Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_M20
(963 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 49 9e-07
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 42 1e-04
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 41 2e-04
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 38 0.002
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 38 0.003
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 35 0.020
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 35 0.020
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 31 0.24
SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyc... 30 0.42
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 30 0.42
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 0.74
SPAC6C3.02c |||CHCH domain protein|Schizosaccharomyces pombe|chr... 27 5.2
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 9.1
SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces pomb... 26 9.1
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 26 9.1
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 49.2 bits (112), Expect = 9e-07
Identities = 33/114 (28%), Positives = 37/114 (32%), Gaps = 1/114 (0%)
Frame = +1
Query: 484 AAPPXXXPAPXPPRPXPXPXTPXXXXPAAFRXXP-PRRXAPPXPXRXXPXPXPXAXXGPP 660
A PP P+ PP P P P P+ P P APP P P P P
Sbjct: 1110 AVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAP 1169
Query: 661 APXWXXXPAXVAGXXSXPAGPAGXPPXPXXXXPX*PXXXGXRXXPIPPXXAXPP 822
PA +G P AG PP P P+PP PP
Sbjct: 1170 P-----VPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPP 1218
Score = 45.2 bits (102), Expect = 1e-05
Identities = 34/121 (28%), Positives = 38/121 (31%), Gaps = 9/121 (7%)
Frame = +1
Query: 487 APPXXXPAPXPPRPXPXPXTPXXXXPAAFRXXPPRRXAP-------PXPXRXXPXPXPXA 645
APP P+ PP P P P + PP AP P P P P P
Sbjct: 1031 APPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSG 1090
Query: 646 XXGPPAPXWXXXPAXVAGXXSXPA-GPAGXPPXPXXXXPX*PXXXGXRXXPIP-PXXAXP 819
P P P P P+G PP P P P+P P A P
Sbjct: 1091 IPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAP 1150
Query: 820 P 822
P
Sbjct: 1151 P 1151
Score = 41.9 bits (94), Expect = 1e-04
Identities = 29/93 (31%), Positives = 33/93 (35%), Gaps = 6/93 (6%)
Frame = +1
Query: 484 AAPPXXXPAPXPPRPXPXPXTPXXXXPAAFRXXPPRRXA--PPXPXRXXPXPXPXAXXG- 654
AAPP P+ PP P P P P++ P+ A PP P P P G
Sbjct: 1148 AAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGV 1207
Query: 655 ---PPAPXWXXXPAXVAGXXSXPAGPAGXPPXP 744
PP P AG P A PP P
Sbjct: 1208 PPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVP 1240
Score = 41.5 bits (93), Expect = 2e-04
Identities = 35/116 (30%), Positives = 39/116 (33%), Gaps = 4/116 (3%)
Frame = +1
Query: 484 AAPPXXXPAPXPPRPXPXPXTPXXXXPAAFRXXP-PRRXAPPXPXRXX---PXPXPXAXX 651
AAPP P+ PP P P P P+ P P APP P P P P A
Sbjct: 1129 AAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGV 1188
Query: 652 GPPAPXWXXXPAXVAGXXSXPAGPAGXPPXPXXXXPX*PXXXGXRXXPIPPXXAXP 819
PP P P A P+ P P P G P+P A P
Sbjct: 1189 -PPVP-----PPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPP 1238
Score = 31.9 bits (69), Expect = 0.14
Identities = 33/120 (27%), Positives = 36/120 (30%), Gaps = 9/120 (7%)
Frame = +1
Query: 490 PPXXXPAPXPPRPXPXPXTPXXXXPAAFRXXPPRRXAPPXPXRXXPXPXPXAXXGPPAPX 669
P PA R P P P P APP P P P PP P
Sbjct: 999 PVSTSPAAPLARVPPVPKLSSKAPPVPL----PSADAPPIPVPSTAPPVPIPTSTPPVPK 1054
Query: 670 W--------XXXPAXVAGXXSXPAGPAGXPPXPXXXXPX*PXXXGXRXXPIP-PXXAXPP 822
PA + S PA P+G PP P P+P P A PP
Sbjct: 1055 SSSGAPSAPPPVPAPSSEIPSIPA-PSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPP 1113
Score = 29.9 bits (64), Expect = 0.56
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +2
Query: 572 SXXXPRGAXPXPXPAAXXPSPGPXPXRXPPPPXGGXXPP 688
S P GA P P P+ P P P P P PP
Sbjct: 1075 SIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPP 1113
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 41.9 bits (94), Expect = 1e-04
Identities = 25/55 (45%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = -2
Query: 362 GXGXGGGGXGGXGGGXAXGGGGGXGGXXGGGXXXXKXXR-GPGXXKXG-GGXXGG 204
G G GG GG GG G GGG GG GGG + R G G + G GG GG
Sbjct: 10 GRGGSRGGRGGFNGGRG-GFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGG 63
Score = 41.9 bits (94), Expect = 1e-04
Identities = 23/54 (42%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = -2
Query: 362 GXGXGGGGXGGXGGGXAXGGGGGXGGXXGGGXXXXKXXRGPGXXKXG-GGXXGG 204
G G GG GG GGG GGG GG GG G G G GG GG
Sbjct: 17 GRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
Score = 34.3 bits (75), Expect = 0.026
Identities = 20/46 (43%), Positives = 21/46 (45%), Gaps = 4/46 (8%)
Frame = -2
Query: 362 GXGXGG--GGXGGXGG--GXAXGGGGGXGGXXGGGXXXXKXXRGPG 237
G G GG GG GG GG G G GG GG GG + R G
Sbjct: 37 GGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGGAKVIIEPHRHAG 82
Score = 33.1 bits (72), Expect = 0.060
Identities = 19/50 (38%), Positives = 20/50 (40%)
Frame = -2
Query: 356 GXGGGGXGGXGGGXAXGGGGGXGGXXGGGXXXXKXXRGPGXXKXGGGXXG 207
G GG GG GG GG GG GG GG + G GG G
Sbjct: 9 GGRGGSRGGRGG--FNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGG 56
Score = 32.3 bits (70), Expect = 0.10
Identities = 22/61 (36%), Positives = 22/61 (36%)
Frame = -2
Query: 665 GAGGPXXAXGXGXGXXRXGXGGAXRRGGXXRKAAGXXXXGVXGXGXGRGGXGAGXXXGGA 486
G GG G G R G GG RGG G G G G RGG G G
Sbjct: 10 GRGGSRGGRG-GFNGGRGGFGGG--RGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGG 66
Query: 485 A 483
A
Sbjct: 67 A 67
Score = 28.7 bits (61), Expect = 1.3
Identities = 19/54 (35%), Positives = 19/54 (35%)
Frame = -2
Query: 665 GAGGPXXAXGXGXGXXRXGXGGAXRRGGXXRKAAGXXXXGVXGXGXGRGGXGAG 504
G G G G G R G G R G R G G G GRGG G
Sbjct: 20 GFNGGRGGFGGGRGGARGGGRGGARGG---RGGRGGARGGRGGSSGGRGGAKGG 70
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 41.1 bits (92), Expect = 2e-04
Identities = 27/92 (29%), Positives = 31/92 (33%)
Frame = +1
Query: 484 AAPPXXXPAPXPPRPXPXPXTPXXXXPAAFRXXPPRRXAPPXPXRXXPXPXPXAXXGPPA 663
AAPP AP PP P P P P APP P + P P PA
Sbjct: 122 AAPPS---APAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPA 178
Query: 664 PXWXXXPAXVAGXXSXPAGPAGXPPXPXXXXP 759
P+ + + P P PP P P
Sbjct: 179 APVKSPPSAPSLPSAVPPMPPKVPPPPLSQAP 210
Score = 35.1 bits (77), Expect = 0.015
Identities = 30/100 (30%), Positives = 33/100 (33%), Gaps = 5/100 (5%)
Frame = +1
Query: 484 AAPPXXXPAPXPPRPXPXPXTPXXXXPAAFRXXPPRRXAPPX--PXRXXPXPXPXAXXGP 657
+APP P+ PP P P P P PP + A P P P P
Sbjct: 142 SAPPR--PSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPP 199
Query: 658 PAPXWXXXPAXVAGXXSXP---AGPAGXPPXPXXXXPX*P 768
P A VA S P A PAG P P P
Sbjct: 200 KVPPPPLSQAPVANTSSRPSSFAPPAGHAPNVTSESPKFP 239
Score = 26.6 bits (56), Expect = 5.2
Identities = 13/34 (38%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Frame = +3
Query: 204 PPPXXPTX-LXGPRAPPXFPXXA-PXPPXPPXPP 299
PPP P + P + P P P PP P PP
Sbjct: 172 PPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 38.3 bits (85), Expect = 0.002
Identities = 35/129 (27%), Positives = 38/129 (29%), Gaps = 13/129 (10%)
Frame = +1
Query: 475 GRXAAPPXXXPAPXPPRPXPXPXTPXXXXPAAFRXXPPRRXAPP--XPXRXXPXPXPXAX 648
G PP AP PP P P T P + APP P R P P
Sbjct: 349 GSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGN 408
Query: 649 XG----PPAPXWXXXPAXV------AGXXSXPAGPAGXPPXPXXXXPX*PXXXG-XRXXP 795
PP P P + S P G PP P P G P
Sbjct: 409 ASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPP 468
Query: 796 IPPXXAXPP 822
+PP PP
Sbjct: 469 LPPAAPAPP 477
Score = 34.3 bits (75), Expect = 0.026
Identities = 21/61 (34%), Positives = 23/61 (37%), Gaps = 2/61 (3%)
Frame = +1
Query: 490 PPXXXPAPXPPRPXPXPXTPXXXXPAAFRXXPPRRXAPPXPXRXXPXP--XPXAXXGPPA 663
PP P+ P P P + PAA P APP P P P A PPA
Sbjct: 420 PPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPA 479
Query: 664 P 666
P
Sbjct: 480 P 480
Score = 31.9 bits (69), Expect = 0.14
Identities = 18/64 (28%), Positives = 22/64 (34%)
Frame = +1
Query: 475 GRXAAPPXXXPAPXPPRPXPXPXTPXXXXPAAFRXXPPRRXAPPXPXRXXPXPXPXAXXG 654
G ++ P P PPR P + PP R AP + P A
Sbjct: 328 GNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSN 387
Query: 655 PPAP 666
PPAP
Sbjct: 388 PPAP 391
Score = 31.5 bits (68), Expect = 0.18
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +3
Query: 192 GKXXPPPXXPTXLXGPRAPPXFPXXAPXPPXPPXPP 299
G PP P+ P P P P PP P PP
Sbjct: 442 GAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPP 477
Score = 27.5 bits (58), Expect = 3.0
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 2/33 (6%)
Frame = +3
Query: 204 PP--PXXPTXLXGPRAPPXFPXXAPXPPXPPXP 296
PP P P G A P P AP PP P P
Sbjct: 450 PPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAP 482
Score = 26.2 bits (55), Expect = 6.9
Identities = 22/82 (26%), Positives = 24/82 (29%)
Frame = +1
Query: 478 RXAAPPXXXPAPXPPRPXPXPXTPXXXXPAAFRXXPPRRXAPPXPXRXXPXPXPXAXXGP 657
R + PP P PP P P P+ P PP P P P
Sbjct: 411 RTSTPPVPTPPSLPPSAPPS--LPPSAPPSLPMGAPAAPPLPPSAPIAPPLP-AGMPAAP 467
Query: 658 PAPXWXXXPAXVAGXXSXPAGP 723
P P PA PA P
Sbjct: 468 PLP--PAAPAPPPAPAPAPAAP 487
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 37.5 bits (83), Expect = 0.003
Identities = 18/30 (60%), Positives = 18/30 (60%)
Frame = -2
Query: 362 GXGXGGGGXGGXGGGXAXGGGGGXGGXXGG 273
G G GGG GG GGG G GGG GG GG
Sbjct: 236 GPGGFGGGPGGFGGGLG-GFGGGPGGFGGG 264
Score = 36.7 bits (81), Expect = 0.005
Identities = 25/55 (45%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = -2
Query: 362 GXGXGGGGXGGXGGGXAX-GGG-GGXGGXXGGGXXXXKXXRGPGXXKXGGGXXGG 204
G G GGG GG GG GGG GG GG GG GPG G G GG
Sbjct: 222 GHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGG------FGGGPGGFGGGPGGHGG 270
Score = 36.7 bits (81), Expect = 0.005
Identities = 18/31 (58%), Positives = 18/31 (58%)
Frame = -2
Query: 362 GXGXGGGGXGGXGGGXAXGGGGGXGGXXGGG 270
G G GGG GG GGG G GGG GG G G
Sbjct: 243 GPGGFGGGLGGFGGGPG-GFGGGPGGHGGPG 272
Score = 36.3 bits (80), Expect = 0.006
Identities = 25/56 (44%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Frame = -2
Query: 356 GXGG-GGXGGXGG-GXAXGGGGGX-GGXXGGGXXXXKXXRGPGXXKXGGGXXGGXP 198
G GG GG GG GG G GG GG GG G GPG G G GG P
Sbjct: 203 GPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGP 258
Score = 32.3 bits (70), Expect = 0.10
Identities = 23/58 (39%), Positives = 24/58 (41%), Gaps = 7/58 (12%)
Frame = -2
Query: 350 GGGGXG-GXGGGXAXGGGGGXGGXXG-GGXXXXKXXR-----GPGXXKXGGGXXGGXP 198
GGG G G G G G GG GG G GG GPG + G G GG P
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGP 244
Score = 31.5 bits (68), Expect = 0.18
Identities = 24/64 (37%), Positives = 24/64 (37%), Gaps = 6/64 (9%)
Frame = -2
Query: 371 PWXGXGXGGGGXGGXG----GGXAXGGGGG--XGGXXGGGXXXXKXXRGPGXXKXGGGXX 210
P G G GG GG G G GGG G GG G G G G G G
Sbjct: 202 PGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGF 261
Query: 209 GGXP 198
GG P
Sbjct: 262 GGGP 265
Score = 29.1 bits (62), Expect = 0.98
Identities = 19/53 (35%), Positives = 19/53 (35%)
Frame = -2
Query: 356 GXGGGGXGGXGGGXAXGGGGGXGGXXGGGXXXXKXXRGPGXXKXGGGXXGGXP 198
G GGG GG GGG G GG G G G G GG P
Sbjct: 184 GHNGGGFGGF------GGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGP 230
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 34.7 bits (76), Expect = 0.020
Identities = 21/51 (41%), Positives = 21/51 (41%)
Frame = -2
Query: 356 GXGGGGXGGXGGGXAXGGGGGXGGXXGGGXXXXKXXRGPGXXKXGGGXXGG 204
G GG GG GG G GGG G GGG RG GG GG
Sbjct: 145 GGRGGSRGGFGGNSRGGFGGGSRGGFGGG------SRGGSRGGFRGGSRGG 189
Score = 26.2 bits (55), Expect = 6.9
Identities = 21/58 (36%), Positives = 22/58 (37%), Gaps = 1/58 (1%)
Frame = -2
Query: 656 GPXXAXGXGXGXXRXGXGGAXRRG-GXXRKAAGXXXXGVXGXGXGRGGXGAGXXXGGA 486
GP G G G G R G G R G G G G RGG G G GG+
Sbjct: 123 GPKKPKGARNGPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGG-SRGGFGGG-SRGGS 178
Score = 26.2 bits (55), Expect = 6.9
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -2
Query: 362 GXGXGGGGXGGXGGGXAXGGGGGXGGXXG 276
G GG G G GG GG GG G
Sbjct: 164 GGSRGGFGGGSRGGSRGGFRGGSRGGFRG 192
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 34.7 bits (76), Expect = 0.020
Identities = 15/31 (48%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = +2
Query: 599 PXPXPAAXXPSPGPXPXRXPPP-PXGGXXPP 688
P P PA P+P P P PPP P G PP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPP 763
Score = 30.7 bits (66), Expect = 0.32
Identities = 20/59 (33%), Positives = 21/59 (35%)
Frame = +1
Query: 487 APPXXXPAPXPPRPXPXPXTPXXXXPAAFRXXPPRRXAPPXPXRXXPXPXPXAXXGPPA 663
+PP PA P P P P PA PP PP P P P PPA
Sbjct: 731 SPPPPPPAVIVPTPAPAPIP--VPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP---PPA 784
Score = 29.9 bits (64), Expect = 0.56
Identities = 27/81 (33%), Positives = 28/81 (34%), Gaps = 2/81 (2%)
Frame = +1
Query: 508 APXPPRPXPXPXTPXXXXPAAFRXXPPR--RXAPPXPXRXXPXPXPXAXXGPPAPXWXXX 681
+P PP P TP PA PP PP P P P A GPP P
Sbjct: 731 SPPPPPPAVIVPTPA---PAPIPVPPPAPIMGGPPPP----PPPPGVAGAGPPPPP-PPP 782
Query: 682 PAXVAGXXSXPAGPAGXPPXP 744
PA AG A P P
Sbjct: 783 PAVSAGGSRYYAPAPQAEPEP 803
Score = 29.9 bits (64), Expect = 0.56
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +3
Query: 207 PPXXPTXLXGPRAPPXFPXXAPXPPXPPXPP 299
PP P + GP PP P A P PP PP
Sbjct: 752 PPPAPI-MGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 29.5 bits (63), Expect = 0.74
Identities = 14/36 (38%), Positives = 15/36 (41%), Gaps = 4/36 (11%)
Frame = +3
Query: 204 PPPXXPTXLXGPRAPPXFPXXAPXP----PXPPXPP 299
PPP P + AP P P P P PP PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP 767
Score = 26.6 bits (56), Expect = 5.2
Identities = 12/46 (26%), Positives = 14/46 (30%)
Frame = +2
Query: 590 GAXPXPXPAAXXPSPGPXPXRXPPPPXGGXXPPXWRXRXPXXPXPR 727
G P P P GP P PPP + P P+
Sbjct: 759 GGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEPEPK 804
Score = 26.2 bits (55), Expect = 6.9
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +2
Query: 362 PPXXPXPXPPPXTPPPPXPXG 424
PP P PP PPPP G
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAG 772
Score = 26.2 bits (55), Expect = 6.9
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +2
Query: 362 PPXXPXPXPPPXTPPPP 412
PP PPP PPPP
Sbjct: 767 PPGVAGAGPPPPPPPPP 783
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 31.1 bits (67), Expect = 0.24
Identities = 16/31 (51%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = -2
Query: 362 GXGXGGGGXGGXGGGXAXGG-GGGXGGXXGG 273
G G GG GG GG GG GGG G GG
Sbjct: 448 GSRGGRGGFGGRGGFGGRGGFGGGRGRGRGG 478
Score = 31.1 bits (67), Expect = 0.24
Identities = 15/30 (50%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Frame = -2
Query: 356 GXGG-GGXGGXGGGXAXGGGGGXGGXXGGG 270
G GG GG GG GGG G GG G G
Sbjct: 458 GRGGFGGRGGFGGGRGRGRGGARSGNPNRG 487
Score = 29.1 bits (62), Expect = 0.98
Identities = 20/52 (38%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Frame = -2
Query: 347 GGGXGGXGGGXAXGGGGGXGGXXGGGXXXXKXXRGPGXXKXGGGXXGG-XPF 195
GGG G GG GG G G GGG RG G + G G PF
Sbjct: 446 GGGSRGGRGGFGGRGGFGGRGGFGGG-----RGRGRGGARSGNPNRGSVAPF 492
Score = 27.9 bits (59), Expect = 2.3
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -3
Query: 682 GXXXXXGRGXPXXRGAXGXXGGGXXRXGRXAAGAXXGRP 566
G GRG RG G GG GR GA G P
Sbjct: 446 GGGSRGGRGGFGGRGGFGGRGGFGGGRGRGRGGARSGNP 484
>SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 30.3 bits (65), Expect = 0.42
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -2
Query: 362 GXGXGGGGXGGXGGGXAXGGGGGXGGXXG 276
G G GG G GG GG G GG G
Sbjct: 225 GGGLGGAGLGGLGGAGLGGFGGANNATAG 253
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 30.3 bits (65), Expect = 0.42
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 362 PPXXPXPXPPPXTPPPPXPXG 424
PP P PP PPPP P G
Sbjct: 11 PPPPPPGFEPPSQPPPPPPPG 31
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.5 bits (63), Expect = 0.74
Identities = 17/52 (32%), Positives = 19/52 (36%)
Frame = +2
Query: 584 PRGAXPXPXPAAXXPSPGPXPXRXPPPPXGGXXPPXWRXRXPXXPXPRGXXP 739
P+ A P P P+P P P PPPP P P P P P
Sbjct: 1694 PQSAAP---PQMSAPTPPPPPMSVPPPP-SAPPMPAGPPSAPPPPLPASSAP 1741
Score = 28.7 bits (61), Expect = 1.3
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = +3
Query: 207 PPXXPTXLXGPRAPPXFPXXAPXPPXPPXP 296
PP P + P + P P P P PP P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 28.7 bits (61), Expect = 1.3
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 362 PPXXPXPXPPPXTPPPPXP 418
P P P PP PPPP P
Sbjct: 1718 PSAPPMPAGPPSAPPPPLP 1736
Score = 27.5 bits (58), Expect = 3.0
Identities = 18/53 (33%), Positives = 18/53 (33%), Gaps = 1/53 (1%)
Frame = +1
Query: 484 AAPPXXXPAPXPPRPXPXPXTPXXXXPAAFRXXPPRRXAPPXPXRXXP-XPXP 639
AAPP PP P P P A PP PP P P P P
Sbjct: 1697 AAPPQMSAPTPPPPPMSVPPPPSAPPMPA---GPPSAPPPPLPASSAPSVPNP 1746
Score = 26.6 bits (56), Expect = 5.2
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +3
Query: 204 PPPXXPTXLXGPRAPPXFPXXAPXPPXPPXP 296
PPP P GP + P P A P P P
Sbjct: 1716 PPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 26.2 bits (55), Expect = 6.9
Identities = 25/117 (21%), Positives = 29/117 (24%)
Frame = +1
Query: 484 AAPPXXXPAPXPPRPXPXPXTPXXXXPAAFRXXPPRRXAPPXPXRXXPXPXPXAXXGPPA 663
A+ P AP P P P P P P P P + PPA
Sbjct: 1430 ASQPTNPGAPSNHAPQVVPPAPMHAVAPVQPKAPGMVTNAPAPSSAPAPPAPVSQL-PPA 1488
Query: 664 PXWXXXPAXVAGXXSXPAGPAGXPPXPXXXXPX*PXXXGXRXXPIPPXXAXPPHXAL 834
P+ + P P P P PP P AL
Sbjct: 1489 VPNVPVPSMIPSVAQQPPSSVAPATAPSSTLPPSQSSFAHVPSPAPPAPQHPSAAAL 1545
Score = 26.2 bits (55), Expect = 6.9
Identities = 14/51 (27%), Positives = 16/51 (31%)
Frame = +2
Query: 572 SXXXPRGAXPXPXPAAXXPSPGPXPXRXPPPPXGGXXPPXWRXRXPXXPXP 724
S P+ + P P P P P P P PP P P P
Sbjct: 1696 SAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
>SPAC6C3.02c |||CHCH domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 172
Score = 26.6 bits (56), Expect = 5.2
Identities = 14/47 (29%), Positives = 15/47 (31%)
Frame = +1
Query: 526 PXPXPXTPXXXXPAAFRXXPPRRXAPPXPXRXXPXPXPXAXXGPPAP 666
P P P A P PP P R P P A G +P
Sbjct: 9 PPPRRAAPARSASTAAALPPRTMAPPPAPSRVQQAPPPTAVQGGSSP 55
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 25.8 bits (54), Expect = 9.1
Identities = 22/88 (25%), Positives = 25/88 (28%), Gaps = 3/88 (3%)
Frame = +1
Query: 490 PPXXXPAPXPPRPXPXPXTPXXXXPAA---FRXXPPRRXAPPXPXRXXPXPXPXAXXGPP 660
PP P P P P P P P + + P R + P P PP
Sbjct: 224 PPTYTPKQADPLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQPP 283
Query: 661 APXWXXXPAXVAGXXSXPAGPAGXPPXP 744
P G S A PP P
Sbjct: 284 RPP-TNASTRSTGTSSSMAHSYDSPPSP 310
>SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1334
Score = 25.8 bits (54), Expect = 9.1
Identities = 14/45 (31%), Positives = 16/45 (35%), Gaps = 2/45 (4%)
Frame = +1
Query: 484 AAPPXXXPAPXPPRPXPXPXTPXXXXPAAFR--XXPPRRXAPPXP 612
+ P PAP +P P P P FR P PP P
Sbjct: 35 STPAFMEPAPVSKKPLPPPTRRLPRKPLPFRSTSLQPPSSQPPAP 79
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 25.8 bits (54), Expect = 9.1
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +2
Query: 599 PXPXPAAXXPSPGPXPXRXPPPP 667
P PA P+P P PPPP
Sbjct: 725 PQVTPAPPTPAPTPAVKHHPPPP 747
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,458,873
Number of Sequences: 5004
Number of extensions: 20456
Number of successful extensions: 436
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 257
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 493304942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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