Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_N06
         (892 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC031263-1|AAH31263.1|  252|Homo sapiens similar to CG12314 gene...    61   5e-09
AK090899-1|BAC03541.1|  252|Homo sapiens protein ( Homo sapiens ...    61   6e-09
AL022318-5|CAI17899.1|  386|Homo sapiens protein ( Human DNA seq...    31   5.6  

>BC031263-1|AAH31263.1|  252|Homo sapiens similar to CG12314 gene
           product protein.
          Length = 252

 Score = 61.3 bits (142), Expect = 5e-09
 Identities = 24/80 (30%), Positives = 46/80 (57%)
 Frame = +1

Query: 466 SMDRFLHYLASPKYSLDVCIYVFTNSDIANVLLKLHYKGIKIRIIIDADMAYCTGSNLRR 645
           ++ R L  L + + SLD+C++ F++  + + +  LH +G+++R++ D D     GS +  
Sbjct: 79  ALSRLLRALLAARASLDLCLFAFSSPQLGHAVQLLHQRGVRVRVVTDCDYMALNGSQIGL 138

Query: 646 MERQGIPVRWMKSTNLMHHK 705
           + + GI VR  +    MHHK
Sbjct: 139 LRKAGIQVRHDQDPGYMHHK 158


>AK090899-1|BAC03541.1|  252|Homo sapiens protein ( Homo sapiens
           cDNA FLJ33580 fis, clone BRAMY2011841. ).
          Length = 252

 Score = 60.9 bits (141), Expect = 6e-09
 Identities = 24/80 (30%), Positives = 45/80 (56%)
 Frame = +1

Query: 466 SMDRFLHYLASPKYSLDVCIYVFTNSDIANVLLKLHYKGIKIRIIIDADMAYCTGSNLRR 645
           ++ R L  L + + SLD+C++ F++  +   +  LH +G+++R++ D D     GS +  
Sbjct: 79  ALSRLLRALLAARASLDLCLFAFSSPQLGRAVQLLHQRGVRVRVVTDCDYMALNGSQIGL 138

Query: 646 MERQGIPVRWMKSTNLMHHK 705
           + + GI VR  +    MHHK
Sbjct: 139 LRKAGIQVRHDQDPGYMHHK 158


>AL022318-5|CAI17899.1|  386|Homo sapiens protein ( Human DNA
           sequence from clone CTA-150C2 on chromosome
           22q13.1-13.2. ).
          Length = 386

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +1

Query: 523 IYVFTNSDIANVLLKLHYKGIKIRIIIDADMAYC 624
           +Y + + D   VLL+LH  G +++I+   D AYC
Sbjct: 135 LYYYRDRDWRWVLLRLHKAGARVKIMDYEDFAYC 168


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,164,554
Number of Sequences: 237096
Number of extensions: 1889040
Number of successful extensions: 6264
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6264
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11437206932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)