Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_M16
         (870 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81095-2|CAB03157.1|   65|Caenorhabditis elegans Hypothetical pr...    53   2e-07
AF047660-4|AAM54169.1|   63|Caenorhabditis elegans Hypothetical ...    52   7e-07
Z83125-5|CAB05622.2|  362|Caenorhabditis elegans Hypothetical pr...    32   0.61 
AC006794-5|AAK68502.1|  821|Caenorhabditis elegans Hypothetical ...    31   1.4  
Z81130-7|CAE17967.1|  199|Caenorhabditis elegans Hypothetical pr...    29   4.3  
Z81492-3|CAB04030.1|  382|Caenorhabditis elegans Hypothetical pr...    28   10.0 

>Z81095-2|CAB03157.1|   65|Caenorhabditis elegans Hypothetical
           protein F59F4.2 protein.
          Length = 65

 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 22/38 (57%), Positives = 28/38 (73%)
 Frame = +3

Query: 150 PKQRMRIANEIASKNITMRGNVPKTTKEKEEQYPVAPW 263
           PKQRM +AN+  SKN+  RGNV K+ K  E++YP APW
Sbjct: 3   PKQRMTLANKQFSKNVNNRGNVAKSLKPAEDKYPAAPW 40



 Score = 33.5 bits (73), Expect = 0.20
 Identities = 13/18 (72%), Positives = 17/18 (94%)
 Frame = +2

Query: 269 LALFIFVVCGSAVFQIIQ 322
           + LF+FVVCGSAVF+II+
Sbjct: 42  IGLFVFVVCGSAVFEIIR 59


>AF047660-4|AAM54169.1|   63|Caenorhabditis elegans Hypothetical
           protein T09A12.5 protein.
          Length = 63

 Score = 51.6 bits (118), Expect = 7e-07
 Identities = 21/38 (55%), Positives = 26/38 (68%)
 Frame = +3

Query: 150 PKQRMRIANEIASKNITMRGNVPKTTKEKEEQYPVAPW 263
           PKQRM +AN   SKN+T RGNVPK  K  E ++P + W
Sbjct: 3   PKQRMAVANAQFSKNVTQRGNVPKGNKTNESKFPTSQW 40



 Score = 33.1 bits (72), Expect = 0.27
 Identities = 12/18 (66%), Positives = 17/18 (94%)
 Frame = +2

Query: 269 LALFIFVVCGSAVFQIIQ 322
           + LFIFVVCGSA+F++I+
Sbjct: 42  IGLFIFVVCGSAIFEVIR 59


>Z83125-5|CAB05622.2|  362|Caenorhabditis elegans Hypothetical
           protein T15D6.6 protein.
          Length = 362

 Score = 31.9 bits (69), Expect = 0.61
 Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = -2

Query: 209 PPHCDVFTGDLV-GDTHSLLRGPFCFVIKYICQFNNKLKGLEEPQRAISLDT*IKV 45
           P + ++  G LV G   +  R      I+Y+C+ NN+ KG+ +  RA   D  +K+
Sbjct: 17  PSNVELHFGGLVCGACAAFFRRTVSLNIRYLCEKNNQCKGMRKNCRACRFDYCVKI 72


>AC006794-5|AAK68502.1|  821|Caenorhabditis elegans Hypothetical
           protein Y50D4A.1 protein.
          Length = 821

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 17/52 (32%), Positives = 29/52 (55%)
 Frame = +3

Query: 36  LRFDFYLRVKRNCALWLFESF*FIIKLTNILYNKTKWPPKQRMRIANEIASK 191
           LR +F L++K +C LW ++      K+  +   KT++    +  IAN +ASK
Sbjct: 384 LRREFPLQIKLHCLLWSYKRLDVWEKIC-VEEGKTRYETVLKSEIANPLASK 434


>Z81130-7|CAE17967.1|  199|Caenorhabditis elegans Hypothetical
           protein T23G11.10 protein.
          Length = 199

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 16/51 (31%), Positives = 29/51 (56%)
 Frame = +1

Query: 133 TKQNGPLSRECVSPTRSPVKTSQ*GGMYPKLPRKKKNNILWHPGLLGSLHL 285
           +K+N  +++E   P    VKT + GG++PK    K N++ W P  + + +L
Sbjct: 131 SKKNAEIAKERFGP----VKTLKMGGVFPK---NKANSVFWSPADIVAFNL 174


>Z81492-3|CAB04030.1|  382|Caenorhabditis elegans Hypothetical
           protein E03H4.6 protein.
          Length = 382

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
 Frame = -2

Query: 209 PPHCDVFTGDLV-GDTHSLLRGPFCFVIKYICQFNNKLKGLEEPQRAISLDT*IKV 45
           P + ++  G LV G   +  R      I+Y+C+  N+ KG  +  RA   D  +K+
Sbjct: 71  PSNVELHFGGLVCGACAAFFRRTVSLNIRYLCEKKNQCKGKRKNCRACRFDYCVKI 126


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,083,617
Number of Sequences: 27780
Number of extensions: 362026
Number of successful extensions: 705
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 705
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)