Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_M18
         (877 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624...    31   0.92 
08_01_0028 - 204534-205040,205247-205440,205565-205745                 31   1.6  
01_06_0006 - 25517892-25517935,25518156-25518276,25518598-255187...    30   2.8  
12_01_1025 - 10506144-10506226,10506643-10506699,10507502-105076...    28   8.5  
03_06_0690 - 35571816-35572586                                         28   8.5  

>03_02_0186 -
           6243487-6243799,6243892-6244400,6244495-6244557,
           6245482-6245681,6246125-6246519,6246776-6246888
          Length = 530

 Score = 31.5 bits (68), Expect = 0.92
 Identities = 15/25 (60%), Positives = 15/25 (60%)
 Frame = +1

Query: 457 CLFCACASQSRSILVCLLHRCYPAP 531
           CLFC     SR ILVC L RC  AP
Sbjct: 58  CLFCEANFISRRILVCDLLRCLVAP 82


>08_01_0028 - 204534-205040,205247-205440,205565-205745
          Length = 293

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 13/49 (26%), Positives = 29/49 (59%)
 Frame = +3

Query: 588 MNMEVLQKIYVXKMXPWPHFILKPQPKYGIHKGKRPTSVYQANYPKRRF 734
           ++++++Q++ + ++ PW    L+ + KYG H G   T  Y  +Y  R++
Sbjct: 41  IDLDIIQELDLYRIEPWD---LQERCKYGGHGGDEQTEWYFFSYKDRKY 86


>01_06_0006 -
           25517892-25517935,25518156-25518276,25518598-25518733,
           25519189-25519280,25519358-25519426,25519710-25519821,
           25519897-25520015,25520302-25520355,25520811-25520891,
           25520968-25521051,25521124-25521315,25521633-25521746,
           25521832-25521978,25522066-25522302,25522762-25522810,
           25522894-25523027,25523124-25523324,25523532-25523701,
           25523773-25523875,25524198-25524361,25525015-25525055,
           25525144-25525187
          Length = 835

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 11/97 (11%)
 Frame = +2

Query: 146 TIKSKNVDAVFVEKQKKILSFFQDVSQLNTDDEYYK-------IGKDYDIEMNMDNYTNK 304
           ++ ++ VD V+   Q+K +  ++ ++    ++  Y+       I K    E +   Y NK
Sbjct: 645 SLDNQCVDRVYRIGQEKNVIIYRLITSCTIEERIYEKQVSKEGIFKAATEERDFRRYINK 704

Query: 305 KAVEEFLKMYRTGF----MPKNLEFSVFYDKMRDEAI 403
              +EFLK+   GF    + K LE     D M + A+
Sbjct: 705 LGYKEFLKLPEMGFGTSLLQKRLEIETMTDNMSELAV 741


>12_01_1025 -
           10506144-10506226,10506643-10506699,10507502-10507605,
           10507884-10507937,10508107-10508193,10509027-10509214,
           10509793-10509854,10510084-10510354,10510756-10510834,
           10511715-10511913,10512816-10512960,10513324-10513416,
           10514449-10514736
          Length = 569

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +2

Query: 440 ETFYKSACFARVHLNQGQFLYAF 508
           ETF+ +AC  R HL QG+ + A+
Sbjct: 427 ETFFTTACMGRGHLCQGKLVDAY 449


>03_06_0690 - 35571816-35572586
          Length = 256

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -1

Query: 124 AERDGYKPSQNQDKTSWFPA 65
           A R G KP+Q + +T+W PA
Sbjct: 109 AHRRGQKPAQRRPRTAWIPA 128


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,654,311
Number of Sequences: 37544
Number of extensions: 438598
Number of successful extensions: 826
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 826
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)