Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_M17
(909 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5UAT5 Cluster: 60S ribosomal protein L6; n=15; Bilater... 244 3e-63
UniRef50_Q02878 Cluster: 60S ribosomal protein L6; n=71; Euteleo... 97 4e-19
UniRef50_Q9V9W3 Cluster: 60S ribosomal protein L6; n=6; Metazoa|... 97 7e-19
UniRef50_Q6B8B0 Cluster: 60S ribosomal protein L6; n=1; Ixodes p... 85 2e-15
UniRef50_A7S4S4 Cluster: Predicted protein; n=5; Eukaryota|Rep: ... 77 8e-13
UniRef50_A7L698 Cluster: 60S ribosomal protein L6; n=1; Artemia ... 70 9e-11
UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffith... 58 3e-07
UniRef50_Q5DE99 Cluster: 60S ribosomal protein L6; n=1; Schistos... 50 8e-05
UniRef50_A3F4R4 Cluster: 60S ribosomal protein L6; n=1; Taenia a... 42 0.029
UniRef50_UPI0000DC20AA Cluster: UPI0000DC20AA related cluster; n... 41 0.050
UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15; Pezizom... 41 0.050
UniRef50_Q4N3I8 Cluster: 60S ribosomal protein L6e, putative; n=... 40 0.066
UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11; Eukar... 38 0.27
UniRef50_Q5CM54 Cluster: 60S ribosomal protein L6; n=2; Cryptosp... 37 0.62
UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia... 35 2.5
UniRef50_P47991 Cluster: 60S ribosomal protein L6; n=2; Caenorha... 34 4.4
UniRef50_A7ET80 Cluster: Putative uncharacterized protein; n=1; ... 34 5.8
UniRef50_A2EBD1 Cluster: 60S ribosomal protein L6, putative; n=7... 33 7.6
>UniRef50_Q5UAT5 Cluster: 60S ribosomal protein L6; n=15;
Bilateria|Rep: 60S ribosomal protein L6 - Bombyx mori
(Silk moth)
Length = 273
Score = 244 bits (596), Expect = 3e-63
Identities = 129/181 (71%), Positives = 134/181 (74%), Gaps = 6/181 (3%)
Frame = +1
Query: 160 RNYDLGNGVMRFSKSKMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVPL 339
RNYDLGNGVMRFSKSKMFHKKAKYKFIG LTVVVKQIGGEKNGGTRTVPL
Sbjct: 30 RNYDLGNGVMRFSKSKMFHKKAKYKFIGKKNPKPEKPKKLTVVVKQIGGEKNGGTRTVPL 89
Query: 340 KRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGXHAXKKVVLVGILXSG 519
KRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAG HA K+VVLVGIL SG
Sbjct: 90 KRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSG 149
Query: 520 -----SAFSY-WXPLHSIRXRYXXXXXXXXXXXXXXIHSGNFQLAKHFNDDYFKXNXKCV 681
F++ PL I RY I GNF+L KHFNDDYFK N KCV
Sbjct: 150 LLLVTGPFAFNSCPLRRIPQRY-------VIGTSTRISLGNFKLPKHFNDDYFKKNKKCV 202
Query: 682 Q 684
+
Sbjct: 203 K 203
>UniRef50_Q02878 Cluster: 60S ribosomal protein L6; n=71;
Euteleostomi|Rep: 60S ribosomal protein L6 - Homo
sapiens (Human)
Length = 288
Score = 97.5 bits (232), Expect = 4e-19
Identities = 61/174 (35%), Positives = 85/174 (48%), Gaps = 6/174 (3%)
Frame = +1
Query: 160 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 327
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 328 TVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGXHAXKKVVLV 501
V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L G H K+VV +
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 502 GILXSGSAFSYWXPLHSIRXRYXXXXXXXXXXXXXXIHSGNFQLAKHFNDDYFK 663
L SG PL R I N ++ KH D YFK
Sbjct: 166 KQLASG-LLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYFK 218
>UniRef50_Q9V9W3 Cluster: 60S ribosomal protein L6; n=6;
Metazoa|Rep: 60S ribosomal protein L6 - Drosophila
melanogaster (Fruit fly)
Length = 262
Score = 96.7 bits (230), Expect = 7e-19
Identities = 62/173 (35%), Positives = 88/173 (50%), Gaps = 6/173 (3%)
Frame = +1
Query: 163 NYDLGNGVMRFSKSKMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVPLK 342
N L G++R+SK++M+ ++A Y+ VK+IGG KNGG RTV LK
Sbjct: 23 NSYLKGGILRYSKAQMYKRRALYRLKDKKSPVVEKAKVPIKKVKKIGGPKNGGERTVFLK 82
Query: 343 RRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGXHAXKKVVLVGILXSG- 519
+ K+ YPT+ ++ FS+H R R NL GTV ILLAG H K+VVL+ +L SG
Sbjct: 83 KSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQGKRVVLLKVLASGL 142
Query: 520 ----SAFSY-WXPLHSIRXRYXXXXXXXXXXXXXXIHSGNFQLAKHFNDDYFK 663
F+ PL + RY + G F++ +H ND YF+
Sbjct: 143 LLVTGPFALNSCPLRRVSQRY-------VIGTSSKVDLGAFKVPEHLNDAYFR 188
>UniRef50_Q6B8B0 Cluster: 60S ribosomal protein L6; n=1; Ixodes
pacificus|Rep: 60S ribosomal protein L6 - Ixodes
pacificus (western blacklegged tick)
Length = 268
Score = 85.0 bits (201), Expect = 2e-15
Identities = 47/122 (38%), Positives = 69/122 (56%), Gaps = 2/122 (1%)
Frame = +1
Query: 160 RNYDLGNGVMRFSKSKMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVPL 339
+N+ L GV FS+SKMFHK+ +K V VK++ GEKNGG R +PL
Sbjct: 26 KNHKLPGGVWLFSRSKMFHKRGLFKVKHAAPTKEKRKRKKRVTVKRVKGEKNGGKRVLPL 85
Query: 340 KRRKSFYPTQE--KIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGXHAXKKVVLVGILX 513
K+ + YPT++ + + +S +P S+ +R + GTV ILLAG H K+VV + L
Sbjct: 86 KKERRSYPTEDSPQHKRTSHMKPSSRTRVALRKRITPGTVLILLAGPHRGKRVVFLKQLK 145
Query: 514 SG 519
+G
Sbjct: 146 TG 147
>UniRef50_A7S4S4 Cluster: Predicted protein; n=5; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 244
Score = 76.6 bits (180), Expect = 8e-13
Identities = 46/120 (38%), Positives = 65/120 (54%)
Frame = +1
Query: 160 RNYDLGNGVMRFSKSKMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVPL 339
RN +L G+ R+S+S ++ K+A YK T K IGG+KNGG R VP+
Sbjct: 11 RNPELAPGISRYSRSAIYKKRALYKRKKTGVKKVVQDEPRTKT-KDIGGDKNGGKRVVPV 69
Query: 340 KRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGXHAXKKVVLVGILXSG 519
+R +YPT E +R R + ++R ++ GTV ILLAG H K+VV + L SG
Sbjct: 70 QRESRYYPT-EDVRRRLANRK-KPGMAKLRSSITPGTVLILLAGAHRGKRVVFLKQLNSG 127
>UniRef50_A7L698 Cluster: 60S ribosomal protein L6; n=1; Artemia
franciscana|Rep: 60S ribosomal protein L6 - Artemia
sanfranciscana (Brine shrimp) (Artemia franciscana)
Length = 241
Score = 69.7 bits (163), Expect = 9e-11
Identities = 43/127 (33%), Positives = 63/127 (49%)
Frame = +1
Query: 283 VVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCIL 462
V+ K+IGG+KNGGTR V ++ FYP + + +K+ +IR +L+ GT+ IL
Sbjct: 44 VIEKKIGGDKNGGTRLVSTRKPPQFYPINSRQKRFHRRLVNNKNPPKIRKSLQPGTILIL 103
Query: 463 LAGXHAXKKVVLVGILXSGSAFSYWXPLHSIRXRYXXXXXXXXXXXXXXIHSGNFQLAKH 642
LAG + K+VVL+ L SG PL R I N ++ +H
Sbjct: 104 LAGVNRGKRVVLLKALKSG-LLLVSGPLKVNRVPLRRVHQKLVIATSTRIDISNVKVPEH 162
Query: 643 FNDDYFK 663
ND YF+
Sbjct: 163 INDTYFR 169
>UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffithsia
japonica|Rep: 60S ribosomal protein L6 - Griffithsia
japonica (Red alga)
Length = 216
Score = 58.0 bits (134), Expect = 3e-07
Identities = 31/81 (38%), Positives = 46/81 (56%)
Frame = +1
Query: 277 LTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVC 456
+ ++ K IGG KNGG R VP K+ +YP +K + R ++RP++K GT+
Sbjct: 20 IKMIKKPIGGAKNGGYRLVPEKKGPKWYPADDK-KTPVPSRKNVHKPTKLRPSIKSGTIV 78
Query: 457 ILLAGXHAXKKVVLVGILXSG 519
ILLAG +VV++ L SG
Sbjct: 79 ILLAGVFRGSRVVVLKQLDSG 99
>UniRef50_Q5DE99 Cluster: 60S ribosomal protein L6; n=1; Schistosoma
japonicum|Rep: 60S ribosomal protein L6 - Schistosoma
japonicum (Blood fluke)
Length = 238
Score = 50.0 bits (114), Expect = 8e-05
Identities = 40/119 (33%), Positives = 55/119 (46%), Gaps = 9/119 (7%)
Frame = +1
Query: 334 PLKRRKSFYPTQE---KIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGXHAXKKVVLVG 504
P R Y TQ+ K+R + FS HVR+IR +++ GTV ILLAG H K+V+ +
Sbjct: 55 PKTRFPRSYVTQQGKRKLRLRRA-KCFSNHVRKIRSSIQPGTVLILLAGPHKGKRVIFLK 113
Query: 505 ILXSG-----SAFSY-WXPLHSIRXRYXXXXXXXXXXXXXXIHSGNFQLAKHFNDDYFK 663
L SG F Y PL + Y I F + KH +D+YF+
Sbjct: 114 ALKSGLLLVTGPFKYNGVPLRRVNQCY-------VIATSTRIDISKFDVPKHIDDEYFR 165
>UniRef50_A3F4R4 Cluster: 60S ribosomal protein L6; n=1; Taenia
asiatica|Rep: 60S ribosomal protein L6 - Taenia asiatica
(Asian tapeworm)
Length = 212
Score = 41.5 bits (93), Expect = 0.029
Identities = 31/93 (33%), Positives = 42/93 (45%), Gaps = 6/93 (6%)
Frame = +1
Query: 403 FSKHVRRIRPNLKIGTVCILLAGXHAXKKVVLVGILXSG-----SAFSY-WXPLHSIRXR 564
F+ H RRIR ++ G V ILLAG H K+VV + L SG F Y PL + R
Sbjct: 86 FADHRRRIRKSITPGKVLILLAGRHRAKRVVFLKSLASGLLLVTGPFKYNGVPLRRVNQR 145
Query: 565 YXXXXXXXXXXXXXXIHSGNFQLAKHFNDDYFK 663
Y I N ++ ND++F+
Sbjct: 146 Y-------VIATKTRIKIKNIKIPSQLNDEFFR 171
>UniRef50_UPI0000DC20AA Cluster: UPI0000DC20AA related cluster; n=2;
Rattus norvegicus|Rep: UPI0000DC20AA UniRef100 entry -
Rattus norvegicus
Length = 261
Score = 40.7 bits (91), Expect = 0.050
Identities = 33/120 (27%), Positives = 55/120 (45%)
Frame = +1
Query: 160 RNYDLGNGVMRFSKSKMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVPL 339
RN L G R+S ++ +K Y + + V+K + G+KNGGT V L
Sbjct: 49 RNPILVRGTGRYSIKALYERK--YSAVKSKCEKKKKEKVVATVIKTVSGDKNGGTGVVKL 106
Query: 340 KRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGXHAXKKVVLVGILXSG 519
++ K + + + + S P KH + + N TV I++ G H ++VV + L G
Sbjct: 107 QKMKMYLGSCKAMAKS----PAFKHEKAV-CNSTPETVLIIITGQH--RRVVFLKQLSRG 159
>UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15;
Pezizomycotina|Rep: 60S ribosomal protein L6 -
Coccidioides immitis
Length = 206
Score = 40.7 bits (91), Expect = 0.050
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Frame = +1
Query: 280 TVVVKQIGGEKN--GGTRTVPLKRRKS--FYPTQEKIRASSGGRPFSKHVRRIRPNLKIG 447
T+ K +G K G R +P +K+ +YP ++ + + + H ++RP+L+ G
Sbjct: 4 TLDSKSVGQTKKFGKGERVIPHPSQKAQKWYPADDEPQPKKARK--TAHPTKLRPSLQPG 61
Query: 448 TVCILLAGXHAXKKVVLVGILXSG 519
T+ ILLAG K+V+L+ L G
Sbjct: 62 TILILLAGRFRGKRVILLKHLGQG 85
>UniRef50_Q4N3I8 Cluster: 60S ribosomal protein L6e, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L6e, putative -
Theileria parva
Length = 212
Score = 40.3 bits (90), Expect = 0.066
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Frame = +1
Query: 331 VPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGXHAXKKVVLVGIL 510
V L RRK+ K + GR ++ V ++R +LK G V ILL G + K+VVL+ +L
Sbjct: 12 VKLNRRKTVVTRLGKTKVV--GRKYAS-VPKVRESLKPGAVLILLTGSYKGKRVVLLKVL 68
Query: 511 XSG-----SAFSY-WXPLHSIRXRY 567
SG FS+ PL + RY
Sbjct: 69 KSGLLLVTGPFSFNGVPLRRVNSRY 93
>UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11;
Eukaryota|Rep: 60S ribosomal protein L6-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 233
Score = 38.3 bits (85), Expect = 0.27
Identities = 32/120 (26%), Positives = 55/120 (45%)
Frame = +1
Query: 160 RNYDLGNGVMRFSKSKMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVPL 339
RN DL GV ++S+S+M+HK+ + + V P+
Sbjct: 12 RNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKV-------------DAPV 58
Query: 340 KRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGXHAXKKVVLVGILXSG 519
++ FYP ++ ++ R +K + +R ++ GTV I+LAG K+VV + L SG
Sbjct: 59 EKPPKFYPAED-VKKPLPNRRTAKPAK-LRASITPGTVLIILAGRFKGKRVVFLKQLASG 116
>UniRef50_Q5CM54 Cluster: 60S ribosomal protein L6; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L6 -
Cryptosporidium hominis
Length = 184
Score = 37.1 bits (82), Expect = 0.62
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = +1
Query: 379 RASSGGRPFSKHVRRIRPNLKIGTVCILLAGXHAXKKVVLVGILXSG 519
R S R S ++R +L+ G VCILLAG + K+VV++ L SG
Sbjct: 20 RKYSSRRKASVVAPKLRSSLQPGVVCILLAGPYKGKRVVMLKALPSG 66
>UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia
lamblia ATCC 50803|Rep: 60S ribosomal protein L27 -
Giardia lamblia ATCC 50803
Length = 135
Score = 35.1 bits (77), Expect = 2.5
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = +1
Query: 427 RPNLKIGTVCILLAGXHAXKKVVLVGILXSGSAFSY 534
+P +K G VCI+L G HA KK V+V L SY
Sbjct: 3 QPIIKPGLVCIVLQGRHAGKKAVIVEALPHNERGSY 38
>UniRef50_P47991 Cluster: 60S ribosomal protein L6; n=2;
Caenorhabditis|Rep: 60S ribosomal protein L6 -
Caenorhabditis elegans
Length = 217
Score = 34.3 bits (75), Expect = 4.4
Identities = 24/89 (26%), Positives = 35/89 (39%), Gaps = 1/89 (1%)
Frame = +1
Query: 424 IRPNLKIGTVCILLAGXHAXKKVVLVGILXSGSAFSYWXPLHSIR-XRYXXXXXXXXXXX 600
+R L GTV I+LAG H K+VV + L P H I
Sbjct: 67 LRKTLTPGTVLIVLAGRHKGKRVVFLKQLPQSGLLLVTGP-HKINGFPLRRIGQAFVIAT 125
Query: 601 XXXIHSGNFQLAKHFNDDYFKXNXKCVQT 687
++ ++ +H ND+YFK +T
Sbjct: 126 SLKVNVSGVKIPEHINDEYFKRKSTAQKT 154
>UniRef50_A7ET80 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 752
Score = 33.9 bits (74), Expect = 5.8
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = +1
Query: 310 KNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLK 441
K R LK SF P + + ASS GRP K +R+R LK
Sbjct: 128 KEDHNREEELKAMVSFMPHRPAVDASSSGRPMKKDSKRMRNGLK 171
>UniRef50_A2EBD1 Cluster: 60S ribosomal protein L6, putative; n=7;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L6,
putative - Trichomonas vaginalis G3
Length = 151
Score = 33.5 bits (73), Expect = 7.6
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +1
Query: 427 RPNLKIGTVCILLAGXHAXKKVVLVGILXSG 519
RP+LK+GTV I++ G H K+ V+V +G
Sbjct: 53 RPSLKVGTVVIVVGGEHQGKRAVVVADQGAG 83
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 778,291,939
Number of Sequences: 1657284
Number of extensions: 13667806
Number of successful extensions: 25704
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 24971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25678
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 82801539422
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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