Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_N16
         (919 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z19153-3|CAA79547.1|  301|Caenorhabditis elegans Hypothetical pr...    31   0.87 
Z46934-11|CAE18043.1|  497|Caenorhabditis elegans Hypothetical p...    30   2.0  
Z46934-10|CAD18882.1|  495|Caenorhabditis elegans Hypothetical p...    30   2.0  
U13019-4|AAC24451.1|  222|Caenorhabditis elegans Hypothetical pr...    29   4.7  
U13019-3|AAC24452.2|  713|Caenorhabditis elegans Hypothetical pr...    29   4.7  
AF003148-8|AAB54211.2|  346|Caenorhabditis elegans Hypothetical ...    28   8.1  

>Z19153-3|CAA79547.1|  301|Caenorhabditis elegans Hypothetical
           protein C38C10.3 protein.
          Length = 301

 Score = 31.5 bits (68), Expect = 0.87
 Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
 Frame = +1

Query: 247 EEERSHHKCREQTDTKQQDELHGVRLSTLAPG---APRTSSGIVSQLSSDLSSPKTRLSL 417
           E   S++K ++  +  Q++      L+ +  G   A + SSG+VSQ+SS  SS + R +L
Sbjct: 56  ESPTSYNKYQKNVEPVQKENQKPKDLNKMTAGPHIAVKNSSGLVSQISSTTSSERKRRTL 115

Query: 418 CTSATVS 438
              ++ S
Sbjct: 116 ARPSSSS 122


>Z46934-11|CAE18043.1|  497|Caenorhabditis elegans Hypothetical
           protein ZK1320.12b protein.
          Length = 497

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +2

Query: 203 DYDSAVEKSKHLYEEKKSEVITNVVNKLIRNNKMNCM 313
           D D + EK +    +KK   IT++VN +IRN    C+
Sbjct: 205 DIDFSYEKVREAMSQKKRNGITSLVNYMIRNYPSICL 241


>Z46934-10|CAD18882.1|  495|Caenorhabditis elegans Hypothetical
           protein ZK1320.12a protein.
          Length = 495

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +2

Query: 203 DYDSAVEKSKHLYEEKKSEVITNVVNKLIRNNKMNCM 313
           D D + EK +    +KK   IT++VN +IRN    C+
Sbjct: 205 DIDFSYEKVREAMSQKKRNGITSLVNYMIRNYPSICL 241


>U13019-4|AAC24451.1|  222|Caenorhabditis elegans Hypothetical
           protein T12A2.15b protein.
          Length = 222

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +3

Query: 492 DGKDKTSPRVSWKLIALWENNKVYFKILNTERN 590
           D KD+ +P VS KL+AL  N +V+ K   T +N
Sbjct: 120 DKKDQCNPYVSVKLVALDGNKEVFKKKTPTAKN 152


>U13019-3|AAC24452.2|  713|Caenorhabditis elegans Hypothetical
           protein T12A2.15a protein.
          Length = 713

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +3

Query: 492 DGKDKTSPRVSWKLIALWENNKVYFKILNTERN 590
           D KD+ +P VS KL+AL  N +V+ K   T +N
Sbjct: 611 DKKDQCNPYVSVKLVALDGNKEVFKKKTPTAKN 643


>AF003148-8|AAB54211.2|  346|Caenorhabditis elegans Hypothetical
           protein F32B5.3 protein.
          Length = 346

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +2

Query: 104 LFYVFSWHLWYAADSDVPNDILEEQLY 184
           + Y F W   ++ DS+ PND+  E+L+
Sbjct: 303 MMYGFEWIDTFSGDSEQPNDLTSERLH 329


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,999,825
Number of Sequences: 27780
Number of extensions: 326052
Number of successful extensions: 976
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 976
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2349764032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)