Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP06_F_M16
(870 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 24 1.6
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.7
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.7
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.7
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.7
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.7
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.7
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 3.7
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 3.7
EF032397-1|ABM97933.1| 200|Apis mellifera arginine kinase protein. 22 6.4
AF393494-1|AAL60419.1| 144|Apis mellifera odorant binding prote... 22 6.4
AF166496-1|AAD51944.1| 144|Apis mellifera pheromone-binding pro... 22 6.4
AF023619-1|AAC39040.1| 355|Apis mellifera arginine kinase protein. 22 6.4
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 6.4
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 6.4
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 24.2 bits (50), Expect = 1.6
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = -3
Query: 241 SSFSLVVLGTFPLIVMFLLAISLAIRILCLGGH 143
+S ++ +LGT+ +MF++A S+ IL L H
Sbjct: 287 TSDAVPLLGTYFNCIMFMVASSVVSTILILNYH 319
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 23.0 bits (47), Expect = 3.7
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -3
Query: 235 FSLVVLGTFPLIVMFLLAISLAIRILCLGGHFVL 134
F+ +V+ LIV L + I ILC H ++
Sbjct: 427 FAAMVVDRLCLIVFTLFTVLATIVILCRAPHIIV 460
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 23.0 bits (47), Expect = 3.7
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -3
Query: 235 FSLVVLGTFPLIVMFLLAISLAIRILCLGGHFVL 134
F+ +V+ LIV L + I ILC H ++
Sbjct: 427 FAAMVVDRLCLIVFTLFTVLATIVILCRAPHIIV 460
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 23.0 bits (47), Expect = 3.7
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -3
Query: 235 FSLVVLGTFPLIVMFLLAISLAIRILCLGGHFVL 134
F+ +V+ LIV L + I ILC H ++
Sbjct: 427 FAAMVVDRLCLIVFTLFTVLATIVILCRAPHIIV 460
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 23.0 bits (47), Expect = 3.7
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -3
Query: 235 FSLVVLGTFPLIVMFLLAISLAIRILCLGGHFVL 134
F+ +V+ LIV L + I ILC H ++
Sbjct: 427 FAAMVVDRLCLIVFTLFTVLATIVILCRAPHIIV 460
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 23.0 bits (47), Expect = 3.7
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -3
Query: 235 FSLVVLGTFPLIVMFLLAISLAIRILCLGGHFVL 134
F+ +V+ LIV L + I ILC H ++
Sbjct: 427 FAAMVVDRLCLIVFTLFTVLATIVILCRAPHIIV 460
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 23.0 bits (47), Expect = 3.7
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -3
Query: 235 FSLVVLGTFPLIVMFLLAISLAIRILCLGGHFVL 134
F+ +V+ LIV L + I ILC H ++
Sbjct: 427 FAAMVVDRLCLIVFTLFTVLATIVILCRAPHIIV 460
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.0 bits (47), Expect = 3.7
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -3
Query: 235 FSLVVLGTFPLIVMFLLAISLAIRILCLGGHFVL 134
F+ +V+ LIV L + I ILC H ++
Sbjct: 495 FAAMVVDRLCLIVFTLFTVLATIVILCRAPHIIV 528
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.0 bits (47), Expect = 3.7
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -3
Query: 235 FSLVVLGTFPLIVMFLLAISLAIRILCLGGHFVL 134
F+ +V+ LIV L + I ILC H ++
Sbjct: 495 FAAMVVDRLCLIVFTLFTVLATIVILCRAPHIIV 528
>EF032397-1|ABM97933.1| 200|Apis mellifera arginine kinase protein.
Length = 200
Score = 22.2 bits (45), Expect = 6.4
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -3
Query: 541 GVPFNPCKCERDIK 500
G PFNPC E K
Sbjct: 116 GYPFNPCLTEAQYK 129
>AF393494-1|AAL60419.1| 144|Apis mellifera odorant binding protein
ASP1 protein.
Length = 144
Score = 22.2 bits (45), Expect = 6.4
Identities = 7/19 (36%), Positives = 14/19 (73%)
Frame = +1
Query: 742 DQGNLIHNPQMSRFPYILV 798
D+GNL++ P ++ + Y L+
Sbjct: 60 DKGNLVNEPSITCYMYCLL 78
>AF166496-1|AAD51944.1| 144|Apis mellifera pheromone-binding
protein ASP1 protein.
Length = 144
Score = 22.2 bits (45), Expect = 6.4
Identities = 7/19 (36%), Positives = 14/19 (73%)
Frame = +1
Query: 742 DQGNLIHNPQMSRFPYILV 798
D+GNL++ P ++ + Y L+
Sbjct: 60 DKGNLVNEPSITCYMYCLL 78
>AF023619-1|AAC39040.1| 355|Apis mellifera arginine kinase protein.
Length = 355
Score = 22.2 bits (45), Expect = 6.4
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -3
Query: 541 GVPFNPCKCERDIK 500
G PFNPC E K
Sbjct: 132 GYPFNPCLTEAQYK 145
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 22.2 bits (45), Expect = 6.4
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -2
Query: 812 YYLHYTRIYGNLD 774
Y LHY +GNLD
Sbjct: 1437 YTLHYRTAHGNLD 1449
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 22.2 bits (45), Expect = 6.4
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -2
Query: 812 YYLHYTRIYGNLD 774
Y LHY +GNLD
Sbjct: 1433 YTLHYRTAHGNLD 1445
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 231,678
Number of Sequences: 438
Number of extensions: 4994
Number of successful extensions: 18
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28159464
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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