Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_N16
         (919 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0918 - 21560635-21560795,21560847-21560935,21561696-215617...    29   3.9  
01_01_0700 - 5413026-5413122,5413226-5413356,5413840-5413905,541...    29   3.9  
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585...    28   9.0  

>10_08_0918 -
           21560635-21560795,21560847-21560935,21561696-21561760,
           21561841-21561892,21562271-21562356,21562457-21562626,
           21562748-21562831,21563284-21563354,21563461-21563621
          Length = 312

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +1

Query: 595 TWYWESGXNWKRRPYWPSXVQ 657
           TW WE+G   KR+PY P   Q
Sbjct: 51  TWSWEAGDPSKRKPYLPPDKQ 71


>01_01_0700 -
           5413026-5413122,5413226-5413356,5413840-5413905,
           5413986-5414037,5414496-5414581,5414682-5414851,
           5414974-5415057,5415302-5415372,5415461-5415621
          Length = 305

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +1

Query: 595 TWYWESGXNWKRRPYWPSXVQ 657
           TW WE+G   KR+PY P   Q
Sbjct: 51  TWSWEAGDPSKRKPYLPPDKQ 71


>05_04_0450 -
           21356877-21356942,21357482-21358095,21358173-21358566,
           21358648-21358704
          Length = 376

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 21/82 (25%), Positives = 39/82 (47%)
 Frame = +2

Query: 122 WHLWYAADSDVPNDILEEQLYNSVVVADYDSAVEKSKHLYEEKKSEVITNVVNKLIRNNK 301
           + L  +A+ ++  DI E+  Y   V  DY+  +E S+     +KS  + +     I + +
Sbjct: 199 YSLTTSAEREIVRDIKEKLAY---VALDYEQELETSRSSSSVEKSYEMPDGQVITIGSER 255

Query: 302 MNCMEYAYQLWLQGLQGHRPGL 367
             C E  +Q  L G++   PG+
Sbjct: 256 FRCPEVLFQPSLVGMES--PGI 275


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,703,450
Number of Sequences: 37544
Number of extensions: 395317
Number of successful extensions: 1137
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1137
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2612387020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)