50 (4%)
Frame = +1
Query: 559 PAPXTXXXFXXKXPXXXPPPPPX--XLGXXGXKIXPPXGXSPXXFRXKNP 702
P P + P PPPPP G G + PP F +NP
Sbjct: 279 PPPQMSYGYSPYPPMMMPPPPPPEYLYGPPGMRSSPPQESYSNMFNEENP 328
>05_05_0228 + 23454434-23455456,23456151-23456555,23456657-23457004
Length = 591
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -3
Query: 204 AVXVPPLAINCRPHSDRLFANESSPVLSETLRRASF 97
AV PP+A CRPH RL ++ V + L R+ +
Sbjct: 20 AVLHPPVASACRPHPPRLIRCGAAAVPDDELLRSLY 55
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 28.3 bits (60), Expect = 8.4
Identities = 17/67 (25%), Positives = 20/67 (29%)
Frame = +1
Query: 598 PXXXPPPPPXXLGXXGXKIXPPXGXSPXXFRXKNPPPXXXQXFPXXKXFPPGXXPXXXXX 777
P PPPPP ++ P P +PPP P FP P
Sbjct: 286 PPSPPPPPPPAFPFPFPQLPPLPHFPPLPSFYPSPPPPPPPPPPPPPSFPWPFPPLAPLF 345
Query: 778 XXXXXPP 798
PP
Sbjct: 346 PPYPSPP 352
>02_04_0654 -
24755339-24755408,24755488-24755624,24756243-24756326,
24756929-24756944,24758035-24758405
Length = 225
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +1
Query: 610 PPPPPXXLGXXGXKIXPPXGXSPXXFRXKNPPP 708
PPPPP + PP P F PPP
Sbjct: 34 PPPPPPLFPAMSARPQPPRPAHPARFVKPMPPP 66
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,156,813
Number of Sequences: 37544
Number of extensions: 444114
Number of successful extensions: 1237
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1133
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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