Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_M17
         (909 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070994-1|AAL48616.1|  262|Drosophila melanogaster RE08669p pro...    97   4e-20
AE014297-4764|AAF57167.1|  262|Drosophila melanogaster CG11522-P...    97   4e-20
AE014297-4763|AAF57166.1|  243|Drosophila melanogaster CG11522-P...    65   1e-10

>AY070994-1|AAL48616.1|  262|Drosophila melanogaster RE08669p
           protein.
          Length = 262

 Score = 96.7 bits (230), Expect = 4e-20
 Identities = 62/173 (35%), Positives = 88/173 (50%), Gaps = 6/173 (3%)
 Frame = +1

Query: 163 NYDLGNGVMRFSKSKMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVPLK 342
           N  L  G++R+SK++M+ ++A Y+                  VK+IGG KNGG RTV LK
Sbjct: 23  NSYLKGGILRYSKAQMYKRRALYRLKDKKSPVVEKAKVPIKKVKKIGGPKNGGERTVFLK 82

Query: 343 RRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGXHAXKKVVLVGILXSG- 519
           + K+ YPT+  ++       FS+H R  R NL  GTV ILLAG H  K+VVL+ +L SG 
Sbjct: 83  KSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQGKRVVLLKVLASGL 142

Query: 520 ----SAFSY-WXPLHSIRXRYXXXXXXXXXXXXXXIHSGNFQLAKHFNDDYFK 663
                 F+    PL  +  RY              +  G F++ +H ND YF+
Sbjct: 143 LLVTGPFALNSCPLRRVSQRY-------VIGTSSKVDLGAFKVPEHLNDAYFR 188


>AE014297-4764|AAF57167.1|  262|Drosophila melanogaster CG11522-PB,
           isoform B protein.
          Length = 262

 Score = 96.7 bits (230), Expect = 4e-20
 Identities = 62/173 (35%), Positives = 88/173 (50%), Gaps = 6/173 (3%)
 Frame = +1

Query: 163 NYDLGNGVMRFSKSKMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVPLK 342
           N  L  G++R+SK++M+ ++A Y+                  VK+IGG KNGG RTV LK
Sbjct: 23  NSYLKGGILRYSKAQMYKRRALYRLKDKKSPVVEKAKVPIKKVKKIGGPKNGGERTVFLK 82

Query: 343 RRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGXHAXKKVVLVGILXSG- 519
           + K+ YPT+  ++       FS+H R  R NL  GTV ILLAG H  K+VVL+ +L SG 
Sbjct: 83  KSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQGKRVVLLKVLASGL 142

Query: 520 ----SAFSY-WXPLHSIRXRYXXXXXXXXXXXXXXIHSGNFQLAKHFNDDYFK 663
                 F+    PL  +  RY              +  G F++ +H ND YF+
Sbjct: 143 LLVTGPFALNSCPLRRVSQRY-------VIGTSSKVDLGAFKVPEHLNDAYFR 188


>AE014297-4763|AAF57166.1|  243|Drosophila melanogaster CG11522-PA,
           isoform A protein.
          Length = 243

 Score = 64.9 bits (151), Expect = 1e-10
 Identities = 53/173 (30%), Positives = 82/173 (47%), Gaps = 6/173 (3%)
 Frame = +1

Query: 163 NYDLGNGVMRFSKSKMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVPLK 342
           N  L  G++R+SK++M+ ++A Y+               + VV++           VP+K
Sbjct: 23  NSYLKGGILRYSKAQMYKRRALYRL----------KDKKSPVVEKA---------KVPIK 63

Query: 343 RRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGXHAXKKVVLVGILXSG- 519
           + K+ YPT+  ++       FS+H R  R NL  GTV ILLAG H  K+VVL+ +L SG 
Sbjct: 64  KSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQGKRVVLLKVLASGL 123

Query: 520 ----SAFSY-WXPLHSIRXRYXXXXXXXXXXXXXXIHSGNFQLAKHFNDDYFK 663
                 F+    PL  +  RY              +  G F++ +H ND YF+
Sbjct: 124 LLVTGPFALNSCPLRRVSQRY-------VIGTSSKVDLGAFKVPEHLNDAYFR 169


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,581,121
Number of Sequences: 53049
Number of extensions: 670522
Number of successful extensions: 1241
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1232
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4443987051
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)