Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_M16
(870 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8SYY6 Cluster: RE27904p; n=8; Coelomata|Rep: RE27904p ... 66 1e-09
UniRef50_Q8MXH3 Cluster: Putative uncharacterized protein T09A12... 52 3e-05
UniRef50_Q7ZUJ1 Cluster: Zgc:56419; n=5; Euteleostomi|Rep: Zgc:5... 48 3e-04
UniRef50_Q9Y6X1 Cluster: Ribosome-attached membrane protein 4; n... 47 5e-04
UniRef50_UPI0000D9E6A9 Cluster: PREDICTED: similar to ribosome a... 41 0.047
UniRef50_Q238X7 Cluster: Ribosome associated membrane protein RA... 41 0.047
UniRef50_UPI0000E1FFEC Cluster: PREDICTED: similar to ribosome a... 40 0.062
UniRef50_A7QP46 Cluster: Chromosome chr1 scaffold_136, whole gen... 37 0.77
UniRef50_Q0IRG8 Cluster: Os11g0637400 protein; n=11; Liliopsida|... 36 1.0
UniRef50_A3CD52 Cluster: Putative uncharacterized protein; n=2; ... 36 1.0
UniRef50_A0D197 Cluster: Chromosome undetermined scaffold_34, wh... 35 2.3
UniRef50_Q5BTC1 Cluster: SJCHGC02042 protein; n=1; Schistosoma j... 33 7.1
UniRef50_Q9FZK2 Cluster: F17L21.12; n=13; Magnoliophyta|Rep: F17... 33 9.4
>UniRef50_Q8SYY6 Cluster: RE27904p; n=8; Coelomata|Rep: RE27904p -
Drosophila melanogaster (Fruit fly)
Length = 64
Score = 65.7 bits (153), Expect = 1e-09
Identities = 28/38 (73%), Positives = 32/38 (84%)
Frame = +3
Query: 150 PKQRMRIANEIASKNITMRGNVPKTTKEKEEQYPVAPW 263
P QRMR+ANE ASK +TMRGNVPK++K KE QYPV PW
Sbjct: 3 PPQRMRVANEKASKYVTMRGNVPKSSKTKEGQYPVGPW 40
Score = 39.9 bits (89), Expect = 0.082
Identities = 17/19 (89%), Positives = 19/19 (100%)
Frame = +2
Query: 269 LALFIFVVCGSAVFQIIQS 325
LALFIFVVCGSA+FQI+QS
Sbjct: 42 LALFIFVVCGSAIFQIVQS 60
>UniRef50_Q8MXH3 Cluster: Putative uncharacterized protein T09A12.5;
n=2; Bilateria|Rep: Putative uncharacterized protein
T09A12.5 - Caenorhabditis elegans
Length = 63
Score = 51.6 bits (118), Expect = 3e-05
Identities = 21/38 (55%), Positives = 26/38 (68%)
Frame = +3
Query: 150 PKQRMRIANEIASKNITMRGNVPKTTKEKEEQYPVAPW 263
PKQRM +AN SKN+T RGNVPK K E ++P + W
Sbjct: 3 PKQRMAVANAQFSKNVTQRGNVPKGNKTNESKFPTSQW 40
Score = 33.1 bits (72), Expect = 9.4
Identities = 12/18 (66%), Positives = 17/18 (94%)
Frame = +2
Query: 269 LALFIFVVCGSAVFQIIQ 322
+ LFIFVVCGSA+F++I+
Sbjct: 42 IGLFIFVVCGSAIFEVIR 59
>UniRef50_Q7ZUJ1 Cluster: Zgc:56419; n=5; Euteleostomi|Rep:
Zgc:56419 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 66
Score = 48.0 bits (109), Expect = 3e-04
Identities = 23/38 (60%), Positives = 30/38 (78%), Gaps = 1/38 (2%)
Frame = +3
Query: 153 KQRMRIANEIASKNITMRGNVPKTTK-EKEEQYPVAPW 263
KQR+R+ANE SKNIT+RGNV K+T+ +EE+ V PW
Sbjct: 4 KQRIRMANEKHSKNITLRGNVAKSTRGTQEEKAVVGPW 41
Score = 39.9 bits (89), Expect = 0.082
Identities = 17/19 (89%), Positives = 19/19 (100%)
Frame = +2
Query: 269 LALFIFVVCGSAVFQIIQS 325
LALF+FVVCGSA+FQIIQS
Sbjct: 43 LALFVFVVCGSAIFQIIQS 61
>UniRef50_Q9Y6X1 Cluster: Ribosome-attached membrane protein 4;
n=33; Eumetazoa|Rep: Ribosome-attached membrane protein
4 - Homo sapiens (Human)
Length = 66
Score = 47.2 bits (107), Expect = 5e-04
Identities = 23/38 (60%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Frame = +3
Query: 153 KQRMRIANEIASKNITMRGNVPKTTKE-KEEQYPVAPW 263
KQR+R+ANE SKNIT RGNV KT++ EE+ V PW
Sbjct: 4 KQRIRMANEKHSKNITQRGNVAKTSRNAPEEKASVGPW 41
Score = 40.3 bits (90), Expect = 0.062
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +2
Query: 269 LALFIFVVCGSAVFQIIQS 325
LALFIFVVCGSA+FQIIQS
Sbjct: 43 LALFIFVVCGSAIFQIIQS 61
>UniRef50_UPI0000D9E6A9 Cluster: PREDICTED: similar to ribosome
associated membrane protein 4; n=1; Macaca mulatta|Rep:
PREDICTED: similar to ribosome associated membrane
protein 4 - Macaca mulatta
Length = 177
Score = 40.7 bits (91), Expect = 0.047
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = +3
Query: 153 KQRMRIANEIASKNITMRGNVPKTTKE 233
KQR+R+ANE SKNIT RGNV KT K+
Sbjct: 4 KQRIRMANEKHSKNITQRGNVAKTLKK 30
>UniRef50_Q238X7 Cluster: Ribosome associated membrane protein RAMP4
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Ribosome associated membrane protein RAMP4
containing protein - Tetrahymena thermophila SB210
Length = 107
Score = 40.7 bits (91), Expect = 0.047
Identities = 17/37 (45%), Positives = 26/37 (70%)
Frame = +3
Query: 153 KQRMRIANEIASKNITMRGNVPKTTKEKEEQYPVAPW 263
KQ+M++ + + +KN+T RG VP + K KEE+ V PW
Sbjct: 48 KQQMKLKSNLHNKNVTNRGKVPSSLKSKEEK-SVGPW 83
>UniRef50_UPI0000E1FFEC Cluster: PREDICTED: similar to ribosome
attached membrane protein 4; n=1; Pan troglodytes|Rep:
PREDICTED: similar to ribosome attached membrane protein
4 - Pan troglodytes
Length = 231
Score = 40.3 bits (90), Expect = 0.062
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +2
Query: 269 LALFIFVVCGSAVFQIIQS 325
LALFIFVVCGSA+FQIIQS
Sbjct: 208 LALFIFVVCGSAIFQIIQS 226
>UniRef50_A7QP46 Cluster: Chromosome chr1 scaffold_136, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr1 scaffold_136, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 105
Score = 36.7 bits (81), Expect = 0.77
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +3
Query: 189 KNITMRGNVPKTTKEKEEQYPVAP 260
KNIT RG+VP+TT +K YPV P
Sbjct: 54 KNITKRGSVPETTTKKGSDYPVGP 77
>UniRef50_Q0IRG8 Cluster: Os11g0637400 protein; n=11;
Liliopsida|Rep: Os11g0637400 protein - Oryza sativa
subsp. japonica (Rice)
Length = 573
Score = 36.3 bits (80), Expect = 1.0
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +3
Query: 189 KNITMRGNVPKTTKEKEEQYPVAP 260
KNIT RG+VP+TT +K YPV P
Sbjct: 27 KNITKRGSVPETTVKKGNDYPVGP 50
>UniRef50_A3CD52 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 460
Score = 36.3 bits (80), Expect = 1.0
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +3
Query: 189 KNITMRGNVPKTTKEKEEQYPVAP 260
KNIT RG+VP+TT +K YPV P
Sbjct: 17 KNITKRGSVPETTVKKGNDYPVGP 40
>UniRef50_A0D197 Cluster: Chromosome undetermined scaffold_34, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_34,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 75
Score = 35.1 bits (77), Expect = 2.3
Identities = 15/46 (32%), Positives = 28/46 (60%)
Frame = +3
Query: 123 ILYNKTKWPPKQRMRIANEIASKNITMRGNVPKTTKEKEEQYPVAP 260
++Y++ + P Q M++ ++ N+ +G VPK+ +KEE PV P
Sbjct: 3 LIYSRLQ-PSAQTMKLRSQNYQGNVNKQGKVPKSLIKKEENLPVGP 47
>UniRef50_Q5BTC1 Cluster: SJCHGC02042 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC02042 protein - Schistosoma
japonicum (Blood fluke)
Length = 79
Score = 33.5 bits (73), Expect = 7.1
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 156 QRMRIANEIASKNITMRGNVPKTTKEKEEQ 245
QRM++ N A N+ RGNVPK+ K + Q
Sbjct: 19 QRMKVQNGKAHGNVVNRGNVPKSLKSSDSQ 48
Score = 33.5 bits (73), Expect = 7.1
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +2
Query: 269 LALFIFVVCGSAVFQIIQ 322
L L +FVVCGSAVF+IIQ
Sbjct: 56 LGLIVFVVCGSAVFEIIQ 73
>UniRef50_Q9FZK2 Cluster: F17L21.12; n=13; Magnoliophyta|Rep:
F17L21.12 - Arabidopsis thaliana (Mouse-ear cress)
Length = 77
Score = 33.1 bits (72), Expect = 9.4
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +3
Query: 189 KNITMRGNVPKTTKEKEEQYPVAP 260
KNI RG VP+TT +K + YPV P
Sbjct: 26 KNILKRGFVPETTTKKGKDYPVGP 49
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 775,186,740
Number of Sequences: 1657284
Number of extensions: 14808527
Number of successful extensions: 29231
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 28328
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29226
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 77472727479
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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