Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_M17
(909 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6 pr... 98 4e-20
D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein TAXRE... 97 6e-20
BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6 pr... 97 6e-20
BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6 pr... 97 6e-20
BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6 pr... 97 6e-20
BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6 pr... 97 6e-20
BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6 pr... 97 6e-20
BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6 pr... 97 6e-20
BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6 pr... 97 6e-20
AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6 pr... 97 6e-20
S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140 pro... 90 9e-18
AF261087-1|AAF99680.1| 289|Homo sapiens DNA-binding protein TAX... 89 2e-17
X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6 prot... 86 2e-16
>BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 97.9 bits (233), Expect = 4e-20
Identities = 62/174 (35%), Positives = 85/174 (48%), Gaps = 6/174 (3%)
Frame = +1
Query: 160 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 327
RN L GV R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGVGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 328 TVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGXHAXKKVVLV 501
V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L G H K+VV +
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 502 GILXSGSAFSYWXPLHSIRXRYXXXXXXXXXXXXXXIHSGNFQLAKHFNDDYFK 663
L SG PL R I N ++ KH D YFK
Sbjct: 166 KQLASG-LLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYFK 218
>D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein
TAXREB107 protein.
Length = 288
Score = 97.5 bits (232), Expect = 6e-20
Identities = 61/174 (35%), Positives = 85/174 (48%), Gaps = 6/174 (3%)
Frame = +1
Query: 160 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 327
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 328 TVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGXHAXKKVVLV 501
V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L G H K+VV +
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 502 GILXSGSAFSYWXPLHSIRXRYXXXXXXXXXXXXXXIHSGNFQLAKHFNDDYFK 663
L SG PL R I N ++ KH D YFK
Sbjct: 166 KQLASG-LLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYFK 218
>BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 97.5 bits (232), Expect = 6e-20
Identities = 61/174 (35%), Positives = 85/174 (48%), Gaps = 6/174 (3%)
Frame = +1
Query: 160 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 327
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 328 TVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGXHAXKKVVLV 501
V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L G H K+VV +
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 502 GILXSGSAFSYWXPLHSIRXRYXXXXXXXXXXXXXXIHSGNFQLAKHFNDDYFK 663
L SG PL R I N ++ KH D YFK
Sbjct: 166 KQLASG-LLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYFK 218
>BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 97.5 bits (232), Expect = 6e-20
Identities = 61/174 (35%), Positives = 85/174 (48%), Gaps = 6/174 (3%)
Frame = +1
Query: 160 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 327
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 328 TVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGXHAXKKVVLV 501
V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L G H K+VV +
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 502 GILXSGSAFSYWXPLHSIRXRYXXXXXXXXXXXXXXIHSGNFQLAKHFNDDYFK 663
L SG PL R I N ++ KH D YFK
Sbjct: 166 KQLASG-LLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYFK 218
>BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 97.5 bits (232), Expect = 6e-20
Identities = 61/174 (35%), Positives = 85/174 (48%), Gaps = 6/174 (3%)
Frame = +1
Query: 160 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 327
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 328 TVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGXHAXKKVVLV 501
V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L G H K+VV +
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 502 GILXSGSAFSYWXPLHSIRXRYXXXXXXXXXXXXXXIHSGNFQLAKHFNDDYFK 663
L SG PL R I N ++ KH D YFK
Sbjct: 166 KQLASG-LLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYFK 218
>BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 97.5 bits (232), Expect = 6e-20
Identities = 61/174 (35%), Positives = 85/174 (48%), Gaps = 6/174 (3%)
Frame = +1
Query: 160 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 327
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 328 TVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGXHAXKKVVLV 501
V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L G H K+VV +
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 502 GILXSGSAFSYWXPLHSIRXRYXXXXXXXXXXXXXXIHSGNFQLAKHFNDDYFK 663
L SG PL R I N ++ KH D YFK
Sbjct: 166 KQLASG-LLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYFK 218
>BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 97.5 bits (232), Expect = 6e-20
Identities = 61/174 (35%), Positives = 85/174 (48%), Gaps = 6/174 (3%)
Frame = +1
Query: 160 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 327
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 328 TVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGXHAXKKVVLV 501
V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L G H K+VV +
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 502 GILXSGSAFSYWXPLHSIRXRYXXXXXXXXXXXXXXIHSGNFQLAKHFNDDYFK 663
L SG PL R I N ++ KH D YFK
Sbjct: 166 KQLASG-LLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYFK 218
>BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 97.5 bits (232), Expect = 6e-20
Identities = 61/174 (35%), Positives = 85/174 (48%), Gaps = 6/174 (3%)
Frame = +1
Query: 160 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 327
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 328 TVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGXHAXKKVVLV 501
V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L G H K+VV +
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 502 GILXSGSAFSYWXPLHSIRXRYXXXXXXXXXXXXXXIHSGNFQLAKHFNDDYFK 663
L SG PL R I N ++ KH D YFK
Sbjct: 166 KQLASG-LLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYFK 218
>BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 97.5 bits (232), Expect = 6e-20
Identities = 61/174 (35%), Positives = 85/174 (48%), Gaps = 6/174 (3%)
Frame = +1
Query: 160 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 327
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 328 TVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGXHAXKKVVLV 501
V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L G H K+VV +
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 502 GILXSGSAFSYWXPLHSIRXRYXXXXXXXXXXXXXXIHSGNFQLAKHFNDDYFK 663
L SG PL R I N ++ KH D YFK
Sbjct: 166 KQLASG-LLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYFK 218
>AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 97.5 bits (232), Expect = 6e-20
Identities = 61/174 (35%), Positives = 85/174 (48%), Gaps = 6/174 (3%)
Frame = +1
Query: 160 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 327
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 328 TVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGXHAXKKVVLV 501
V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L G H K+VV +
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFL 165
Query: 502 GILXSGSAFSYWXPLHSIRXRYXXXXXXXXXXXXXXIHSGNFQLAKHFNDDYFK 663
L SG PL R I N ++ KH D YFK
Sbjct: 166 KQLASG-LLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYFK 218
>S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140
product protein.
Length = 207
Score = 90.2 bits (214), Expect = 9e-18
Identities = 55/159 (34%), Positives = 77/159 (48%), Gaps = 2/159 (1%)
Frame = +1
Query: 193 FSKSKMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQE 372
+S+ M+ K KY L V K +GG+KNGGTR V L++ +YPT++
Sbjct: 2 YSRKAMY--KRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTRVVKLRKMPRYYPTED 59
Query: 373 KIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGXHAXKKVVLVGILXSGSAFSYWXPL 546
R S G +PFS+HVR++R ++ GT+ I+L G H K+VV + L SG PL
Sbjct: 60 VPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASG-LLLVTGPL 118
Query: 547 HSIRXRYXXXXXXXXXXXXXXIHSGNFQLAKHFNDDYFK 663
SI Y S ++ KH D YFK
Sbjct: 119 VSIEFLYEEHTRNLSLPLQPKSISAIVKIPKHLTDAYFK 157
>AF261087-1|AAF99680.1| 289|Homo sapiens DNA-binding protein
TAXREB107 protein.
Length = 289
Score = 89.0 bits (211), Expect = 2e-17
Identities = 60/175 (34%), Positives = 83/175 (47%), Gaps = 7/175 (4%)
Frame = +1
Query: 160 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 327
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 328 TVPLKRRKSFYPTQEKIR--ASSGGRPFSKHVRRIRPNLKIGTVCILLAGXHAXKK-VVL 498
V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L G K VV
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRRRGKNWVVF 165
Query: 499 VGILXSGSAFSYWXPLHSIRXRYXXXXXXXXXXXXXXIHSGNFQLAKHFNDDYFK 663
+ L SG PL R I N ++ KH D YFK
Sbjct: 166 LKQLASG-LLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYFK 219
>X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 85.8 bits (203), Expect = 2e-16
Identities = 54/164 (32%), Positives = 76/164 (46%), Gaps = 4/164 (2%)
Frame = +1
Query: 184 VMRFSKSKMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVPLKRRKSFYP 363
+ S+ M+ K KY L V K +GG+KNGGTR V L++ +YP
Sbjct: 60 ICHVSRKAMY--KRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTRVVKLRKMPRYYP 117
Query: 364 TQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGXHAXKKVVLVGILXSGSAF--S 531
T++ R S G +PFS+HVR++R ++ GT+ I+L G H K+VV + L SG
Sbjct: 118 TEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASGLLLVTD 177
Query: 532 YWXPLHSIRXRYXXXXXXXXXXXXXXIHSGNFQLAKHFNDDYFK 663
W SI I N ++ KH D YFK
Sbjct: 178 LW---SSIEVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYFK 218
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,699,176
Number of Sequences: 237096
Number of extensions: 2251520
Number of successful extensions: 3601
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3565
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11770329464
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -