Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP06_F_M15
         (1174 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0489 - 18031187-18031579,18032033-18034030,18034102-180342...    30   3.1  
04_03_0689 + 18746735-18748296,18748401-18748485                       30   4.1  

>09_04_0489 -
           18031187-18031579,18032033-18034030,18034102-18034234,
           18035360-18036108
          Length = 1090

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -3

Query: 566 PNFSLVPGLAPNPQPGPLVRPS*PSQLGGFPVLP 465
           P+F+  P +AP PQP  L+ P+  + +   P LP
Sbjct: 113 PSFASPPQIAPQPQPQTLITPAIAAAVTPAPSLP 146


>04_03_0689 + 18746735-18748296,18748401-18748485
          Length = 548

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 14/33 (42%), Positives = 15/33 (45%)
 Frame = -3

Query: 536 PNPQPGPLVRPS*PSQLGGFPVLPLFQMNSKGL 438
           PN  P P  RP  P Q GG P  PL  +    L
Sbjct: 9   PNSTPTPQPRPPQPQQQGGSPATPLGHLRPPSL 41


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,543,832
Number of Sequences: 37544
Number of extensions: 648802
Number of successful extensions: 1377
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1372
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3584899172
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)