Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_N10
(883 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF014940-5|AAB63937.1| 203|Caenorhabditis elegans Suppressor/en... 242 2e-64
AF039713-7|AAB96722.1| 203|Caenorhabditis elegans Hypothetical ... 109 3e-24
AL117207-7|CAB60397.1| 211|Caenorhabditis elegans Hypothetical ... 69 6e-12
Z74035-1|CAA98480.1| 204|Caenorhabditis elegans Hypothetical pr... 58 6e-09
Z68316-4|CAA92683.1| 234|Caenorhabditis elegans Hypothetical pr... 58 1e-08
AF100673-4|AAP13734.2| 438|Caenorhabditis elegans Hypothetical ... 31 0.83
Z77665-8|CAB01224.2| 135|Caenorhabditis elegans Hypothetical pr... 29 5.8
AF016656-3|AAB66037.2| 515|Caenorhabditis elegans Hypothetical ... 29 5.8
>AF014940-5|AAB63937.1| 203|Caenorhabditis elegans
Suppressor/enhancer of lin-12 protein9 protein.
Length = 203
Score = 242 bits (593), Expect = 2e-64
Identities = 113/200 (56%), Positives = 153/200 (76%), Gaps = 4/200 (2%)
Frame = +2
Query: 146 WLVVTLLNLVSNAYSYTVTVDAHAEECFYENVEADTKLGLSFEIAEGGFLDIDVIILGPD 325
W++ L V+ A SY + VDA+ E+CF++ + + TK+GL FE+AEGGFLDIDV I GPD
Sbjct: 6 WILAVLF--VTPAASYFIHVDANEEQCFFDRLTSGTKMGLMFEVAEGGFLDIDVKITGPD 63
Query: 326 GNVIHKAERESSGIYTFSAPTAGKYTYCFSNKMSSMTPKVVMFNLEIGEPQTK----SGN 493
I+K ERESSG +TF+A G YTYCF NKMS+MTPK VMF +EI EP + + N
Sbjct: 64 NKEIYKGERESSGKFTFAAHMDGVYTYCFGNKMSTMTPKAVMFTVEITEPHQQAPGAAAN 123
Query: 494 ENEADHNKLEDMIKELATTLRTIKHDQEYMXVRDRIHRSINESTNSRVVMWSIFEASVLL 673
++ AD+ KLE+M++EL++ L ++KH+QEYM VR+R+HR+INE+TNSRVVMW+ FEA VL+
Sbjct: 124 QDAADNAKLEEMVRELSSALMSVKHEQEYMEVRERVHRNINENTNSRVVMWAAFEAFVLV 183
Query: 674 VMTIGXVYYLKRFFEVXRVV 733
MT+G ++YLKRFFEV +V
Sbjct: 184 GMTVGQIFYLKRFFEVRTMV 203
>AF039713-7|AAB96722.1| 203|Caenorhabditis elegans Hypothetical
protein F57B10.5 protein.
Length = 203
Score = 109 bits (262), Expect = 3e-24
Identities = 57/195 (29%), Positives = 101/195 (51%), Gaps = 2/195 (1%)
Frame = +2
Query: 149 LVVTLLNLVSNAYSYTVTVDAHAEECFYENVEADTKLGLSFEIAEGGFLDIDVIILGPDG 328
+V ++L + + T + +A +CFYE+++ D F++ GG D+D+II P+G
Sbjct: 6 IVSSILVALGLSIELTFELPDNANQCFYEDLKKDVDTVFEFQVVTGGHYDVDLIIEDPNG 65
Query: 329 NVIHKAERESSGIYTFSAPTAGKYTYCFSNKMSSMTPKVVMFNLEIGEPQTKSGNENEAD 508
V++K ++ F A G Y CFSN+ S+ + K+V + + G+ +
Sbjct: 66 KVLYKDTKKQYDSINFKAEVEGTYKACFSNEFSTFSHKIVYMDWQFGDQNALHAAVTQGA 125
Query: 509 H--NKLEDMIKELATTLRTIKHDQEYMXVRDRIHRSINESTNSRVVMWSIFEASVLLVMT 682
H +LE+ + LRTI Q + +R+ R E N RV++WS+ +++V++ +
Sbjct: 126 HAMTQLENYAVAIGDKLRTIDDYQTHHRLREATGRKRAEELNERVMIWSLGQSAVVVFIG 185
Query: 683 IGXVYYLKRFFEVXR 727
IG V+ LK FF R
Sbjct: 186 IGQVFLLKSFFNDKR 200
>AL117207-7|CAB60397.1| 211|Caenorhabditis elegans Hypothetical
protein Y60A3A.9 protein.
Length = 211
Score = 68.5 bits (160), Expect = 6e-12
Identities = 53/209 (25%), Positives = 98/209 (46%), Gaps = 14/209 (6%)
Frame = +2
Query: 149 LVVTLLNLVSNAYSYTVTVDAHAEECFYENVEADTKLGLSFEIA-----EGGFLD----- 298
L++ LL+L + A S + ++CF E + +T + ++++ G+ D
Sbjct: 3 LLIALLSLATYADSLYFHIAETEKKCFIEEIPDETMVTGNYKVQLYDPNTKGYGDYPNIG 62
Query: 299 IDVIILGPDGNVIHKAERESSGIYTFSAPTAGKYTYC-FSNKMSSMTPKVVMFNLEIGEP 475
+ V + P+ VI + G +TF++ T G++ C +SN + + +L+I
Sbjct: 63 MHVEVKDPEDKVILSKLYTAEGRFTFTSNTPGEHVICIYSNSTAWFNGAQLRVHLDIQAG 122
Query: 476 QTKSGNENEADHNKLEDM---IKELATTLRTIKHDQEYMXVRDRIHRSINESTNSRVVMW 646
A +KL ++ I++L + I +Q Y R+ R +ESTNSRV W
Sbjct: 123 DHAQDYAQIAQKDKLNELQLRIRQLLDQVDQITKEQNYQRYREERFRQTSESTNSRVFYW 182
Query: 647 SIFEASVLLVMTIGXVYYLKRFFEVXRVV 733
SI + VL + + +L+ FFE ++V
Sbjct: 183 SIAQVVVLAITGAWQMRHLRGFFEAKKLV 211
>Z74035-1|CAA98480.1| 204|Caenorhabditis elegans Hypothetical
protein F47G9.1 protein.
Length = 204
Score = 58.4 bits (135), Expect = 6e-09
Identities = 48/200 (24%), Positives = 90/200 (45%), Gaps = 6/200 (3%)
Frame = +2
Query: 152 VVTLLNLVSNAYSYTVTVDAHAEECFYENVEADTKLGLSFEIAEGGFLDIDVIILGPDGN 331
+V L+ + A+S V ++C E + + + +E ++G + + G+
Sbjct: 4 LVIFLSAIVLAHSLRFYVPPKEKKCLKEEIHKNVVVTGEYEFSQGIQYTGSIHVTDTRGH 63
Query: 332 VIHKAER--ESSGIYTFSAPTAGKYTYCFSNKMSSMTP---KVVMFNLEIGEPQTKSGNE 496
++K E + G + F+A + C N + P + V L+ G +
Sbjct: 64 TLYKRENFADLKGKFAFTADEYDIFEICIENHPPAGHPGEKREVSLILKHGVEAKNYDDI 123
Query: 497 NEADHNK-LEDMIKELATTLRTIKHDQEYMXVRDRIHRSINESTNSRVVMWSIFEASVLL 673
+A+ K LE ++ L +I D +M R+ R+ NESTNSRV+ SIF LL
Sbjct: 124 AKAEKLKPLEVELRRLEDMADSITKDFAFMRQREEEMRNTNESTNSRVLYLSIFSMLCLL 183
Query: 674 VMTIGXVYYLKRFFEVXRVV 733
+ I V +L+ +F+ +++
Sbjct: 184 GLAIWQVLFLRNYFKSKKLI 203
>Z68316-4|CAA92683.1| 234|Caenorhabditis elegans Hypothetical
protein K08E4.6 protein.
Length = 234
Score = 57.6 bits (133), Expect = 1e-08
Identities = 47/203 (23%), Positives = 92/203 (45%), Gaps = 20/203 (9%)
Frame = +2
Query: 170 LVSNAYSYTVTVDAHAEECFYENVE-ADTK-LGLSFEIAEGGFLDIDVIILGPDGNVIHK 343
++ Y +TV V A +CF++ V+ A K L + +++ +GG L+I+ +IL N++ +
Sbjct: 18 ILCGEYDFTVEVPAGKFQCFFQPVDLAKHKTLEVDYQVIDGGDLNINFMILH-GANILKQ 76
Query: 344 AERESSGIYTFSAPTAGKYTYCFSNKMSSMTPKVVMF---------NLEIGE--PQTKSG 490
+ + G + G Y CF N S + KVV F NL+ + ++
Sbjct: 77 DQLKVDGSHRIELNQPGDYQVCFDNSFSYQSRKVVFFEIFLFDAHGNLDEADLSAMARTD 136
Query: 491 NENEADHNKLEDMIKE-------LATTLRTIKHDQEYMXVRDRIHRSINESTNSRVVMWS 649
++ A N+L I E + L +++ Q + + R++ + RV WS
Sbjct: 137 SDLSAKMNELGVTIDEFHRRANGIKNNLNKVEYHQALLRAHEARDRAVMSANFDRVTFWS 196
Query: 650 IFEASVLLVMTIGXVYYLKRFFE 718
+ V++ + V+ ++ FE
Sbjct: 197 VVHTLVMVGVAGVQVFMIRSLFE 219
>AF100673-4|AAP13734.2| 438|Caenorhabditis elegans Hypothetical
protein Y66H1B.5 protein.
Length = 438
Score = 31.5 bits (68), Expect = 0.83
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 5/75 (6%)
Frame = +2
Query: 269 FEIAE-GGFLDIDVIILGPDGN--VIHKAERESSGIYTFSAPT--AGKYTYCFSNKMSSM 433
F++ + G I+ + GPDG + H E +GIY S PT AG+Y F +
Sbjct: 269 FDVRDCGNVKKIESRVFGPDGKERLNHVRSTEQNGIYDVSFPTDMAGEYCVVFYINGQEV 328
Query: 434 TPKVVMFNLEIGEPQ 478
+V + +IG +
Sbjct: 329 AARVPVMAEKIGRKE 343
>Z77665-8|CAB01224.2| 135|Caenorhabditis elegans Hypothetical
protein K02E11.7 protein.
Length = 135
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +1
Query: 523 GHDQRTCYYIKNYQTRSRVYAGA*SY 600
G +++TC Y +N QT+++V AG +Y
Sbjct: 72 GKNKKTCGYWENIQTKAKVVAGKTTY 97
>AF016656-3|AAB66037.2| 515|Caenorhabditis elegans Hypothetical
protein C35A11.4 protein.
Length = 515
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -1
Query: 574 LIVFDXXXXXSKFFDHVLKFIMVSFIFITRF 482
LI+F KF +HVL FI++ FI I F
Sbjct: 348 LIIFALMFTFYKFENHVLGFILICFICIFTF 378
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,616,099
Number of Sequences: 27780
Number of extensions: 344830
Number of successful extensions: 779
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 775
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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